RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Tfr2Q9JKX3 798 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 SncgQ9Z0F7 123 aaKnown RBP4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Klhl3E0CZ16 587 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Nmt2O70311 529 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Oas1aP11928 367 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 MutP16332 748 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Nr1d2Q60674 576 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Usp49Q6P9L4 685 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Oas1gQ8K469 367 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 CmasQ99KK2 432 aaKnown RBP4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Dpp3Q99KK7 738 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Gins2Q9D600 185 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Lrrc34Q9DAM1 415 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Atp13a1Q9EPE9 1200 aaKnown RBP4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Scn3aA2ASI5 1947 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 SprtnG3X912 497 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 AfpP02772 605 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Gpr162Q3UN16 588 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Sec31aQ3UPL0 1230 aaKnown RBP4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Rnf220Q6PDX6 566 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Acot5Q6Q2Z6 421 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Abcg2Q7TMS5 657 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Ppp2r1bQ7TNP2 601 aaKnown RBP4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Eme1Q8BJW7 570 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Dis3lQ8C0S1 1053 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Eif3lQ8QZY1 564 aaKnown RBP4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Tasp1Q8R1G1 420 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Zbtb32Q9JKD9 465 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 PtsQ9R1Z7 144 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Zfp142G5E869 1843 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Ecm29Q6PDI5 1840 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Pkd2l1A2A259 760 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Atp8b5A3FIN4 1183 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Gm5799E9Q2M1 201 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 GcatO88986 416 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 CnpP16330 420 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Fads2p1Q0VAX3 487 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Tgfbr2Q62312 592 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Slitrk1Q810C1 696 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Cdc73Q8JZM7 531 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Plekhg6Q8R0J1 787 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Mlc1Q8VHK5 382 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 DarsQ922B2 501 aaKnown RBP4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Rtfdc1Q99K95 307 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Kif19Q99PT9 997 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Izumo2Q9DA16 220 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Ppp1r36D3Z0R2 411 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Tnfrsf18O35714 228 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Cdh3P10287 822 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Lrpap1P55302 360 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Llgl2Q3TJ91 1027 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Hectd3Q3U487 861 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Tmem237Q3V0J1 427 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Klra6Q60653 266 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Pdzph1Q8BGR1 1238 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Gpr1Q8K087 353 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Lrrc14Q8VC16 493 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Hkdc1Q91W97 915 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Lrrc57Q9D1G5 239 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Nol3Q9D1X0 220 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Tmbim6Q9D2C7 237 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Ddi1Q9DAF3 408 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Pdpk1Q9Z2A0 559 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Gm8994E9PV04 411 aaKnown RBP4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Cyp2d9P11714 504 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Galnt3P70419 633 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Oas1fQ14AZ4 364 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Rad54bQ6PFE3 886 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Zfyve28Q6ZPK7 905 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Gadl1Q80WP8 550 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Rasal3Q8C2K5 1041 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Mrpl48Q8JZS9 211 aaKnown RBP4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Slc22a19Q8VCA0 551 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Pcdha10Q91Y20 946 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Actr3Q99JY9 418 aaKnown RBP4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Sh3bp5lQ99LH9 392 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Ogfod2Q9CQ04 349 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Fam227aQ9D3V8 625 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Gpn3Q9D3W4 284 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Spats1A2RRY8 269 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Usp51B1AY15 661 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Mybpc1D3YU50 1127 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Nek2O35942 443 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Crabp2P22935 138 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 LtbrP50284 415 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Ube2e3P52483 207 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Samd11Q1RNF8 542 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Fam172aQ3TNH5 417 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 P3h1Q3V1T4 739 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Znf423Q80TS5 1292 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Q80WR5 230 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Armc6Q8BNU0 468 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Ferd3lQ923Z4 168 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Tmem86aQ9D8N3 241 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Sertad1Q9JL10 236 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 AuhQ9JLZ3 314 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Vmn2r31L7N1Z4 861 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Tnk2O54967 1055 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 PenkP22005 268 aa4.65□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Man1a2P39098 641 aa4.65□□□□□ -1.66
Retrieved 100 of 22,080 RNA–protein pairs in 28.2 ms