RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 STX7O15400 261 aaKnown RBP5.68□□□□□ -1.5
CHD2-227ENST00000637572 TSHRP16473 764 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 OR1E1P30953 314 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 OR1D2P34982 312 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 BRCC3P46736 316 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 CLCNKBP51801 687 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 NAB1Q13506 487 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 RAB30Q15771 203 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 CCDC38Q502W7 563 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 C2CD6Q53TS8 623 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 SLC4A11Q8NBS3 891 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 IPMKQ8NFU5 416 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 HES6Q96HZ4 224 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 FOPNLQ96NB1 174 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 AGAP3Q96P47 875 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 SERPINB12Q96P63 405 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 RAB3IPQ96QF0 476 aaPredicted RBP5.68□□□□□ -1.5
CHD2-227ENST00000637572 GPR63Q9BZJ6 419 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 RGS18Q9NS28 235 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 RAD18Q9NS91 495 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 OR12D3Q9UGF7 316 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 L1RE1Q9UN81 338 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 PHF24Q9UPV7 400 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 HBS1LQ9Y450 684 aaKnown RBP5.68□□□□□ -1.5
CHD2-227ENST00000637572 ZNF263O14978 683 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 TIMM44O43615 452 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 ATP2C2O75185 946 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 SMIM24O75264 130 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 BRAFP15056 766 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 HDCP19113 662 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 NDUFV1P49821 464 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 DRG2P55039 364 aaKnown RBP5.67□□□□□ -1.5
CHD2-227ENST00000637572 RHOAP61586 193 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 POLR2LP62875 67 aaKnown RBP5.67□□□□□ -1.5
CHD2-227ENST00000637572 CDH17Q12864 832 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 KRT33BQ14525 404 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 TTLL9Q3SXZ7 439 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 MFSD7Q6UXD7 560 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 TAS2R42Q7RTR8 314 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 RPAINQ86UA6 219 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 CARNMT1Q8N4J0 409 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 CEP295NLQ96MC4 621 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 SPSB2Q99619 263 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 BCO2Q9BYV7 579 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 ZYG11BQ9C0D3 744 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 DRC3Q9H069 523 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 ADAMTS10Q9H324 1103 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 SCUBE2Q9NQ36 999 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 DNAJC17Q9NVM6 304 aaKnown RBP5.67□□□□□ -1.5
CHD2-227ENST00000637572 ARHGEF38Q9NXL2 777 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 KLHL42Q9P2K6 505 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 AFF4Q9UHB7 1163 aaKnown RBP5.67□□□□□ -1.5
CHD2-227ENST00000637572 GRIN2DO15399 1336 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 PTPRJQ12913 1337 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 MDM4O15151 490 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 RARAP10276 462 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 KCNJ1P48048 391 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 STARD3Q14849 445 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 SLC45A4Q5BKX6 768 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 ZBTB41Q5SVQ8 909 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 C3orf62Q6ZUJ4 267 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 MON1BQ7L1V2 547 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 LRRC6Q86X45 466 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 RGL4Q8IZJ4 473 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 BTN2A3PQ96KV6 586 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 RNF157Q96PX1 679 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 PHACTR1Q9C0D0 580 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 LRRC19Q9H756 370 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 ATP13A1Q9HD20 1204 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 CHORDC1Q9UHD1 332 aaPredicted RBP5.67□□□□□ -1.5
CHD2-227ENST00000637572 SLC24A2Q9UI40 661 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 RABGEF1Q9UJ41 708 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 MRPS23Q9Y3D9 190 aaKnown RBP5.67□□□□□ -1.5
CHD2-227ENST00000637572 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.67□□□□□ -1.5
CHD2-227ENST00000637572 DOCK2Q92608 1830 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 TLR5O60602 858 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 PEX14O75381 377 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 IGSF6O95976 241 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 PYGMP11217 842 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 ASPAP45381 313 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 IRX4P78413 519 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 SULT2A1Q06520 285 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 INCA1Q0VD86 236 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 LAMA4Q16363 1823 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 PARP6Q2NL67 630 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 PTPN20Q4JDL3 420 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 FASTKD1Q53R41 847 aaKnown RBP5.67□□□□□ -1.5
CHD2-227ENST00000637572 PDE12Q6L8Q7 609 aaKnown RBP5.67□□□□□ -1.5
CHD2-227ENST00000637572 SBF2Q86WG5 1849 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 PPFIBP2Q8ND30 876 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 USP33Q8TEY7 942 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 KCTD13Q8WZ19 329 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 TOX2Q96NM4 488 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 ADGRA2Q96PE1 1338 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 TRIM55Q9BYV6 548 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 VPS11Q9H270 941 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 MINDY3Q9H8M7 445 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 EML4Q9HC35 981 aaKnown RBP5.67□□□□□ -1.5
CHD2-227ENST00000637572 ERVK-5Q9HDB9 667 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 RBM22Q9NW64 420 aaKnown RBP eCLIP5.67□□□□□ -1.54e-10■■■■■ 53.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms