RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 TMEM109Q9BVC6 243 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 GSTM1P09488 218 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 AVPR1AP37288 418 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 CAPGP40121 348 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 C5orf22Q49AR2 442 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 KCNMB4Q86W47 210 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 DCP1BQ8IZD4 617 aaKnown RBP8.39□□□□□ -1.07
APOB-201ENST00000233242 TEKT5Q96M29 485 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 RIBC2Q9H4K1 309 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 ABCB10Q9NRK6 738 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 WDR70Q9NW82 654 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 KLHL28Q9NXS3 571 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 CLTCL1P53675 1640 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 ZC3H4Q9UPT8 1303 aaKnown RBP8.39□□□□□ -1.07
APOB-201ENST00000233242 NEXMIFQ5QGS0 1516 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 MYH10P35580 1976 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 TRAFD1O14545 582 aaPredicted RBP8.38□□□□□ -1.07
APOB-201ENST00000233242 GPSM2P81274 684 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 PIWIL4Q7Z3Z4 852 aaKnown RBP8.38□□□□□ -1.07
APOB-201ENST00000233242 TRIM74Q86UV6 250 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 TRIM73Q86UV7 250 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 MAB21L3Q8N8X9 362 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 MASTLQ96GX5 879 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 SEMA6AQ9H2E6 1030 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 DHX33Q9H6R0 707 aaKnown RBP8.38□□□□□ -1.07
APOB-201ENST00000233242 RPS6KA4O75676 772 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 CYBBP04839 570 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 SHROOM1Q2M3G4 852 aaPredicted RBP8.38□□□□□ -1.07
APOB-201ENST00000233242 SPATA17Q96L03 361 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 UBP1Q9NZI7 540 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 SH3BP4Q9P0V3 963 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 DLC1Q96QB1 1528 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 GLRBP48167 497 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 NTRK3Q16288 839 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 CACTIN-AS1Q8N1I8 211 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 DGCR6LQ9BY27 220 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 DNAJC18Q9H819 358 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 CORO2BQ9UQ03 480 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 CHKBQ9Y259 395 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 MSH4O15457 936 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 GUCY1B2O75343 617 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 SNRPB2P08579 225 aaKnown RBP8.38□□□□□ -1.07
APOB-201ENST00000233242 PAEPP09466 180 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 ITGALP20701 1170 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 RPS7P62081 194 aaKnown RBP8.38□□□□□ -1.07
APOB-201ENST00000233242 CBX3Q13185 183 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 WDR49Q8IV35 697 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 CLPBQ9H078 707 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 BCS1LQ9Y276 419 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 TNPO3Q9Y5L0 923 aaKnown RBP8.38□□□□□ -1.07
APOB-201ENST00000233242 HDAC3O15379 428 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 ITGAVP06756 1048 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 TWF1Q12792 350 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 TYW3Q6IPR3 259 aaKnown RBP8.38□□□□□ -1.07
APOB-201ENST00000233242 ZNF624Q9P2J8 865 aaPredicted RBP8.38□□□□□ -1.07
APOB-201ENST00000233242 OGTO15294 1046 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 CYP1A2P05177 515 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 CSF1RP07333 972 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 CSHL1Q14406 222 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 CYP2R1Q6VVX0 501 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 ATP6V1HQ9UI12 483 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 MTF2Q9Y483 593 aaPredicted RBP8.38□□□□□ -1.07
APOB-201ENST00000233242 KBTBD13C9JR72 458 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 LBPP18428 481 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 SREBF1P36956 1147 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 NRF1Q16656 503 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 NDUFAF6Q330K2 333 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 LIN54Q6MZP7 749 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 TUBA3EQ6PEY2 450 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 CYP4F12Q9HCS2 524 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 FAM49BQ9NUQ9 324 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 AHSPQ9NZD4 102 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 SIK3Q9Y2K2 1263 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 NDUFB10O96000 172 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 GMFBP60983 142 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 STX4Q12846 297 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 PDCD4Q53EL6 469 aaKnown RBP8.38□□□□□ -1.07
APOB-201ENST00000233242 INTS11Q5TA45 600 aaKnown RBP8.38□□□□□ -1.07
APOB-201ENST00000233242 SALL1Q9NSC2 1324 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 ZNF221Q9UK13 617 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 LOC100506127A0A0U1RQW1 187 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 CLTBP09497 229 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 BNIP1Q12981 228 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 FBXO39Q8N4B4 442 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 B3GALT6Q96L58 329 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 SLITRK2Q9H156 845 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 S100A14Q9HCY8 104 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 SSU72Q9NP77 194 aaKnown RBP8.38□□□□□ -1.07
APOB-201ENST00000233242 ARHGAP28Q9P2N2 729 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 AP4E1Q9UPM8 1137 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 EDF1O60869 148 aaKnown RBP8.38□□□□□ -1.07
APOB-201ENST00000233242 RCVRNP35243 200 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 FLT3P36888 993 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 TBC1D21Q8IYX1 336 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 FNDC5Q8NAU1 212 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 SUN5Q8TC36 379 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 WRNIP1Q96S55 665 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 KCNH7Q9NS40 1196 aa8.38□□□□□ -1.07
APOB-201ENST00000233242 BCLAF3A2AJT9 711 aaKnown RBP8.38□□□□□ -1.07
APOB-201ENST00000233242 OPLAHO14841 1288 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms