RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Cd72P21855 354 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Podnl1Q6P3Y9 559 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Btnl1Q7TST0 509 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Wdtc1Q80ZK9 677 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Tp53bp2Q8CG79 1128 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Twf1Q91YR1 350 aaKnown RBP11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Slco1a5Q91YY5 670 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Rnf31Q924T7 1066 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Tubgcp4Q9D4F8 667 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Gm27029A2A4P4 543 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Olfr1305A2AVW3 312 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Akap5D3YVF0 745 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Fitm2P59266 262 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Gpd1lQ3ULJ0 351 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Axdnd1Q3UZ57 424 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Wdr18Q4VBE8 431 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Tlk1Q8C0V0 766 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ap3m2Q8R2R9 418 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Pip4k2cQ91XU3 421 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Paqr5Q9DCU0 330 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Doc2gQ9ESN1 387 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 PorcnQ9JJJ7 461 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Olfr456B2RT27 312 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ifi206G3UZV2 921 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Mtco1P00397 514 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Scd1P13516 355 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 RxraP28700 467 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Cntn3Q07409 1028 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Tmem26Q3UP23 366 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Gm1587Q3UT80 123 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Nab1Q61122 486 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Dyrk4Q8BI55 632 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Abraxas1Q8BPZ8 407 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 WdpcpQ8C456 722 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Rell1Q8K2J7 272 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Acad10Q8K370 1069 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Olfr458Q8VF80 313 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Olfr457Q8VGP5 313 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Hdac11Q91WA3 347 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 CmasQ99KK2 432 aaKnown RBP11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ecrg4Q99LS0 148 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Racgap1Q9WVM1 628 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Gli3Q61602 1583 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ttll11A4Q9F4 727 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Rrn3B2RS91 656 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Mtx3D3YTP3 312 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Zfp850J3QPC5 689 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Slc39a14Q75N73 489 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Fbxo44Q8BK26 255 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Kansl2Q8BQR4 486 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ndufa10Q99LC3 355 aaKnown RBP11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Tnfaip8l2Q9D8Y7 184 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Cldn3Q9Z0G9 219 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ubr2Q6WKZ8 1755 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Zfp142G5E869 1843 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Vmn2r87E9PZX4 848 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Tpst1O70281 370 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Alas2P08680 587 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Prox1P48437 737 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Fmo3P97501 534 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 AcadsQ07417 412 aaKnown RBP11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Patl1Q3TC46 770 aaKnown RBP11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 ScinQ60604 715 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Galnt10Q6P9S7 603 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Gm2163Q6PCY5 473 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Iars2Q8BIJ6 1012 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Pabpc5Q8C7D3 381 aaKnown RBP11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 NaprtQ8CC86 538 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Snx8Q8CFD4 459 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Zfp566Q8VCI1 386 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Sorcs3Q8VI51 1219 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Tnip2Q99JG7 430 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Rsl24d1Q99L28 163 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Gria4Q9Z2W8 902 aa11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Zfc3h1B2RT41 1992 aaKnown RBP11.57□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Gm28168A0A087WNP1 180 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ripor3A1L3T7 938 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Olfr1354E9Q5G9 310 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 C1qbpO35658 278 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Hk1P17710 974 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ppp3ccP48455 513 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Neurl1bQ0MW30 546 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Mapk10Q61831 464 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Cand1Q6ZQ38 1230 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Pcdh20Q8BIZ0 952 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Sntg2Q925E0 539 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 PtsQ9R1Z7 144 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Gm3752A6NAT4 150 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Plekha5E9Q6H8 1269 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Gemin4Q6P6L6 1058 aaKnown RBP11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Olfr392Q7TRX6 312 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Fads6Q80UG1 342 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Tmem121Q80XA0 318 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Elmo2Q8BHL5 732 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Sun2Q8BJS4 731 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Atp6v1g3Q8BMC1 118 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Kiaa2013Q91X21 634 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ddx50Q99MJ9 734 aaKnown RBP11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Q9CQC3 228 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Thg1lQ9CY52 298 aa11.56□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 26.1 ms