RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 TBC1D31Q96DN5 1066 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 HES6Q96HZ4 224 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 RPRD1AQ96P16 312 aaPredicted RBP14.55□□□□□ -0.08
VPS25-201ENST00000253794 ALS2CR12Q96Q35 445 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 ZNF670Q9BS34 389 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 BBS2Q9BXC9 721 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 ZYG11BQ9C0D3 744 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 DHX35Q9H5Z1 703 aaKnown RBP14.55□□□□□ -0.08
VPS25-201ENST00000253794 ZWILCHQ9H900 591 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 PCDH18Q9HCL0 1135 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 GPATCH2LQ9NWQ4 482 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 MUTYHQ9UIF7 546 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 AMFRQ9UKV5 643 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 TBC1D30Q9Y2I9 924 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 SLC27A6Q9Y2P4 619 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 HYOU1Q9Y4L1 999 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 PCDHA3Q9Y5H8 950 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 SNX10Q9Y5X0 201 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 TRIOO75962 3097 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 C3orf70A6NLC5 250 aaPredicted RBP14.54□□□□□ -0.08
VPS25-201ENST00000253794 NEDD8-MDP1E9PL57 170 aa14.54□□□□□ -0.08
VPS25-201ENST00000253794 SPECC1L-ADORA2AF8WAN1 911 aa14.54□□□□□ -0.08
VPS25-201ENST00000253794 TRDMT1O14717 391 aaKnown RBP14.54□□□□□ -0.08
VPS25-201ENST00000253794 TSPAN3O60637 253 aa14.54□□□□□ -0.08
VPS25-201ENST00000253794 LUC7L3O95232 432 aaKnown RBP14.54□□□□□ -0.08
VPS25-201ENST00000253794 RHOQP17081 205 aa14.54□□□□□ -0.08
VPS25-201ENST00000253794 IL4RP24394 825 aa14.54□□□□□ -0.08
VPS25-201ENST00000253794 CTHP32929 405 aa14.54□□□□□ -0.08
VPS25-201ENST00000253794 GGCXP38435 758 aa14.54□□□□□ -0.08
VPS25-201ENST00000253794 OPRD1P41143 372 aa14.54□□□□□ -0.08
VPS25-201ENST00000253794 PEX5P50542 639 aa14.54□□□□□ -0.08
VPS25-201ENST00000253794 ZXDAP98168 799 aa14.54□□□□□ -0.08
VPS25-201ENST00000253794 DPYSQ14117 519 aa14.54□□□□□ -0.08
VPS25-201ENST00000253794 ATP13A4Q4VNC1 1196 aa14.54□□□□□ -0.08
VPS25-201ENST00000253794 SLC44A4Q53GD3 710 aa14.54□□□□□ -0.08
VPS25-201ENST00000253794 PEX26Q7Z412 305 aa14.54□□□□□ -0.08
VPS25-201ENST00000253794 KIAA0907Q7Z7F0 614 aaPredicted RBP14.54□□□□□ -0.08
VPS25-201ENST00000253794 MAP7D3Q8IWC1 876 aa14.54□□□□□ -0.08
VPS25-201ENST00000253794 SUGP1Q8IWZ8 645 aaKnown RBP14.54□□□□□ -0.08
VPS25-201ENST00000253794 PHTF2Q8N3S3 785 aa14.54□□□□□ -0.08
VPS25-201ENST00000253794 FIBINQ8TAL6 211 aa14.54□□□□□ -0.08
VPS25-201ENST00000253794 DDI1Q8WTU0 396 aa14.54□□□□□ -0.08
VPS25-201ENST00000253794 HSPH1Q92598 858 aa14.54□□□□□ -0.08
VPS25-201ENST00000253794 LMLNQ96KR4 655 aa14.54□□□□□ -0.08
VPS25-201ENST00000253794 XPO6Q96QU8 1125 aaKnown RBP14.54□□□□□ -0.08
VPS25-201ENST00000253794 PRDM16Q9HAZ2 1276 aa14.54□□□□□ -0.08
VPS25-201ENST00000253794 HEBP1Q9NRV9 189 aa14.54□□□□□ -0.08
VPS25-201ENST00000253794 TMEM248Q9NWD8 314 aa14.54□□□□□ -0.08
VPS25-201ENST00000253794 CWC15Q9P013 229 aaKnown RBP14.54□□□□□ -0.08
VPS25-201ENST00000253794 ZKSCAN5Q9Y2L8 839 aa14.54□□□□□ -0.08
VPS25-201ENST00000253794 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.54□□□□□ -0.08
VPS25-201ENST00000253794 PIAS3Q9Y6X2 628 aa14.54□□□□□ -0.08
VPS25-201ENST00000253794 TICRRQ7Z2Z1 1910 aa14.54□□□□□ -0.08
VPS25-201ENST00000253794 KIAA1549LQ6ZVL6 1849 aa14.53□□□□□ -0.08
VPS25-201ENST00000253794 A0A0A0MRY4 1105 aa14.53□□□□□ -0.08
VPS25-201ENST00000253794 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.53□□□□□ -0.08
VPS25-201ENST00000253794 H3BRJ5 948 aa14.53□□□□□ -0.08
VPS25-201ENST00000253794 EEF2KO00418 725 aaKnown RBP14.53□□□□□ -0.08
VPS25-201ENST00000253794 TBL1XO60907 577 aa14.53□□□□□ -0.08
VPS25-201ENST00000253794 TULP3O75386 442 aa14.53□□□□□ -0.08
VPS25-201ENST00000253794 CISD3P0C7P0 127 aa14.53□□□□□ -0.08
VPS25-201ENST00000253794 KDELR1P24390 212 aa14.53□□□□□ -0.08
VPS25-201ENST00000253794 SSR1P43307 286 aaKnown RBP14.53□□□□□ -0.08
VPS25-201ENST00000253794 MAPKAPK2P49137 400 aa14.53□□□□□ -0.08
VPS25-201ENST00000253794 IRAK1P51617 712 aa14.53□□□□□ -0.08
VPS25-201ENST00000253794 CDH6P55285 790 aa14.53□□□□□ -0.08
VPS25-201ENST00000253794 TPI1P60174 286 aa14.53□□□□□ -0.08
VPS25-201ENST00000253794 DPYSL3Q14195 570 aa14.53□□□□□ -0.08
VPS25-201ENST00000253794 MLF2Q15773 248 aaPredicted RBP14.53□□□□□ -0.08
VPS25-201ENST00000253794 ANO4Q32M45 955 aa14.53□□□□□ -0.08
VPS25-201ENST00000253794 ALFQ53S48 1182 aa14.53□□□□□ -0.08
VPS25-201ENST00000253794 MEI1Q5TIA1 1274 aa14.53□□□□□ -0.08
VPS25-201ENST00000253794 ZNF783Q6ZMS7 281 aa14.53□□□□□ -0.08
VPS25-201ENST00000253794 RFX8Q6ZV50 586 aa14.53□□□□□ -0.08
VPS25-201ENST00000253794 SETD3Q86TU7 594 aaPredicted RBP14.53□□□□□ -0.08
VPS25-201ENST00000253794 C12orf40Q86WS4 652 aa14.53□□□□□ -0.08
VPS25-201ENST00000253794 CFAP52Q8N1V2 620 aa14.53□□□□□ -0.08
VPS25-201ENST00000253794 EXD1Q8NHP7 514 aa14.53□□□□□ -0.08
VPS25-201ENST00000253794 KRT35Q92764 455 aa14.53□□□□□ -0.08
VPS25-201ENST00000253794 EXOC4Q96A65 974 aa14.53□□□□□ -0.08
VPS25-201ENST00000253794 CSPG4P5Q96PW8 444 aa14.53□□□□□ -0.08
VPS25-201ENST00000253794 ARHGEF3Q9NR81 526 aa14.53□□□□□ -0.08
VPS25-201ENST00000253794 TRMT1Q9NXH9 659 aaKnown RBP14.53□□□□□ -0.08
VPS25-201ENST00000253794 DONSONQ9NYP3 566 aa14.53□□□□□ -0.08
VPS25-201ENST00000253794 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.53□□□□□ -0.08
VPS25-201ENST00000253794 MAN2B1O00754 1011 aa14.52□□□□□ -0.09
VPS25-201ENST00000253794 DDX3YO15523 660 aaKnown RBP14.52□□□□□ -0.09
VPS25-201ENST00000253794 DCXO43602 365 aa14.52□□□□□ -0.09
VPS25-201ENST00000253794 CREB3O43889 395 aa14.52□□□□□ -0.09
VPS25-201ENST00000253794 KIF5CO60282 957 aa14.52□□□□□ -0.09
VPS25-201ENST00000253794 SRGAP2O75044 1071 aa14.52□□□□□ -0.09
VPS25-201ENST00000253794 CNTN5O94779 1100 aa14.52□□□□□ -0.09
VPS25-201ENST00000253794 FTCDO95954 541 aa14.52□□□□□ -0.09
VPS25-201ENST00000253794 CD48P09326 243 aa14.52□□□□□ -0.09
VPS25-201ENST00000253794 GOT1P17174 413 aa14.52□□□□□ -0.09
VPS25-201ENST00000253794 EPHB2P29323 1055 aa14.52□□□□□ -0.09
VPS25-201ENST00000253794 PTPN7P35236 360 aa14.52□□□□□ -0.09
VPS25-201ENST00000253794 ARL4AP40617 200 aa14.52□□□□□ -0.09
VPS25-201ENST00000253794 MARCKSL1P49006 195 aa14.52□□□□□ -0.09
VPS25-201ENST00000253794 OXCT1P55809 520 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms