RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 PygbQ8CI94 843 aaKnown RBP13.79□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Trip10Q8CJ53 603 aa13.79□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Abhd8Q8R0P8 439 aa13.79□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Lrp8Q924X6 996 aa13.79□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Q9D9D9 101 aa13.79□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Oxct2bQ9ESL0 520 aa13.79□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Slc13a1Q9JHI4 594 aa13.79□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Oxct2aQ9JJN4 520 aa13.79□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Fkbp1bQ9Z2I2 108 aa13.79□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Gm36028A0A0U1RPM1 299 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Fam171a2A2A699 822 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Tekt5G5E8A8 557 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Btg3P50615 252 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Fmo3P97501 534 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Ccdc127Q3TC33 260 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Ubn1Q4G0F8 1135 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Slc9b2Q5BKR2 547 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Itga3Q62470 1053 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Tubgcp5Q8BKN5 1024 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 TraipQ8VIG6 470 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Usp3Q91W36 520 aaKnown RBP13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Slc25a19Q9DAM5 318 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Mapk13Q9Z1B7 366 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Ccdc8D3YZV8 685 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Arl4cP61208 192 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 DselQ0VBN2 1207 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 UrgcpQ5NCI0 926 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Luc7l3Q5SUF2 432 aaKnown RBP13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Slc20a1Q61609 681 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Spata7Q80VP2 582 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Hspbap1Q8BK58 483 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Amz1Q8BVF9 502 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 SgczQ8BX51 311 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Atg14Q8CDJ3 492 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Gm5591Q8CDK1 855 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Snx30Q8CE50 437 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Colgalt1Q8K297 617 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Rell1Q8K2J7 272 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Ppa2Q91VM9 330 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Rabep2Q91WG2 554 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Tomm20lQ9D4V6 152 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Ripk3Q9QZL0 486 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Map3k14Q9WUL6 942 aa13.78□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Raph1F2Z3U3 1266 aa13.77□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Bmpr2O35607 1038 aa13.77□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Dsg3O35902 993 aa13.77□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Elk3P41971 409 aa13.77□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Cdo1P60334 200 aa13.77□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Stx2Q00262 289 aa13.77□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Sult1d1Q3UZZ6 295 aa13.77□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Sema3cQ62181 751 aa13.77□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Atp4aQ64436 1033 aa13.77□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Rbl2Q64700 1135 aa13.77□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Cpa4Q6P8K8 420 aa13.77□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Prpf38bQ80SY5 542 aaKnown RBP13.77□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Q9CPS8 106 aa13.77□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Dcp2Q9CYC6 422 aa13.77□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Nupr1Q9WTK0 80 aa13.77□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Slc23a1Q9Z2J0 605 aa13.77□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Kiaa0100Q5SYL3 2234 aa13.77□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Gm13212B1ASQ7 799 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 C130060K24RikG3UWA8 416 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Zfp850J3QPC5 689 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Il3P01586 166 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Kcnj6P48542 425 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Ppm1aP49443 382 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Crnkl1P63154 690 aaKnown RBP13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Kcnc2Q14B80 642 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Kctd8Q50H33 476 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Xlr3cQ61806 226 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Nuak1Q641K5 658 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Olfr1505Q7TQQ2 316 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Clec2eQ80XD9 204 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 NfascQ810U3 1240 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Slc2a12Q8BFW9 622 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Tmco6Q8BQX5 494 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Haus3Q8QZX2 570 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Q8R1Y2 203 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Rassf7Q9DD19 359 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Gm29133A0A1B0GT72 266 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Nos2P29477 1144 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Anxa5P48036 319 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 FpgsP48760 587 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Stmn2P55821 179 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 PhbP67778 272 aaKnown RBP13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 YwhahP68510 246 aaKnown RBP13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Tmem237Q3V0J1 427 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Fbxw2Q60584 422 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Sp140Q6NSQ5 534 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Hdac7Q8C2B3 938 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Hectd2Q8CDU6 774 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Lpin1Q91ZP3 924 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Txndc12Q9CQU0 170 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Tssk3Q9D2E1 268 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Krt20Q9D312 431 aa13.77□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Fam81bA0A140LI28 432 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Ifnar2O35664 513 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Mcpt4P21812 246 aa13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Apobec1P51908 229 aaKnown RBP13.76□□□□□ -0.21
Rnf4-204ENSMUST00000182047 Arl4aP61213 200 aa13.76□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 44.2 ms