RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Atxn2lQ7TQH0 1049 aaKnown RBP11.05□□□□□ -0.64
Ciita-201ENSMUST00000023147 Zscan4cQ80VJ6 506 aa11.05□□□□□ -0.64
Ciita-201ENSMUST00000023147 Cxcl16Q8BSU2 246 aa11.05□□□□□ -0.64
Ciita-201ENSMUST00000023147 Ifi44Q8BV66 422 aa11.05□□□□□ -0.64
Ciita-201ENSMUST00000023147 BsndQ8VIM4 307 aa11.05□□□□□ -0.64
Ciita-201ENSMUST00000023147 Senp2Q91ZX6 588 aa11.05□□□□□ -0.64
Ciita-201ENSMUST00000023147 Ssu72Q9CY97 194 aaKnown RBP11.05□□□□□ -0.64
Ciita-201ENSMUST00000023147 Ankef1Q9D2J7 775 aa11.05□□□□□ -0.64
Ciita-201ENSMUST00000023147 4933425L06RikQ9D3Z8 585 aa11.05□□□□□ -0.64
Ciita-201ENSMUST00000023147 HnrnpdlQ9Z130 301 aaKnown RBP11.05□□□□□ -0.64
Ciita-201ENSMUST00000023147 Tiam2Q6ZPF3 1715 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Rhbdl2A2AGA4 302 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Gm44G3UW88 330 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 TyrobpO54885 114 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Slc16a2O70324 545 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Vps26aP40336 327 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Rbp1Q00915 135 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Pdap1Q3UHX2 181 aaKnown RBP11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Tmem237Q3V0J1 427 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Rbl2Q64700 1135 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Gm2163Q6PCY5 473 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Btnl9Q8BJE2 536 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 FsbpQ8BKE5 299 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Arhgap25Q8BYW1 648 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 PpatQ8CIH9 517 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Rps6kl1Q8R2S1 544 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Map3k21Q8VDG6 1002 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Pcdh18Q8VHR0 1134 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Fam49bQ921M7 324 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Yaf2Q99LW6 179 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 GsdmcQ99NB5 468 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Prdm5Q9CXE0 599 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Gm4985A2ALC6 410 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Gm5160F8VPN3 147 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Gm8011K7N6Y5 207 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 TecP24604 630 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Epha3P29319 983 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Lilrb3P97484 841 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Znf513Q6PD29 541 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Armcx6Q8K3A6 301 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Rec114Q9CWH4 259 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Cep97Q9CZ62 856 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Fam45aQ9D8N2 357 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Sema6bO54951 886 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Tp53i13Q5F267 385 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Tll1Q62381 1013 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Foxo6Q70KY4 559 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Nipa1Q8BHK1 323 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Cyp2c70Q91W64 489 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Serbp1Q9CY58 407 aaKnown RBP11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Mta2Q9R190 668 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Atp8b4A2ANX3 1194 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Tnfrsf25B1AWN9 411 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Zbed6D2EAC2 980 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Rpl21O09167 160 aaKnown RBP11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Phka1P18826 1241 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Shcbp1lQ3TTP0 639 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Scn2bQ56A07 215 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Ugt1a9Q62452 528 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Ugt1a1Q63886 535 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Atg9bQ6EBV9 922 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Camta2Q80Y50 1208 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 GskipQ8BGR8 139 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Gper1Q8BMP4 375 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Dennd2aQ8C4S8 1000 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Asb14Q8C6Y6 587 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Nlrp10Q8CCN1 673 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Pcdhb6Q91XZ4 772 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Prmt7Q922X9 692 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Mov10l1Q99MV5 1187 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Lrrc17Q9CXD9 443 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Sh3glb1Q9JK48 365 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Vav3Q9R0C8 847 aa11.04□□□□□ -0.64
Ciita-201ENSMUST00000023147 Gm13941A2AJ38 245 aa11.03□□□□□ -0.64
Ciita-201ENSMUST00000023147 Mmp15O54732 657 aa11.03□□□□□ -0.64
Ciita-201ENSMUST00000023147 GcatO88986 416 aa11.03□□□□□ -0.64
Ciita-201ENSMUST00000023147 Mtnd2P03893 345 aa11.03□□□□□ -0.64
Ciita-201ENSMUST00000023147 Scd1P13516 355 aa11.03□□□□□ -0.64
Ciita-201ENSMUST00000023147 Epb41P48193 858 aa11.03□□□□□ -0.64
Ciita-201ENSMUST00000023147 Znf112Q0VAW7 879 aa11.03□□□□□ -0.64
Ciita-201ENSMUST00000023147 Zswim9Q6DI92 447 aa11.03□□□□□ -0.64
Ciita-201ENSMUST00000023147 Tubgcp5Q8BKN5 1024 aa11.03□□□□□ -0.64
Ciita-201ENSMUST00000023147 UstQ8BUB6 407 aa11.03□□□□□ -0.64
Ciita-201ENSMUST00000023147 EtnpplQ8BWU8 499 aa11.03□□□□□ -0.64
Ciita-201ENSMUST00000023147 Epc2Q8C0I4 808 aa11.03□□□□□ -0.64
Ciita-201ENSMUST00000023147 Hist1h2aaQ8CGP4 129 aa11.03□□□□□ -0.64
Ciita-201ENSMUST00000023147 Chrna3Q8R4G9 499 aa11.03□□□□□ -0.64
Ciita-201ENSMUST00000023147 Akr1c21Q91WR5 323 aa11.03□□□□□ -0.64
Ciita-201ENSMUST00000023147 Pcdhgb5Q91XX5 926 aa11.03□□□□□ -0.64
Ciita-201ENSMUST00000023147 CoprsQ9CQ13 173 aa11.03□□□□□ -0.64
Ciita-201ENSMUST00000023147 PrameQ9D4Z5 464 aa11.03□□□□□ -0.64
Ciita-201ENSMUST00000023147 Sv2aQ9JIS5 742 aa11.03□□□□□ -0.64
Ciita-201ENSMUST00000023147 AuhQ9JLZ3 314 aa11.03□□□□□ -0.64
Ciita-201ENSMUST00000023147 Bcl9lQ67FY2 1494 aa11.03□□□□□ -0.64
Ciita-201ENSMUST00000023147 Gm43518A0A0G2JGB6 165 aa11.03□□□□□ -0.64
Ciita-201ENSMUST00000023147 AspgA0JNU3 564 aa11.03□□□□□ -0.64
Ciita-201ENSMUST00000023147 FanceB8JJD6 213 aa11.03□□□□□ -0.64
Ciita-201ENSMUST00000023147 Lipo2D3YY49 398 aa11.03□□□□□ -0.64
Ciita-201ENSMUST00000023147 Lilra5D3Z7A9 295 aa11.03□□□□□ -0.64
Ciita-201ENSMUST00000023147 Srsf11E9Q6E5 511 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms