RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 Tbc1d10cQ8C9V1 444 aa18.87■□□□□ 0.61
Sort1-203ENSMUST00000135636 Tmem82Q8R115 356 aa18.87■□□□□ 0.61
Sort1-203ENSMUST00000135636 Zfp655Q9CZP3 541 aaKnown RBP18.87■□□□□ 0.61
Sort1-203ENSMUST00000135636 Thap11Q9JJD0 305 aa18.87■□□□□ 0.61
Sort1-203ENSMUST00000135636 Sae1Q9R1T2 350 aa18.87■□□□□ 0.61
Sort1-203ENSMUST00000135636 Myo1cQ9WTI7 1063 aa18.87■□□□□ 0.61
Sort1-203ENSMUST00000135636 Mst1rQ62190 1378 aa18.87■□□□□ 0.61
Sort1-203ENSMUST00000135636 Hps1O08983 704 aa18.87■□□□□ 0.61
Sort1-203ENSMUST00000135636 Ptpn5P54830 541 aa18.87■□□□□ 0.61
Sort1-203ENSMUST00000135636 Galnt3P70419 633 aa18.87■□□□□ 0.61
Sort1-203ENSMUST00000135636 Etaa1Q5SVT3 877 aa18.87■□□□□ 0.61
Sort1-203ENSMUST00000135636 Cpa4Q6P8K8 420 aa18.87■□□□□ 0.61
Sort1-203ENSMUST00000135636 Olfr26Q7TRB7 308 aa18.87■□□□□ 0.61
Sort1-203ENSMUST00000135636 Olfr933Q9EQA0 308 aa18.87■□□□□ 0.61
Sort1-203ENSMUST00000135636 PfasQ5SUR0 1337 aa18.87■□□□□ 0.61
Sort1-203ENSMUST00000135636 Ccdc61Q3UJV1 511 aa18.87■□□□□ 0.61
Sort1-203ENSMUST00000135636 ParpbpQ6IRT3 573 aa18.87■□□□□ 0.61
Sort1-203ENSMUST00000135636 Noc4lQ8BHY2 516 aa18.87■□□□□ 0.61
Sort1-203ENSMUST00000135636 Tcf25Q8R3L2 676 aaKnown RBP18.87■□□□□ 0.61
Sort1-203ENSMUST00000135636 Col26a1Q91VF6 440 aa18.87■□□□□ 0.61
Sort1-203ENSMUST00000135636 Pcdhb16Q91Y03 802 aa18.87■□□□□ 0.61
Sort1-203ENSMUST00000135636 Tomm20Q9DCC8 145 aa18.87■□□□□ 0.61
Sort1-203ENSMUST00000135636 Rnf19bA2A7Q9 732 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Klhl41A2AUC9 606 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Mc4rP56450 332 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Nek10Q3UGM2 1111 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Teddm1aQ810U2 305 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Pkp2Q9CQ73 795 aaKnown RBP18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Pcdh11xF6ZNL5 1338 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Zfp990B1AVN5 605 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Rgs9O54828 675 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Lemd2Q6DVA0 511 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Decr1Q9CQ62 335 aaKnown RBP18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Dgcr8Q9EQM6 773 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 SnrpfP62307 86 aaKnown RBP18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Oas1fQ14AZ4 364 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Tcf4Q60722 670 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Grid1Q61627 1009 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Ptk6Q64434 451 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Atp2c1Q80XR2 918 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Capn7Q9R1S8 813 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Mrpl40Q9Z2Q5 206 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Abcc10Q8R4P9 1501 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Fam205a1D3YZF6 1314 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Znf711A2ANX9 761 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Itga8A2ARA8 1062 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Pgk1P09411 417 aaKnown RBP18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Crabp2P22935 138 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Ptpn1P35821 432 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Vsnl1P62761 191 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Alg11Q3TZM9 492 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Lsg1Q3UM18 644 aaKnown RBP18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Mpzl3Q3V3F6 237 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Nsun6Q7TS68 476 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Gm13119B1ARV5 481 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Fdft1P53798 416 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Krt76Q3UV17 594 aaKnown RBP18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Rasa4Q6PFQ7 802 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Ccdc59Q8R2N0 240 aaKnown RBP18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Znf24Q91VN1 368 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Duoxa2Q9D311 320 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 4930469K13RikA0A286YDB2 92 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Olfr1023A2ASU6 311 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Cct8P42932 548 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Pla2g6P97819 807 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Plekhh3Q8VCE9 796 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Dnajc14Q921R4 703 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Itga2bQ9QUM0 1033 aa18.86■□□□□ 0.61
Sort1-203ENSMUST00000135636 Gm5485A0A1D5RM98 91 aa18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 Grik3B1AS29 919 aa18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 Gm379J3QQ19 296 aa18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 Gm12794L7MTS5 483 aa18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 MaffO54791 156 aa18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 Chst3O88199 472 aa18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 Ccnb1P24860 430 aa18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 CygbQ9CX80 190 aa18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 Mfsd10Q9D2V8 456 aaKnown RBP18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 Kansl3A2RSY1 903 aaKnown RBP18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 Vmn2r74E9PW21 853 aa18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 Polr2lP62876 67 aa18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 Ndufs1Q91VD9 727 aaKnown RBP18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 Setd6Q9CWY3 473 aa18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 2010109A12RikQ9D875 119 aa18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 Map3k14Q9WUL6 942 aa18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 Snrpd1P62315 119 aaKnown RBP18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 Larp4bQ6A0A2 741 aaKnown RBP18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 Ttc39cQ8VE09 580 aa18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 Ndufaf1Q9CWX2 328 aa18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 Ubiad1Q9DC60 336 aa18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 Trpm5Q9JJH7 1158 aa18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 InvsO89019 1062 aa18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 EtnpplQ8BWU8 499 aa18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 RragcQ99K70 398 aa18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 Myom1Q62234 1667 aaKnown RBP18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 Ctbp1O88712 441 aa18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 Alas2P08680 587 aa18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 Cxcl9P18340 126 aa18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 Ccnd2P30280 289 aa18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 Fndc3bQ6NWW9 1207 aaKnown RBP18.85■□□□□ 0.61
Sort1-203ENSMUST00000135636 Gxylt2Q810K9 444 aa18.85■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 33.8 ms