RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 RAB44Q7Z6P3 723 aaPredicted RBP4.25□□□□□ -1.73
UBE4A-201ENST00000252108 TMEM110Q86TL2 294 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 CAND1Q86VP6 1230 aaKnown RBP4.25□□□□□ -1.73
UBE4A-201ENST00000252108 NT5DC4Q86YG4 428 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 GDPD5Q8WTR4 605 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 IRGQQ8WZA9 623 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 RTKNQ9BST9 563 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 TRIM62Q9BVG3 475 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 TARS2Q9BW92 718 aaKnown RBP4.25□□□□□ -1.73
UBE4A-201ENST00000252108 SPATA16Q9BXB7 569 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 MRPL1Q9BYD6 325 aaKnown RBP4.25□□□□□ -1.73
UBE4A-201ENST00000252108 ILKAPQ9H0C8 392 aaPredicted RBP4.25□□□□□ -1.73
UBE4A-201ENST00000252108 CDT1Q9H211 546 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 SMYD3Q9H7B4 428 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 DDX43Q9NXZ2 648 aaKnown RBP4.25□□□□□ -1.73
UBE4A-201ENST00000252108 MORF4L1Q9UBU8 362 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 ASB3Q9Y575 518 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 TTC36A6NLP5 189 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 C16orf96A6NNT2 1141 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 H0YJX3 145 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 KLHL41O60662 606 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 GPR32O75388 356 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 POLBP06746 335 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 LINGO3P0C6S8 592 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 VDRP11473 427 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 VAV1P15498 845 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 TPSB2P20231 275 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 IL10P22301 178 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 HMOX2P30519 316 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 SERPINB5P36952 375 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 TPD52P55327 224 aaPredicted RBP4.25□□□□□ -1.73
UBE4A-201ENST00000252108 OCA2Q04671 838 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 LAMTOR4Q0VGL1 99 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 PPIL2Q13356 520 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 TPSAB1Q15661 275 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 THEMIS2Q5TEJ8 643 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 GRAMD4Q6IC98 578 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 OR6B2Q6IFH4 312 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 DLK2Q6UY11 383 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 EFL1Q7Z2Z2 1120 aaKnown RBP4.25□□□□□ -1.73
UBE4A-201ENST00000252108 DEFB132Q7Z7B7 95 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 PCYOX1LQ8NBM8 494 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 SKA1Q96BD8 255 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 C10orf88Q9H8K7 445 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 PLGRKTQ9HBL7 147 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 SMYD2Q9NRG4 433 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 METTL5Q9NRN9 209 aaKnown RBP4.25□□□□□ -1.73
UBE4A-201ENST00000252108 ZDHHC7Q9NXF8 308 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 LMCD1Q9NZU5 365 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 TTLL3Q9Y4R7 772 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 PTPRSQ13332 1948 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 SDR42E2A6NKP2 422 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 HNRNPCP07910 306 aaKnown RBP eCLIP4.25□□□□□ -1.73
UBE4A-201ENST00000252108 KRT10P13645 584 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 L1CAMP32004 1257 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 ARRB2P32121 409 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 ARL1P40616 181 aaPredicted RBP4.25□□□□□ -1.73
UBE4A-201ENST00000252108 DPYSL3Q14195 570 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 FLOT2Q14254 428 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 EFTUD2Q15029 972 aaKnown RBP eCLIP4.25□□□□□ -1.73
UBE4A-201ENST00000252108 SNX17Q15036 470 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 PRKD1Q15139 912 aaPredicted RBP4.25□□□□□ -1.73
UBE4A-201ENST00000252108 SLC44A4Q53GD3 710 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 FNBP1LQ5T0N5 605 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 IER5Q5VY09 327 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 DENND1BQ6P3S1 775 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 AHI1Q8N157 1196 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 KLHL23Q8NBE8 558 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 KYQ8NBH2 561 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 NLGN2Q8NFZ4 835 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 NAT14Q8WUY8 206 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 SLC35F5Q8WV83 523 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 WDR60Q8WVS4 1066 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 MAGED4Q96JG8 741 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 NLRP4Q96MN2 994 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 SPATC1LQ9H0A9 340 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 ARL8BQ9NVJ2 186 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 FBXL21Q9UKT6 434 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 CDYLQ9Y232 598 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 PLLPQ9Y342 182 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 RAD54BQ9Y620 910 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 DENND4CQ5VZ89 1909 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 ERI2A8K979 691 aaKnown RBP4.25□□□□□ -1.73
UBE4A-201ENST00000252108 PI4K2BG5E9Z4 385 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 GOLGA8MH3BSY2 632 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 OGTO15294 1046 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 B4GALT5O43286 388 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 SNNO75324 88 aaPredicted RBP4.25□□□□□ -1.73
UBE4A-201ENST00000252108 KRT19P08727 400 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 CD48P09326 243 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 ALOX15P16050 662 aaPredicted RBP4.25□□□□□ -1.73
UBE4A-201ENST00000252108 AOC1P19801 751 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 KDELR1P24390 212 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 MRPS5P82675 430 aaKnown RBP4.25□□□□□ -1.73
UBE4A-201ENST00000252108 PRKAA1Q13131 559 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 SPIDRQ14159 915 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 HERC3Q15034 1050 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 PDK1Q15118 436 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 PDK3Q15120 406 aa4.25□□□□□ -1.73
UBE4A-201ENST00000252108 NOMO1Q15155 1222 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms