RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 E9PAM4 449 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 SCAMP3O14828 347 aaKnown RBP12.87□□□□□ -0.35
LINC00963-216ENST00000623185 SPOPO43791 374 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 CYP17A1P05093 508 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 TCF4P15884 667 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 TAS2R40P59535 323 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 TNK2Q07912 1038 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 ATP13A4Q4VNC1 1196 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 RABGAP1LQ5R372 815 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 MANEALQ5VSG8 457 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 DAB2IPQ5VWQ8 1189 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 FYB2Q5VWT5 728 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 RNF43Q68DV7 783 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 TXNRD3NBQ6F5E7 133 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 RFWD3Q6PCD5 774 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 C1orf228Q6PIY5 440 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 TPGS1Q6ZTW0 290 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 C14orf80Q86SX3 495 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 NT5DC3Q86UY8 548 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 RALGPS2Q86X27 583 aaPredicted RBP12.87□□□□□ -0.35
LINC00963-216ENST00000623185 CHSY1Q86X52 802 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 VSIG1Q86XK7 387 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 LGI2Q8N0V4 545 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 ZNF557Q8N988 423 aaPredicted RBP12.87□□□□□ -0.35
LINC00963-216ENST00000623185 DDI1Q8WTU0 396 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 MSANTD3Q96H12 275 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 BBS2Q9BXC9 721 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 MAGEB5Q9BZ81 275 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 DHX35Q9H5Z1 703 aaKnown RBP12.87□□□□□ -0.35
LINC00963-216ENST00000623185 ZWILCHQ9H900 591 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 TRMT1Q9NXH9 659 aaKnown RBP12.87□□□□□ -0.35
LINC00963-216ENST00000623185 DDX56Q9NY93 547 aaKnown RBP12.87□□□□□ -0.35
LINC00963-216ENST00000623185 DONSONQ9NYP3 566 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 STIM2Q9P246 746 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 AMFRQ9UKV5 643 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 PCDHA3Q9Y5H8 950 aa12.87□□□□□ -0.35
LINC00963-216ENST00000623185 SPTBN5Q9NRC6 3674 aaKnown RBP12.86□□□□□ -0.35
LINC00963-216ENST00000623185 A0A0A0MRY4 1105 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 CCDC66A2RUB6 948 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 TYW5A2RUC4 315 aaKnown RBP12.86□□□□□ -0.35
LINC00963-216ENST00000623185 MIF4GDA9UHW6 222 aaKnown RBP12.86□□□□□ -0.35
LINC00963-216ENST00000623185 FAM72CH0Y354 149 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 TRDMT1O14717 391 aaKnown RBP12.86□□□□□ -0.35
LINC00963-216ENST00000623185 PSTPIP1O43586 416 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 NARSO43776 548 aaKnown RBP12.86□□□□□ -0.35
LINC00963-216ENST00000623185 TSPAN3O60637 253 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 SRGAP2O75044 1071 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 CLDN11O75508 207 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 LRIG2O94898 1065 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 ADH5P11766 374 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 TYRP14679 529 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 HOXC13P31276 330 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 GJA4P35212 333 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 EIF2DP41214 584 aaKnown RBP12.86□□□□□ -0.35
LINC00963-216ENST00000623185 ARSEP51690 589 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 CDH4P55283 916 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 ANO4Q32M45 955 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 PREPLQ4J6C6 727 aaPredicted RBP12.86□□□□□ -0.35
LINC00963-216ENST00000623185 KCNT1Q5JUK3 1230 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 FAM72AQ5TYM5 149 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 FAM72DQ6L9T8 149 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 PEX26Q7Z412 305 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 FAM72BQ86X60 149 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 CPNE8Q86YQ8 564 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 RCOR2Q8IZ40 523 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 PYROXD2Q8N2H3 581 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 KCTD6Q8NC69 237 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 HJURPQ8NCD3 748 aaPredicted RBP12.86□□□□□ -0.35
LINC00963-216ENST00000623185 FIBINQ8TAL6 211 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 IGSF8Q969P0 613 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 EXOC4Q96A65 974 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 RPRD1AQ96P16 312 aaPredicted RBP12.86□□□□□ -0.35
LINC00963-216ENST00000623185 ALS2CR12Q96Q35 445 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 XPO6Q96QU8 1125 aaKnown RBP12.86□□□□□ -0.35
LINC00963-216ENST00000623185 UHRF1Q96T88 793 aaPredicted RBP12.86□□□□□ -0.35
LINC00963-216ENST00000623185 EPAS1Q99814 870 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 ZYG11BQ9C0D3 744 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 PRDM16Q9HAZ2 1276 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 RCOR3Q9P2K3 495 aaPredicted RBP12.86□□□□□ -0.35
LINC00963-216ENST00000623185 VANGL2Q9ULK5 521 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 HYOU1Q9Y4L1 999 aa12.86□□□□□ -0.35
LINC00963-216ENST00000623185 NUP210Q8TEM1 1887 aaPredicted RBP12.86□□□□□ -0.35
LINC00963-216ENST00000623185 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.85□□□□□ -0.35
LINC00963-216ENST00000623185 A0A1B0GVM2 712 aa12.85□□□□□ -0.35
LINC00963-216ENST00000623185 TCAF2A6NFQ2 919 aa12.85□□□□□ -0.35
LINC00963-216ENST00000623185 WASH4PA8MWX3 477 aa12.85□□□□□ -0.35
LINC00963-216ENST00000623185 ZNF487B1APH4 448 aa12.85□□□□□ -0.35
LINC00963-216ENST00000623185 NEDD8-MDP1E9PL57 170 aa12.85□□□□□ -0.35
LINC00963-216ENST00000623185 MAN2B1O00754 1011 aa12.85□□□□□ -0.35
LINC00963-216ENST00000623185 CACNG3O60359 315 aa12.85□□□□□ -0.35
LINC00963-216ENST00000623185 TBL1XO60907 577 aa12.85□□□□□ -0.35
LINC00963-216ENST00000623185 ZRANB2O95218 330 aaKnown RBP eCLIP12.85□□□□□ -0.35
LINC00963-216ENST00000623185 RHOQP17081 205 aa12.85□□□□□ -0.35
LINC00963-216ENST00000623185 KDELR1P24390 212 aa12.85□□□□□ -0.35
LINC00963-216ENST00000623185 IL4RP24394 825 aa12.85□□□□□ -0.35
LINC00963-216ENST00000623185 CTNNA2P26232 953 aa12.85□□□□□ -0.35
LINC00963-216ENST00000623185 CTNNA1P35221 906 aaKnown RBP12.85□□□□□ -0.35
LINC00963-216ENST00000623185 PEX5P50542 639 aa12.85□□□□□ -0.35
LINC00963-216ENST00000623185 OXCT1P55809 520 aa12.85□□□□□ -0.35
LINC00963-216ENST00000623185 RPS24P62847 133 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms