RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 RAD54BQ9Y620 910 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 HFM1A2PYH4 1435 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-209ENST00000639244 RNF103-CHMP3A0A140T963 221 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 RNF103O00237 685 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 GMDSO60547 372 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 RARGP13631 454 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 RPL5P46777 297 aaKnown RBP4.41□□□□□ -1.7
SCN3A-209ENST00000639244 CDH6P55285 790 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 ARF3P61204 181 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-209ENST00000639244 ARF1P84077 181 aaKnown RBP4.41□□□□□ -1.7
SCN3A-209ENST00000639244 ZNF177Q13360 481 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-209ENST00000639244 FGL2Q14314 439 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 ITIH4Q14624 930 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 EPC2Q52LR7 807 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 CCNJQ5T5M9 372 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 PYROXD2Q8N2H3 581 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 TMIEQ8NEW7 156 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 CEP76Q8TAP6 659 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 GAB3Q8WWW8 586 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 DPF1Q92782 380 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 ASB2Q96Q27 587 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 PANX2Q96RD6 677 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 CRB3Q9BUF7 120 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 NDST4Q9H3R1 872 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 NUP160Q12769 1436 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 UTYO14607 1347 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 SMARCA4P51532 1647 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 GNG14A0A1W2PPG7 69 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 KBTBD13C9JR72 458 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 ENO3P13929 434 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-209ENST00000639244 WARSP23381 471 aaKnown RBP4.41□□□□□ -1.7
SCN3A-209ENST00000639244 MAGEA1P43355 309 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 TNFAIP2Q03169 654 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 KCNA10Q16322 511 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 SLC39A12Q504Y0 691 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 DALRD3Q5D0E6 543 aaKnown RBP4.41□□□□□ -1.7
SCN3A-209ENST00000639244 ANKS6Q68DC2 871 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 XRRA1Q6P2D8 792 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 SRBD1Q8N5C6 995 aaKnown RBP4.41□□□□□ -1.7
SCN3A-209ENST00000639244 POC1BQ8TC44 478 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 PSPC1Q8WXF1 523 aaKnown RBP4.41□□□□□ -1.7
SCN3A-209ENST00000639244 SLC25A36Q96CQ1 311 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 SENP6Q9GZR1 1112 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-209ENST00000639244 PCDH9Q9HC56 1237 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 PMS2P1A4D2B8 440 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 CABYRO75952 493 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 RALBP11234 206 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 GLRA2P23416 452 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 TRHRP34981 398 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-209ENST00000639244 DGCR6Q14129 220 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 SLC39A14Q15043 492 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 JMJD6Q6NYC1 403 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-209ENST00000639244 ISLR2Q6UXK2 745 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 MSANTD1Q6ZTZ1 278 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 ASPGQ86U10 573 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 GALNT12Q8IXK2 581 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 UBE2J2Q8N2K1 259 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 TMIGD2Q96BF3 282 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 ERLEC1Q96DZ1 483 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 EGLN2Q96KS0 407 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 DSCC1Q9BVC3 393 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 CCDC59Q9P031 241 aaKnown RBP4.41□□□□□ -1.7
SCN3A-209ENST00000639244 IL19Q9UHD0 177 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 SHANK2Q9UPX8 1470 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 CHD1O14646 1710 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 TRIM38O00635 465 aa4.4□□□□□ -1.7
SCN3A-209ENST00000639244 LCKP06239 509 aa4.4□□□□□ -1.7
SCN3A-209ENST00000639244 CCT3P49368 545 aaKnown RBP4.4□□□□□ -1.7
SCN3A-209ENST00000639244 VAV2P52735 878 aa4.4□□□□□ -1.7
SCN3A-209ENST00000639244 MTMR1Q13613 665 aa4.4□□□□□ -1.7
SCN3A-209ENST00000639244 MEX3BQ6ZN04 569 aaKnown RBP4.4□□□□□ -1.7
SCN3A-209ENST00000639244 USP43Q70EL4 1123 aa4.4□□□□□ -1.7
SCN3A-209ENST00000639244 CCDC105Q8IYK2 499 aa4.4□□□□□ -1.7
SCN3A-209ENST00000639244 AGGF1Q8N302 714 aaeCLIP4.4□□□□□ -1.7
SCN3A-209ENST00000639244 FBXL16Q8N461 479 aa4.4□□□□□ -1.7
SCN3A-209ENST00000639244 SLC20A1Q8WUM9 679 aa4.4□□□□□ -1.7
SCN3A-209ENST00000639244 UBXN10Q96LJ8 280 aa4.4□□□□□ -1.7
SCN3A-209ENST00000639244 CITED4Q96RK1 184 aa4.4□□□□□ -1.7
SCN3A-209ENST00000639244 SLC4A5Q9BY07 1137 aa4.4□□□□□ -1.7
SCN3A-209ENST00000639244 TXLNGYQ9BZA5 131 aa4.4□□□□□ -1.7
SCN3A-209ENST00000639244 PHAXQ9H814 394 aaKnown RBP4.4□□□□□ -1.7
SCN3A-209ENST00000639244 EPB41L5Q9HCM4 733 aa4.4□□□□□ -1.7
SCN3A-209ENST00000639244 PI4KBQ9UBF8 816 aa4.4□□□□□ -1.7
SCN3A-209ENST00000639244 SLC24A2Q9UI40 661 aa4.4□□□□□ -1.7
SCN3A-209ENST00000639244 CDC23Q9UJX2 597 aa4.4□□□□□ -1.7
SCN3A-209ENST00000639244 PCOLCE2Q9UKZ9 415 aa4.4□□□□□ -1.7
SCN3A-209ENST00000639244 HMX3A6NHT5 357 aa4.4□□□□□ -1.7
SCN3A-209ENST00000639244 I3L4J1 428 aa4.4□□□□□ -1.7
SCN3A-209ENST00000639244 TXNDC9O14530 226 aa4.4□□□□□ -1.7
SCN3A-209ENST00000639244 TLR5O60602 858 aa4.4□□□□□ -1.7
SCN3A-209ENST00000639244 PPP6R2O75170 966 aa4.4□□□□□ -1.7
SCN3A-209ENST00000639244 RBBP9O75884 186 aa4.4□□□□□ -1.7
SCN3A-209ENST00000639244 PHKA2P46019 1235 aa4.4□□□□□ -1.7
SCN3A-209ENST00000639244 GMFBP60983 142 aa4.4□□□□□ -1.7
SCN3A-209ENST00000639244 ASAP3Q8TDY4 903 aa4.4□□□□□ -1.7
SCN3A-209ENST00000639244 SETDB2Q96T68 719 aa4.4□□□□□ -1.7
SCN3A-209ENST00000639244 FRMD8P1Q9BZ68 369 aaPredicted RBP4.4□□□□□ -1.7
SCN3A-209ENST00000639244 C12orf65Q9H3J6 166 aaKnown RBP4.4□□□□□ -1.7
SCN3A-209ENST00000639244 KCNH7Q9NS40 1196 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms