RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 CCR10P46092 362 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 RNF111Q6ZNA4 994 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 GK5Q6ZS86 529 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 EEPD1Q7L9B9 569 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 MARCH7Q9H992 704 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 ZFYVE28Q9HCC9 887 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 MRPL42Q9Y6G3 142 aaKnown RBP16.66■□□□□ 0.26
GPC1-201ENST00000264039 A0A096LPK6 155 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 APOC4-APOC2K7ER74 178 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 MFN2O95140 757 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 APOC2P02655 101 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 CHRNGP07510 517 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 IL1R2P27930 398 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 TPTEP56180 551 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 ZNF667Q5HYK9 610 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 KCNT2Q6UVM3 1135 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 AFAP1L2Q8N4X5 818 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 LINC00116Q8NCU8 138 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 PGLYRP2Q96PD5 576 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 GAKO14976 1311 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 CCNT2O60583 730 aaKnown RBP16.66■□□□□ 0.26
GPC1-201ENST00000264039 TSPAN8P19075 237 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 SDC4P31431 198 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 IREB2P48200 963 aaKnown RBP16.66■□□□□ 0.26
GPC1-201ENST00000264039 CLCN2P51788 898 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 NDST2P52849 883 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 PDCD4Q53EL6 469 aaKnown RBP16.66■□□□□ 0.26
GPC1-201ENST00000264039 DCAF6Q58WW2 860 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 BBS12Q6ZW61 710 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 KRT27Q7Z3Y8 459 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 ELMO1Q92556 727 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 SOX17Q9H6I2 414 aaPredicted RBP16.66■□□□□ 0.26
GPC1-201ENST00000264039 UBP1Q9NZI7 540 aa16.66■□□□□ 0.26
GPC1-201ENST00000264039 IQCA1LA6NCM1 817 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 CNOT3O75175 753 aaKnown RBP16.65■□□□□ 0.26
GPC1-201ENST00000264039 LRCH4O75427 683 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 ZNF24P17028 368 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 MRPS5P82675 430 aaKnown RBP16.65■□□□□ 0.26
GPC1-201ENST00000264039 UGCGQ16739 394 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 ZBTB41Q5SVQ8 909 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 SH3PXD2AQ5TCZ1 1133 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 ADCK1Q86TW2 530 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 CBR4Q8N4T8 237 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 HTRA1Q92743 480 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 CCDC88AQ3V6T2 1871 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 SF3B1O75533 1304 aaKnown RBP eCLIP16.65■□□□□ 0.26
GPC1-201ENST00000264039 FUOMA2VDF0 154 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 TMX2-CTNND1H3BSU7 103 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 TRIM13O60858 407 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 DAB2P98082 770 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 DLGAP5Q15398 846 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 SLC15A2Q16348 729 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 TEDDM1Q5T9Z0 273 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 THOC7Q6I9Y2 204 aaKnown RBP16.65■□□□□ 0.26
GPC1-201ENST00000264039 DENND1BQ6P3S1 775 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 ZCCHC7Q8N3Z6 543 aaKnown RBP16.65■□□□□ 0.26
GPC1-201ENST00000264039 MARVELD2Q8N4S9 558 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 RXFP2Q8WXD0 754 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 SENP6Q9GZR1 1112 aaPredicted RBP16.65■□□□□ 0.26
GPC1-201ENST00000264039 SNX5Q9Y5X3 404 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 KCNU1A8MYU2 1149 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 INPP4BO15327 924 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 RNASEH2AO75792 299 aaKnown RBP16.65■□□□□ 0.26
GPC1-201ENST00000264039 SMIM18P0DKX4 95 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 SNHG28P0DPA3 235 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 TPH1P17752 444 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 ALDH4A1P30038 563 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 SNX29P2Q8IUI4 249 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 SULF1Q8IWU6 871 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 IL31RAQ8NI17 732 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 NCSTNQ92542 709 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 ARHGEF1Q92888 912 aaKnown RBP16.65■□□□□ 0.26
GPC1-201ENST00000264039 SLC39A3Q9BRY0 314 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 ZBED2Q9BTP6 218 aa16.65■□□□□ 0.26
GPC1-201ENST00000264039 ATP8B3O60423 1300 aa16.64■□□□□ 0.25
GPC1-201ENST00000264039 NFIBO00712 420 aa16.64■□□□□ 0.25
GPC1-201ENST00000264039 SLC26A4O43511 780 aa16.64■□□□□ 0.25
GPC1-201ENST00000264039 COL6A2P12110 1019 aa16.64■□□□□ 0.25
GPC1-201ENST00000264039 MMP8P22894 467 aa16.64■□□□□ 0.25
GPC1-201ENST00000264039 PSME3P61289 254 aa16.64■□□□□ 0.25
GPC1-201ENST00000264039 SLC18A2Q05940 514 aa16.64■□□□□ 0.25
GPC1-201ENST00000264039 MYBPC2Q14324 1141 aa16.64■□□□□ 0.25
GPC1-201ENST00000264039 FGD3Q5JSP0 725 aa16.64■□□□□ 0.25
GPC1-201ENST00000264039 ARCQ7LC44 396 aa16.64■□□□□ 0.25
GPC1-201ENST00000264039 TMEM161BQ8NDZ6 487 aa16.64■□□□□ 0.25
GPC1-201ENST00000264039 SLC35B2Q8TB61 432 aa16.64■□□□□ 0.25
GPC1-201ENST00000264039 LPGAT1Q92604 370 aa16.64■□□□□ 0.25
GPC1-201ENST00000264039 SDCCAG3Q96C92 435 aa16.64■□□□□ 0.25
GPC1-201ENST00000264039 POLLQ9UGP5 575 aa16.64■□□□□ 0.25
GPC1-201ENST00000264039 HEATR9A2RTY3 570 aa16.64■□□□□ 0.25
GPC1-201ENST00000264039 ZBTB14O43829 449 aa16.64■□□□□ 0.25
GPC1-201ENST00000264039 OXSR1O95747 527 aaPredicted RBP16.64■□□□□ 0.25
GPC1-201ENST00000264039 ARL4AP40617 200 aa16.64■□□□□ 0.25
GPC1-201ENST00000264039 CDK9P50750 372 aaKnown RBP16.64■□□□□ 0.25
GPC1-201ENST00000264039 BCAP31P51572 246 aa16.64■□□□□ 0.25
GPC1-201ENST00000264039 PTPN20Q4JDL3 420 aa16.64■□□□□ 0.25
GPC1-201ENST00000264039 RELL1Q8IUW5 271 aa16.64■□□□□ 0.25
GPC1-201ENST00000264039 TMC2Q8TDI7 906 aa16.64■□□□□ 0.25
GPC1-201ENST00000264039 NLRP4Q96MN2 994 aa16.64■□□□□ 0.25
GPC1-201ENST00000264039 FRMD8Q9BZ67 464 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms