RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 TRIM55Q9BYV6 548 aa13.01□□□□□ -0.33
PRPF6-201ENST00000266079 REV3LO60673 3130 aa13.01□□□□□ -0.33
PRPF6-201ENST00000266079 FNDC1Q4ZHG4 1894 aaPredicted RBP13□□□□□ -0.33
PRPF6-201ENST00000266079 M0QZQ0 153 aa13□□□□□ -0.33
PRPF6-201ENST00000266079 CAPN15O75808 1086 aa13□□□□□ -0.33
PRPF6-201ENST00000266079 ANPEPP15144 967 aa13□□□□□ -0.33
PRPF6-201ENST00000266079 BDNFP23560 247 aa13□□□□□ -0.33
PRPF6-201ENST00000266079 PGM1P36871 562 aa13□□□□□ -0.33
PRPF6-201ENST00000266079 LHX1P48742 406 aa13□□□□□ -0.33
PRPF6-201ENST00000266079 ARFIP2P53365 341 aa13□□□□□ -0.33
PRPF6-201ENST00000266079 MAP3K7CLP57077 242 aa13□□□□□ -0.33
PRPF6-201ENST00000266079 CTXN3Q4LDR2 81 aa13□□□□□ -0.33
PRPF6-201ENST00000266079 SLC39A12Q504Y0 691 aa13□□□□□ -0.33
PRPF6-201ENST00000266079 PMF1Q6P1K2 205 aa13□□□□□ -0.33
PRPF6-201ENST00000266079 PSRC1Q6PGN9 363 aaPredicted RBP13□□□□□ -0.33
PRPF6-201ENST00000266079 ZNF677Q86XU0 584 aa13□□□□□ -0.33
PRPF6-201ENST00000266079 MCOLN2Q8IZK6 566 aa13□□□□□ -0.33
PRPF6-201ENST00000266079 SKA1Q96BD8 255 aa13□□□□□ -0.33
PRPF6-201ENST00000266079 TMEM169Q96HH4 297 aa13□□□□□ -0.33
PRPF6-201ENST00000266079 MAK16Q9BXY0 300 aaKnown RBP13□□□□□ -0.33
PRPF6-201ENST00000266079 OSBPL8Q9BZF1 889 aa13□□□□□ -0.33
PRPF6-201ENST00000266079 CERS4Q9HA82 394 aa13□□□□□ -0.33
PRPF6-201ENST00000266079 SSU72Q9NP77 194 aaKnown RBP13□□□□□ -0.33
PRPF6-201ENST00000266079 TMEM30AQ9NV96 361 aa13□□□□□ -0.33
PRPF6-201ENST00000266079 ABI2Q9NYB9 513 aaPredicted RBP13□□□□□ -0.33
PRPF6-201ENST00000266079 SF3B1O75533 1304 aaKnown RBP eCLIP13□□□□□ -0.336e-7■■■■■ 113.6
PRPF6-201ENST00000266079 SOAT2O75908 522 aa13□□□□□ -0.33
PRPF6-201ENST00000266079 BAIAP3O94812 1187 aa13□□□□□ -0.33
PRPF6-201ENST00000266079 SETSIPP0DME0 302 aa13□□□□□ -0.33
PRPF6-201ENST00000266079 ETS2P15036 469 aa13□□□□□ -0.33
PRPF6-201ENST00000266079 SCNN1BP51168 640 aa13□□□□□ -0.33
PRPF6-201ENST00000266079 ZBTB16Q05516 673 aa13□□□□□ -0.33
PRPF6-201ENST00000266079 SDHAF4Q5VUM1 108 aa13□□□□□ -0.33
PRPF6-201ENST00000266079 RSPO2Q6UXX9 243 aaPredicted RBP13□□□□□ -0.33
PRPF6-201ENST00000266079 ST13P4Q8IZP2 240 aaPredicted RBP13□□□□□ -0.33
PRPF6-201ENST00000266079 MYLPFQ96A32 169 aa13□□□□□ -0.33
PRPF6-201ENST00000266079 ZNF689Q96CS4 500 aaPredicted RBP13□□□□□ -0.33
PRPF6-201ENST00000266079 PRR11Q96HE9 360 aaPredicted RBP13□□□□□ -0.33
PRPF6-201ENST00000266079 PIWIL1Q96J94 861 aaKnown RBP13□□□□□ -0.33
PRPF6-201ENST00000266079 VN1R3Q9BXE9 311 aa13□□□□□ -0.33
PRPF6-201ENST00000266079 MTO1Q9Y2Z2 717 aaKnown RBP13□□□□□ -0.33
PRPF6-201ENST00000266079 E5RJQ4 531 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 PABPC4LP0CB38 370 aaKnown RBP12.99□□□□□ -0.33
PRPF6-201ENST00000266079 LCP1P13796 627 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 CPB1P15086 417 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 CRABP2P29373 138 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 SERPINB3P29508 390 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 GPD2P43304 727 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 CDK16Q00536 496 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 SHHQ15465 462 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 HERC6Q8IVU3 1022 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 SCUBE3Q8IX30 993 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 CRYBG2Q8N1P7 616 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 TMEM86AQ8N2M4 240 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 ZNF276Q8N554 614 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 GPR152Q8TDT2 470 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 PPP2R3CQ969Q6 453 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 IGSF21Q96ID5 467 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 HIC2Q96JB3 615 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 ZNF558Q96NG5 402 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 WDR91A4D1P6 747 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 MAGEC1O60732 1142 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 ADRA1DP25100 572 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 PCSK1P29120 753 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 RASA2Q15283 850 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 CCNG2Q16589 344 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 LCLAT1Q6UWP7 414 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 PAQR9Q6ZVX9 377 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 LIMS2Q7Z4I7 341 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 THEM5Q8N1Q8 247 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 TTC9BQ8N6N2 239 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.99□□□□□ -0.33
PRPF6-201ENST00000266079 ATAD1Q8NBU5 361 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 MIPOL1Q8TD10 442 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 NAT14Q8WUY8 206 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 FBXO6Q9NRD1 293 aaPredicted RBP12.99□□□□□ -0.33
PRPF6-201ENST00000266079 SLC24A2Q9UI40 661 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 PCDHB8Q9UN66 801 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 ADAM12O43184 909 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 EFCAB14O75071 495 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 ARHGEF15O94989 841 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 ERBB2P04626 1255 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 SPATA31D3P0C874 917 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 CYP2F1P24903 491 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 TSPY1Q01534 308 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 TAF5Q15542 800 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 P3H1Q32P28 736 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 SPATA31D4Q6ZUB0 917 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 SCN4BQ8IWT1 228 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 FIBCD1Q8N539 461 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 TTC39CQ8N584 583 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 EMC1Q8N766 993 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 CLEC4CQ8WTT0 213 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 FAM161BQ96MY7 647 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 PPCSQ9HAB8 311 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 RC3H2Q9HBD1 1191 aaKnown RBP12.99□□□□□ -0.33
PRPF6-201ENST00000266079 ALG13Q9NP73 1137 aaKnown RBP12.99□□□□□ -0.33
PRPF6-201ENST00000266079 TRANK1O15050 2925 aa12.99□□□□□ -0.33
PRPF6-201ENST00000266079 RNASEH1O60930 286 aaKnown RBP12.98□□□□□ -0.33
PRPF6-201ENST00000266079 FAM200BP0CF97 657 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms