RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 THAP4Q8WY91 577 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 XPO6Q96QU8 1125 aaKnown RBP3.71□□□□□ -1.82
CCDC7-213ENST00000639290 PAAF1Q9BRP4 392 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 SLC25A23Q9BV35 468 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 SLKQ9H2G2 1235 aaPredicted RBP3.71□□□□□ -1.82
CCDC7-213ENST00000639290 CD93Q9NPY3 652 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 ASF1BQ9NVP2 202 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 PAG1Q9NWQ8 432 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 THAP10Q9P2Z0 257 aaPredicted RBP3.71□□□□□ -1.82
CCDC7-213ENST00000639290 GABBR1Q9UBS5 961 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 SERTAD1Q9UHV2 236 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 GGT7Q9UJ14 662 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 OSGIN2Q9Y236 505 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 NCKAP1Q9Y2A7 1128 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 PCDHGA11Q9Y5H2 935 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 COPG1Q9Y678 874 aaKnown RBP3.71□□□□□ -1.82
CCDC7-213ENST00000639290 OAS3Q9Y6K5 1087 aaKnown RBP3.71□□□□□ -1.82
CCDC7-213ENST00000639290 A0A0U1RQS6 177 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 PTGESO14684 152 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 APAF1O14727 1248 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 PROM1O43490 865 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 CACNG3O60359 315 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 SPATA31C1P0DKV0 1188 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 TYMPP19971 482 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 EXOSC9Q06265 439 aaKnown RBP3.71□□□□□ -1.82
CCDC7-213ENST00000639290 NNTQ13423 1086 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 TRA2AQ13595 282 aaKnown RBP eCLIP3.71□□□□□ -1.82
CCDC7-213ENST00000639290 EIF4HQ15056 248 aaKnown RBP3.71□□□□□ -1.82
CCDC7-213ENST00000639290 DEFB113Q30KQ7 82 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 PRR30Q53SZ7 412 aaPredicted RBP3.71□□□□□ -1.82
CCDC7-213ENST00000639290 SWSAP1Q6NVH7 229 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 HS2ST1Q7LGA3 356 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 LYSMD3Q7Z3D4 306 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 TMC6Q7Z403 805 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 SPATS2Q86XZ4 545 aaKnown RBP3.71□□□□□ -1.82
CCDC7-213ENST00000639290 ULK2Q8IYT8 1036 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 SPPL2BQ8TCT7 592 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 HASPINQ8TF76 798 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 TCP11Q8WWU5 503 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 STARD8Q92502 1023 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 PPP1R10Q96QC0 940 aaKnown RBP3.71□□□□□ -1.82
CCDC7-213ENST00000639290 GFM1Q96RP9 751 aaKnown RBP3.71□□□□□ -1.82
CCDC7-213ENST00000639290 BOCQ9BWV1 1114 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 SRA1Q9HD15 236 aaKnown RBP3.71□□□□□ -1.82
CCDC7-213ENST00000639290 AASDHPPTQ9NRN7 309 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 BARHL2Q9NY43 387 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 WDR35Q9P2L0 1181 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 ORC3Q9UBD5 711 aaPredicted RBP3.71□□□□□ -1.82
CCDC7-213ENST00000639290 PCDHA10Q9Y5I2 948 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 SLCO1B1Q9Y6L6 691 aa3.71□□□□□ -1.82
CCDC7-213ENST00000639290 NBEAL2Q6ZNJ1 2754 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 PNMA6FA0A0J9YX94 578 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 K7ESM1 405 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 GOLIM4O00461 696 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 TIMM44O43615 452 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 TULP3O75386 442 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 CCNE2O96020 404 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 CENPBP07199 599 aaPredicted RBP3.7□□□□□ -1.82
CCDC7-213ENST00000639290 PEPDP12955 493 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 PNLIPP16233 465 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 EGR1P18146 543 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 NOS2P35228 1153 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 UGT1A3P35503 534 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 VAMP7P51809 220 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 ARPP19P56211 112 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 CAMK2GQ13555 558 aaPredicted RBP3.7□□□□□ -1.82
CCDC7-213ENST00000639290 AAMPQ13685 434 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 HEPHL1Q6MZM0 1159 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 MEX3BQ6ZN04 569 aaKnown RBP3.7□□□□□ -1.82
CCDC7-213ENST00000639290 NLGN4XQ8N0W4 816 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 NLGN4YQ8NFZ3 816 aaPredicted RBP3.7□□□□□ -1.82
CCDC7-213ENST00000639290 APPBP2Q92624 585 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 EIF2AQ9BY44 585 aaKnown RBP3.7□□□□□ -1.82
CCDC7-213ENST00000639290 DCLK3Q9C098 648 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 MKRN2Q9H000 416 aaKnown RBP3.7□□□□□ -1.82
CCDC7-213ENST00000639290 EHD2Q9NZN4 543 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 MAP10Q9P2G4 905 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 NKX1-2Q9UD57 310 aaPredicted RBP3.7□□□□□ -1.82
CCDC7-213ENST00000639290 ADGRE2Q9UHX3 823 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 VPS51Q9UID3 782 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 SLC27A6Q9Y2P4 619 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 PCDHGA6Q9Y5G7 932 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 ARID1BQ8NFD5 2236 aaPredicted RBP3.7□□□□□ -1.82
CCDC7-213ENST00000639290 SSU72P8A0A1W2PR75 194 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 B4E171 279 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 M0QZQ0 153 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 LATO43561 262 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 FZD6O60353 706 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 PGRP06401 933 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 PDGFRBP09619 1106 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 FAM157CP0CG43 387 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 CD19P15391 556 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 CFPP27918 469 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 KIF5BP33176 963 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 TSPAN7P41732 249 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 TBX4P57082 545 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 HNRNPKP61978 463 aaKnown RBP eCLIP3.7□□□□□ -1.82
CCDC7-213ENST00000639290 SETQ01105 290 aaPredicted RBP3.7□□□□□ -1.82
CCDC7-213ENST00000639290 CDK18Q07002 472 aa3.7□□□□□ -1.82
CCDC7-213ENST00000639290 DUSP4Q13115 394 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms