RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 ARMCX5Q6P1M9 558 aa8.02□□□□□ -1.13
CBWD1-228ENST00000619157 ZC3H18Q86VM9 953 aaKnown RBP8.02□□□□□ -1.13
CBWD1-228ENST00000619157 CEP57L1Q8IYX8 460 aa8.02□□□□□ -1.13
CBWD1-228ENST00000619157 ITFG1Q8TB96 612 aa8.02□□□□□ -1.13
CBWD1-228ENST00000619157 GIPC2Q8TF65 315 aa8.02□□□□□ -1.13
CBWD1-228ENST00000619157 SMG7Q92540 1137 aaKnown RBP8.02□□□□□ -1.13
CBWD1-228ENST00000619157 ZSWIM3Q96MP5 696 aa8.02□□□□□ -1.13
CBWD1-228ENST00000619157 NECTIN4Q96NY8 510 aa8.02□□□□□ -1.13
CBWD1-228ENST00000619157 TSPAN18Q96SJ8 248 aa8.02□□□□□ -1.13
CBWD1-228ENST00000619157 LRFN3Q9BTN0 628 aa8.02□□□□□ -1.13
CBWD1-228ENST00000619157 MTMR12Q9C0I1 747 aa8.02□□□□□ -1.13
CBWD1-228ENST00000619157 PCDH18Q9HCL0 1135 aa8.02□□□□□ -1.13
CBWD1-228ENST00000619157 CD248Q9HCU0 757 aa8.02□□□□□ -1.13
CBWD1-228ENST00000619157 DNMT3BQ9UBC3 853 aaKnown RBP8.02□□□□□ -1.13
CBWD1-228ENST00000619157 PCDHGB7Q9Y5F8 929 aa8.02□□□□□ -1.13
CBWD1-228ENST00000619157 UBE4BO95155 1302 aa8.02□□□□□ -1.13
CBWD1-228ENST00000619157 MTCL1Q9Y4B5 1905 aaKnown RBP8.01□□□□□ -1.13
CBWD1-228ENST00000619157 DOCK8Q8NF50 2099 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 ARHGEF37A1IGU5 675 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 NPEPPSL1A6NEC2 478 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 GPR42O15529 346 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 PPM1BO75688 479 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 RHOBTB3O94955 611 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 IL18RAPO95256 599 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 LDHAP00338 332 aaKnown RBP8.01□□□□□ -1.13
CBWD1-228ENST00000619157 CYP1A1P04798 512 aaPredicted RBP8.01□□□□□ -1.13
CBWD1-228ENST00000619157 RPN1P04843 607 aaKnown RBP8.01□□□□□ -1.13
CBWD1-228ENST00000619157 TYMPP19971 482 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 HOXA9P31269 272 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 CCR2P41597 374 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 CASP4P49662 377 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 CYP2J2P51589 502 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 ARPP19P56211 112 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 TFAMQ00059 246 aaKnown RBP8.01□□□□□ -1.13
CBWD1-228ENST00000619157 KLF10Q13118 480 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 PTPN21Q16825 1174 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 KNOP1Q1ED39 458 aaKnown RBP8.01□□□□□ -1.13
CBWD1-228ENST00000619157 SLC5A9Q2M3M2 681 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 ZNF394Q53GI3 561 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 C1orf220Q5T0J3 134 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 WSCD1Q658N2 575 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 ZNF280DQ6N043 979 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 PDXDC1Q6P996 788 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 CCDC149Q6ZUS6 474 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 GRASPQ7Z6J2 395 aaPredicted RBP8.01□□□□□ -1.13
CBWD1-228ENST00000619157 LRRTM3Q86VH5 581 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 OSTM1Q86WC4 334 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 C12orf56Q8IXR9 622 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 TCEAL8Q8IYN2 117 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 ZNF461Q8TAF7 563 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 NOC3LQ8WTT2 800 aaKnown RBP8.01□□□□□ -1.13
CBWD1-228ENST00000619157 RSAD2Q8WXG1 361 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 EDAQ92838 391 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 ERCC4Q92889 916 aaPredicted RBP8.01□□□□□ -1.13
CBWD1-228ENST00000619157 PYM1Q9BRP8 204 aaKnown RBP8.01□□□□□ -1.13
CBWD1-228ENST00000619157 INTS13Q9NVM9 706 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 DMAC2Q9NW81 257 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 CEP72Q9P209 647 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 USP25Q9UHP3 1055 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 ING1Q9UK53 422 aaPredicted RBP8.01□□□□□ -1.13
CBWD1-228ENST00000619157 L1RE1Q9UN81 338 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 NME7Q9Y5B8 376 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 ATP6V1DQ9Y5K8 247 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 HS3ST3A1Q9Y663 406 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 MUC6Q6W4X9 2439 aa8.01□□□□□ -1.13
CBWD1-228ENST00000619157 COL4A3Q01955 1670 aa8□□□□□ -1.13
CBWD1-228ENST00000619157 TRBV23OR9-2A0A075B6M9 112 aa8□□□□□ -1.13
CBWD1-228ENST00000619157 MTMR11A4FU01 709 aa8□□□□□ -1.13
CBWD1-228ENST00000619157 ZNF233A6NK53 670 aa8□□□□□ -1.13
CBWD1-228ENST00000619157 H7C4K7 107 aa8□□□□□ -1.13
CBWD1-228ENST00000619157 XPOTO43592 962 aaKnown RBP8□□□□□ -1.13
CBWD1-228ENST00000619157 MOSPD3O75425 235 aa8□□□□□ -1.13
CBWD1-228ENST00000619157 SOAT2O75908 522 aa8□□□□□ -1.13
CBWD1-228ENST00000619157 PDGFBP01127 241 aaPredicted RBP8□□□□□ -1.13
CBWD1-228ENST00000619157 THBDP07204 575 aa8□□□□□ -1.13
CBWD1-228ENST00000619157 POU2F2P09086 479 aa8□□□□□ -1.13
CBWD1-228ENST00000619157 HNRNPA1P09651 372 aaKnown RBP eCLIP8□□□□□ -1.13
CBWD1-228ENST00000619157 TAF6P49848 677 aa8□□□□□ -1.13
CBWD1-228ENST00000619157 YWHAHQ04917 246 aaPredicted RBP8□□□□□ -1.13
CBWD1-228ENST00000619157 CYP24A1Q07973 514 aa8□□□□□ -1.13
CBWD1-228ENST00000619157 ADCY1Q08828 1119 aa8□□□□□ -1.13
CBWD1-228ENST00000619157 PNOCQ13519 176 aa8□□□□□ -1.13
CBWD1-228ENST00000619157 PSMD6Q15008 389 aa8□□□□□ -1.13
CBWD1-228ENST00000619157 SNRNP35Q16560 246 aaKnown RBP8□□□□□ -1.13
CBWD1-228ENST00000619157 ZCWPW2Q504Y3 356 aa8□□□□□ -1.13
CBWD1-228ENST00000619157 PPM1LQ5SGD2 360 aa8□□□□□ -1.13
CBWD1-228ENST00000619157 LIN9Q5TKA1 542 aa8□□□□□ -1.13
CBWD1-228ENST00000619157 CYP26C1Q6V0L0 522 aa8□□□□□ -1.13
CBWD1-228ENST00000619157 DSTYKQ6XUX3 929 aa8□□□□□ -1.13
CBWD1-228ENST00000619157 USP51Q70EK9 711 aa8□□□□□ -1.13
CBWD1-228ENST00000619157 GET4Q7L5D6 327 aaPredicted RBP8□□□□□ -1.13
CBWD1-228ENST00000619157 NT5DC4Q86YG4 428 aa8□□□□□ -1.13
CBWD1-228ENST00000619157 TDRD5Q8NAT2 981 aaKnown RBP8□□□□□ -1.13
CBWD1-228ENST00000619157 XXYLT1Q8NBI6 393 aa8□□□□□ -1.13
CBWD1-228ENST00000619157 ATAD1Q8NBU5 361 aa8□□□□□ -1.13
CBWD1-228ENST00000619157 APPL2Q8NEU8 664 aa8□□□□□ -1.13
CBWD1-228ENST00000619157 SPATA20Q8TB22 786 aa8□□□□□ -1.13
CBWD1-228ENST00000619157 TMEM174Q8WUU8 243 aa8□□□□□ -1.13
CBWD1-228ENST00000619157 PGLYRP2Q96PD5 576 aa8□□□□□ -1.13
CBWD1-228ENST00000619157 PKMYT1Q99640 499 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms