RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Scn8aQ9WTU3 1978 aa21.81■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Ccdc170D3YXL0 722 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Kctd18E0CZ26 429 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Cdh18E9Q9Q6 790 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Cyp4f40G3UW81 524 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 ShdO88834 343 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 ZfaP23607 742 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Q3UTZ3 580 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Wnt8aQ64527 354 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Rtl3Q6P1Y1 553 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Znf821Q6PD05 413 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Dalrd3Q6PJN8 538 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Vtcn1Q7TSP5 283 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Mib1Q80SY4 1006 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Q8CDN1 933 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Fam13bQ8K2H3 851 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 St13Q99L47 371 aaKnown RBP21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 PrccQ9EQC8 491 aaKnown RBP21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Dpysl5Q9EQF6 564 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Sept3Q9Z1S5 350 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Kcng1A2BDX4 514 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Adamts6D3Z1A5 1117 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Serpine3E9Q6A2 401 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Vps45P97390 570 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 RelaQ04207 549 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Olfml2bQ3V1G4 746 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Sh3gl2Q62420 352 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Ccdc154Q6RUT8 657 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 MroQ7TNB4 248 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Olfr1128Q7TR47 311 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Trnau1apQ80VC6 287 aaKnown RBP21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 FsbpQ8BKE5 299 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Pak5Q8C015 719 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Spata16Q8C636 571 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Slc26a7Q8R2Z3 656 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Taf12Q8VE65 161 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Lrp8Q924X6 996 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Krt20Q9D312 431 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 LrgukQ9D5S7 820 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Spata9Q9D9R3 252 aa21.8■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Zfp626A0A0U1RQ84 676 aa21.79■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Kcng2F7A6P6 480 aa21.79■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 St3gal1P54751 337 aa21.79■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Igsf9Q05BQ1 1179 aa21.79■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Cntn3Q07409 1028 aa21.79■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Tespa1Q3U132 458 aa21.79■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Enoph1Q8BGB7 257 aa21.79■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 HhatQ8BMT9 499 aa21.79■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Ppfia2Q8BSS9 1257 aa21.79■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Prr33Q8C494 260 aa21.79■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Nlrp4bQ8C6J9 863 aa21.79■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Gspt1Q8R050 636 aaKnown RBP21.79■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Col26a1Q91VF6 440 aa21.79■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Alg1Q921Q3 482 aa21.79■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Slc12a6Q924N4 1150 aa21.79■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Decr1Q9CQ62 335 aaKnown RBP21.79■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Xpo7Q9EPK7 1087 aa21.79■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Vmn2r27D3YUK6 857 aa21.78■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Wnt6P22727 364 aa21.78■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Il12aP43431 215 aa21.78■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Irx1P81068 480 aa21.78■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Cbx1P83917 185 aaKnown RBP21.78■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Mylk3Q3UIZ8 795 aa21.78■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Lag3Q61790 521 aa21.78■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Paqr9Q6TCG2 375 aa21.78■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Baiap2l2Q80Y61 522 aa21.78■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 CcnyQ8BGU5 341 aa21.78■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Znf276Q8CE64 614 aa21.78■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Caap1Q8VDY9 356 aa21.78■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Olfr1353Q8VGU8 309 aa21.78■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Sec63Q8VHE0 760 aaKnown RBP21.78■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Msantd4Q91YU3 345 aa21.78■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Adam33Q923W9 797 aa21.78■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 CoprsQ9CQ13 173 aa21.78■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Ttyh1Q9D3A9 450 aa21.78■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Slc39a5Q9D856 535 aa21.78■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Znrf4Q9DAH2 327 aa21.78■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Noa1Q9JJG9 693 aaKnown RBP21.78■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Tk2Q9R088 270 aa21.78■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 JrklB2RRL2 523 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Abhd12bG3UZN6 359 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 CidecP56198 239 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Dpf3P58269 378 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Rab6bP61294 208 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Adcyap1r1P70205 496 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Hoxd13P70217 339 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 RnaselQ05921 735 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Plpp4Q0VBU9 271 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Dennd1bQ3U1T9 766 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Slc6a4Q60857 630 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Cd6Q61003 665 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Rbl2Q64700 1135 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Nek5Q7TSC3 627 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Srrm3Q80WV7 648 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Ulbp1Q8HWA3 334 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Acsl5Q8JZR0 683 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Dact1Q8R4A3 778 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Scube2Q9JJS0 997 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Znf518bB2RRE4 1077 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Akain1G3UWD5 69 aa21.77■■□□□ 1.08
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms