RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Vmn2r72D3Z4N8 856 aa23.55■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Hsph1Q61699 858 aaKnown RBP23.55■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Mib1Q80SY4 1006 aa23.55■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Dcp2Q9CYC6 422 aa23.55■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Vwa7Q9JHA8 891 aa23.55■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Rfc2Q9WUK4 349 aaKnown RBP23.55■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Sgk1Q9WVC6 431 aa23.55■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Myo7aP97479 2215 aa23.55■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Zfy1P10925 782 aa23.55■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Zfp42P22227 288 aa23.55■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Slc6a4Q60857 630 aa23.55■■□□□ 1.36
Upf3a-201ENSMUST00000043767 TwistnbQ78WZ7 330 aaKnown RBP23.55■■□□□ 1.36
Upf3a-201ENSMUST00000043767 C2cd2lQ80X80 706 aa23.55■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Nup54Q8BTS4 510 aaKnown RBP23.55■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Rccd1Q8BTU7 377 aa23.55■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Nipal4Q8BZF2 406 aa23.55■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Gps1Q99LD4 471 aaKnown RBP23.55■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Apba1B2RUJ5 842 aa23.54■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Kctd18E0CZ26 429 aa23.54■■□□□ 1.36
Upf3a-201ENSMUST00000043767 E230025N22RikG5E8S3 482 aa23.54■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Ces1cP23953 554 aa23.54■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Drg1P32233 367 aaKnown RBP23.54■■□□□ 1.36
Upf3a-201ENSMUST00000043767 PterQ60866 349 aa23.54■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Mis18bp1Q80WQ8 998 aa23.54■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Gsto2Q8K2Q2 248 aa23.54■■□□□ 1.36
Upf3a-201ENSMUST00000043767 ItpkaQ8R071 459 aa23.54■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Abcg3Q99P81 650 aa23.54■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Slc25a19Q9DAM5 318 aa23.54■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Adamts5Q9R001 930 aa23.54■■□□□ 1.36
Upf3a-201ENSMUST00000043767 IkbkeQ9R0T8 717 aa23.54■■□□□ 1.36
Upf3a-201ENSMUST00000043767 6030498E09RikB1AX85 169 aa23.53■■□□□ 1.36
Upf3a-201ENSMUST00000043767 4930558K02RikE0CXC6 182 aa23.53■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Ephb3P54754 993 aaKnown RBP23.53■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Irf7P70434 457 aa23.53■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Q3UTZ3 580 aa23.53■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Olfml2bQ3V1G4 746 aa23.53■■□□□ 1.36
Upf3a-201ENSMUST00000043767 KrtdapQ3V2T4 102 aa23.53■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Paqr9Q6TCG2 375 aa23.53■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Atg14Q8CDJ3 492 aa23.53■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Fbxl13Q8CDU4 790 aa23.53■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Fbxo21Q8VDH1 627 aa23.53■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Smim14Q91VT8 99 aa23.53■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Rnf186Q9D241 226 aa23.53■■□□□ 1.36
Upf3a-201ENSMUST00000043767 ParvbQ9ES46 365 aa23.53■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Krt71Q9R0H5 524 aa23.53■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Rp1P56716 2095 aa23.53■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Adcy8P97490 1249 aa23.53■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Pde1bQ01065 535 aa23.53■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Tas2r102Q7M717 329 aa23.53■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Slc41a2Q8BYR8 573 aa23.53■■□□□ 1.36
Upf3a-201ENSMUST00000043767 TsaccQ9DA44 124 aa23.53■■□□□ 1.36
Upf3a-201ENSMUST00000043767 M1apQ9Z0E1 529 aa23.53■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Cdh23Q99PF4 3354 aa23.52■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Psmc3O88685 442 aa23.52■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Slc2a4P14142 509 aa23.52■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Adamts8P57110 905 aa23.52■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Ptprn2P80560 1001 aa23.52■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Plpp4Q0VBU9 271 aa23.52■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Rnf10Q3UIW5 804 aa23.52■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Igfbp7Q61581 281 aa23.52■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Dupd1Q8BK84 215 aa23.52■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Zfp617Q91WM0 559 aa23.52■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Eef1akmt2Q9D853 244 aa23.52■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Ppp1r12aQ9DBR7 1029 aaKnown RBP23.52■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Szt2A2A9C3 3431 aa23.52■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Camk4P08414 469 aa23.52■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Gp6P0C191 313 aa23.52■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Orc2Q60862 576 aaKnown RBP23.52■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Bicd1Q8BR07 835 aa23.52■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Fndc3aQ8BX90 1198 aa23.52■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Nrip1Q8CBD1 1161 aa23.52■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Spdye4bQ8CDE8 236 aa23.52■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Rell1Q8K2J7 272 aa23.52■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Vmn1r213Q8R278 384 aa23.52■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Rsph1Q8VIG3 301 aa23.52■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Pcdhgb1Q91XX8 918 aa23.52■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Magel2Q9QZ04 1284 aa23.52■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Vwa8Q8CC88 1905 aa23.51■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Usp51B1AY15 661 aa23.51■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Kcng2F7A6P6 480 aa23.51■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Ercc2O08811 760 aaKnown RBP23.51■■□□□ 1.35
Upf3a-201ENSMUST00000043767 ShdO88834 343 aa23.51■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Emilin3P59900 758 aa23.51■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Cdo1P60334 200 aa23.51■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Tespa1Q3U132 458 aa23.51■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Fbxw2Q60584 422 aa23.51■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Orai2Q8BH10 250 aa23.51■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Prr33Q8C494 260 aa23.51■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Crlf2Q8CII9 359 aa23.51■■□□□ 1.35
Upf3a-201ENSMUST00000043767 PvrQ8K094 408 aa23.51■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Thg1lQ9CY52 298 aa23.51■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Zcchc8Q9CYA6 709 aaKnown RBP23.51■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Atp6v1e2Q9D593 226 aa23.51■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Tsga13Q9DA17 273 aa23.51■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Klrc2Q9WTJ9 238 aa23.51■■□□□ 1.35
Upf3a-201ENSMUST00000043767 PtprfA2A8L5 1898 aa23.51■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Gm28360A0A087WR25 190 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Gm4924A0A1B0GR71 966 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Atf6F6VAN0 656 aa23.5■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Smpd2O70572 419 aa23.5■■□□□ 1.35
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms