RNA–Protein interactions for RNA: ENSMUST00000060896.4

Col6a6-201, Transcript of Collagen alpha-6(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a6, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-201ENSMUST00000060896 A930018M24RikB7ZMY3 218 aa7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 XntrpcF8VQM8 1264 aa7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Vmn2r19G5E8G4 854 aa7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 ChrngP04760 519 aa7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Krt6aP50446 553 aa7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Ldb1P70662 411 aa7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Krt80Q0VBK2 452 aa7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Fam91a1Q3UVG3 837 aa7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Tab3Q571K4 716 aa7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Ddx4Q61496 702 aa7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Mvb12bQ6KAU4 317 aa7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Fam107aQ78TU8 144 aa7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Fbxw21Q8BI38 468 aa7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Tubgcp5Q8BKN5 1024 aa7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Nox1Q8CIZ9 591 aa7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Pcdha6Q91Y14 946 aa7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Pcdha1Q91Y21 948 aa7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Lpin1Q91ZP3 924 aa7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Snx2Q9CWK8 519 aa7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Oxct1Q9D0K2 520 aaKnown RBP7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Kif12Q9D2Z8 642 aa7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Dlgap1Q9D415 992 aa7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 MrrfQ9D6S7 262 aaKnown RBP7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Gprc5dQ9JIL6 344 aa7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Slc29a1Q9JIM1 460 aa7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Scube2Q9JJS0 997 aa7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Hic1Q9R1Y5 733 aa7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Ap4b1Q9WV76 738 aa7.09□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Ep400Q8CHI8 3072 aaKnown RBP7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Ccdc194A0A140LIT1 234 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Slc6a21A0A1B0GSD2 748 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Fpr-rs4A4FUQ5 323 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 A630010A05RikA9C473 232 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Dthd1E9PZX1 795 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Klc2O88448 599 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Hsd17b7O88736 334 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Mxd1P50538 227 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Trmt10cQ3UFY8 414 aaKnown RBP7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Dusp11Q6NXK5 321 aaKnown RBP7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Naif1Q6PFD7 327 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 NfascQ810U3 1240 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Tmtc4Q8BG19 741 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Tlk1Q8C0V0 766 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 NaprtQ8CC86 538 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Serpinb10Q8K1K6 397 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Appl1Q8K3H0 707 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 BfarQ8R079 450 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Necab2Q91ZP9 389 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Afg3l1Q920A7 789 aaKnown RBP7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Cog2Q921L5 731 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Mrpl57Q9CQF8 102 aaKnown RBP7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Serbp1Q9CY58 407 aaKnown RBP7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Tex9Q9D845 387 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Stx12Q9ER00 274 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 RalbQ9JIW9 206 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Ccdc86Q9JJ89 426 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Egfl7Q9QXT5 275 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Myh9Q8VDD5 1960 aaKnown RBP7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Tnip3A0A1D5RMN0 279 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 SelenovD3YXG1 328 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Rap1gds1E9Q912 607 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Zc3h12bG3X9I7 835 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Ap3d1O54774 1199 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Vmn2r1O70410 912 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 DcxO88809 366 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Hoxb8P09632 243 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Mup5P11591 180 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Tgm2P21981 686 aaKnown RBP7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Ccna2P51943 422 aaKnown RBP7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Igsf9Q05BQ1 1179 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 DselQ0VBN2 1207 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Trim71Q1PSW8 855 aaKnown RBP7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Glt6d1Q2NKH9 311 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Rcsd1Q3UZA1 412 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Otol1Q4ZJM7 482 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 AcdQ5EE38 416 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Cage1Q5IR70 849 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Smarcd1Q61466 515 aaKnown RBP7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Map3k7Q62073 579 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Npdc1Q64322 332 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Mtrf1lQ8BJU9 373 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Tmem74Q8BQU7 305 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Ankrd52Q8BTI7 1076 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Rmnd1Q8CI78 450 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Itm2cQ91VK4 269 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Hdac11Q91WA3 347 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 NcaldQ91X97 193 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 DtnaQ9D2N4 746 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Slamf8Q9D3G2 278 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 PigqQ9QYT7 581 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Gm5538W4VSP6 401 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Cacna1cQ01815 2139 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Arhgef10Q8C033 1345 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Ptchd4B9EKX1 904 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Zfp558E9Q1J0 407 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Vmn1r39G3UWE6 305 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Gjd2O54851 321 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Mcpt4P21812 246 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Tbc1d10aP58802 500 aa7.08□□□□□ -1.28
Col6a6-201ENSMUST00000060896 Sem1P60897 70 aa7.08□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms