RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Kbtbd7G5E8C2 690 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Rhox6O70238 227 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 AdslP54822 484 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Otol1Q4ZJM7 482 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Ptbp3Q8BHD7 523 aaKnown RBP17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Tmem82Q8R115 356 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Lrrc18Q9CQ07 262 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 StambpQ9CQ26 424 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Tmem53Q9D0Z3 276 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Txnrd2Q9JLT4 524 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Rbck1Q9WUB0 508 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Ms4a14A0A087WSD2 1232 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Tuba1cP68373 449 aaKnown RBP17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Ebf1Q07802 591 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Mef2aQ60929 498 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Ddr2Q62371 854 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Cacna2d2Q6PHS9 1154 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Disc1Q811T9 852 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Prdx6bQ8BG37 224 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Mical2Q8BML1 960 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Itpk1Q8BYN3 419 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Myoz2Q9JJW5 264 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Tuba8Q9JJZ2 449 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Pcsk1nQ9QXV0 258 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 RecqlQ9Z129 648 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Mroh4G3X8W1 983 aa17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Cdk2ap1O35207 114 aa17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 PrkceP16054 737 aa17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Tac1P41539 130 aa17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Atp6v1b2P62814 511 aa17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Msx2Q03358 267 aa17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Ubap2lQ80X50 1107 aaKnown RBP17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Zfp454Q80Y34 536 aa17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Slc46a2Q8CA03 479 aa17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Kat14Q8CID0 779 aa17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 NonoQ99K48 473 aaKnown RBP17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Pkp2Q9CQ73 795 aaKnown RBP17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 RalbQ9JIW9 206 aa17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Zbtb12Q9Z150 459 aa17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Gm3187M0QWW3 260 aa17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Pold2O35654 469 aa17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Mxi1P50540 228 aa17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Psmc1P62192 440 aa17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Syce1lQ5D525 247 aa17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Rab34Q64008 259 aa17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Slc39a14Q75N73 489 aa17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Mrgprb8Q7TN51 330 aa17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Slc9a4Q8BUE1 797 aa17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Senp7Q8BUH8 1037 aa17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Mtss1Q8R1S4 759 aa17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Pglyrp2Q8VCS0 530 aa17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Isoc1Q91V64 297 aa17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Emc2Q9CRD2 297 aa17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Apbb2Q9DBR4 760 aa17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Mrpl4Q9DCU6 294 aaKnown RBP17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Gm5538W4VSP6 401 aa17.27■□□□□ 0.36
Ctcf-201ENSMUST00000005841 MipP51180 263 aa17.27■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Taf1bP97358 586 aa17.27■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Gm4951Q3UED7 406 aa17.27■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Lag3Q61790 521 aa17.27■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Olfr813Q7TRH5 310 aa17.27■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Bhlhe22Q8C6A8 355 aa17.27■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Ppp6r2Q8R3Q2 923 aa17.27■□□□□ 0.35
Ctcf-201ENSMUST00000005841 CygbQ9CX80 190 aa17.27■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Sbf1Q6ZPE2 1867 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Tatdn2B7ZNL9 783 aaKnown RBP17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Serpinb3aG3X9V8 387 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 2610028H24RikG5E8K1 270 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 GzmkO35205 263 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Morf4l1P60762 362 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Fmo3P97501 534 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Sox10Q04888 466 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Ankrd27Q3UMR0 1048 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Adamts18Q4VC17 1219 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Ptpn14Q62130 1189 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Dars2Q8BIP0 653 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Olfr784Q8VFZ9 319 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Snx15Q91WE1 337 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Lsm12Q9D0R8 195 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 QkiQ9QYS9 341 aaKnown RBP17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 LtfP08071 707 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 PfkmP47857 780 aaKnown RBP17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Ak8Q32M07 479 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Sema4aQ62178 760 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Tmem252Q8C353 183 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Dennd2dQ91VV4 469 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 HnrnpabQ99020 285 aaKnown RBP17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Aldh1b1Q9CZS1 519 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Fam3aQ9D8T0 230 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Spata9Q9D9R3 252 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 FibpQ9JI19 357 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Tubd1Q9R1K7 455 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Cntnap1O54991 1385 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Gm3173A6NAS3 172 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Gm28043E0CXC2 719 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Gm3020E9Q3J7 150 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Gm2897K7N6T7 172 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 RapsnP12672 412 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Pld2P97813 933 aa17.26■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Snx21Q3UR97 363 aa17.26■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms