RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 AvilO88398 819 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 PcnaP17918 261 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Gnao1P18872 354 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Crabp2P22935 138 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Atp6v0d1P51863 351 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Fbp2P70695 339 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Coq10bQ3THF9 240 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Zfp956Q3UZY6 572 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Akap7Q7TN79 314 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Pqlc1Q80XM9 271 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Tmem198Q8BG75 360 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 StgQ8BM15 349 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Snx8Q8CFD4 459 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Trim32Q8CH72 655 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Ssx2ipQ8VC66 615 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Plbd1Q8VCI0 550 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Csde1Q91W50 798 aaKnown RBP13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Pcdhga10Q91XY9 930 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Mov10l1Q99MV5 1187 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Asap1Q9QWY8 1147 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Gpc1Q9QZF2 557 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Scn1aA2APX8 2009 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Tspoap1Q7TNF8 1846 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 SmgcF6VRN1 385 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 OmdO35103 423 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Klrk1O54709 232 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 PtpraP18052 829 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Ap1g1P22892 822 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 NrlP54846 237 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Irf3P70671 419 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 IhhP97812 411 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Prdx5P99029 210 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Fam214aQ69ZK7 1075 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Chst10Q6PGK7 356 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Slc39a14Q75N73 489 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Prl3a1Q78Y73 227 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Cnksr2Q80YA9 1032 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Arhgap15Q811M1 481 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Tbc1d17Q8BYH7 645 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Wwp1Q8BZZ3 918 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Nlrp4bQ8C6J9 863 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Scara3Q8C850 606 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Zdhhc3Q8R173 299 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Rps6kl1Q8R2S1 544 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 GcshQ91WK5 170 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Rnf111Q99ML9 989 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Ogfod2Q9CQ04 349 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 1700123K08RikQ9D991 295 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Nme3Q9WV85 169 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 UtrnE9Q6R7 3430 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Hmgxb3G3X9M3 1254 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Dnmt3aO88508 908 aaKnown RBP13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Wnt3aP27467 352 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Scube3Q66PY1 993 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Klhl14Q69ZK5 630 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Paqr6Q6TCG5 343 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Olfr1057Q7TR75 315 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Zbtb41Q811F1 908 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Tlk1Q8C0V0 766 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Galnt5Q8C102 930 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 ClmnQ8C5W0 1052 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Upb1Q8VC97 393 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Lman1lQ8VCD3 505 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Agap3Q8VHH5 910 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Creld1Q91XD7 420 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Atg7Q9D906 698 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Pgam1Q9DBJ1 254 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Akr1c12Q9JLI0 323 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Trpv2Q9WTR1 756 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Cd320Q9Z1P5 260 aa13.75□□□□□ -0.21
Nup88-201ENSMUST00000035283 Top6blJ3QMY9 579 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 LtfP08071 707 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 TktP40142 623 aaKnown RBP13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Morf4l1P60762 362 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Ak8Q32M07 479 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Aste1Q8BIR2 672 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Robo4Q8C310 1012 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 AA792892Q8C6S1 278 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Pcdhb7Q8CDY9 829 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Fnbp1lQ8K012 605 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Erich5Q8K0S2 362 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 1700129C05RikQ9CQ77 218 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 DenrQ9CQJ6 198 aaKnown RBP13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Fam227bQ9D518 532 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Mtmr7Q9Z2C9 660 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Btbd35f15A0A087WR44 498 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Btbd35f12A0A0A0MQP3 498 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Grin3aA2AIR5 1135 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Btbd35f9A2BFZ7 498 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Btbd35f7A2BHG6 498 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Btbd35f19A2CG71 498 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Btbd35f10A2CG92 498 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Btbd35f3A2CGC2 496 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Btbd35f13B8JKF6 498 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Btbd35f2J3QMS5 498 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Btbd35f25J3QMV9 498 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Btbd35f6J3QMW9 498 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Btbd35f26J3QNK2 498 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Btbd35f24J3QNQ5 498 aa13.74□□□□□ -0.21
Nup88-201ENSMUST00000035283 Btbd35f8J3QQ50 498 aa13.74□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 59.5 ms