RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 BCAP29Q9UHQ4 241 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 RABGEF1Q9UJ41 708 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 CDY2AQ9Y6F7 541 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 WASF2Q9Y6W5 498 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 WDR81Q562E7 1941 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 ZBED1O96006 694 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 NCF2P19878 526 aaPredicted RBP7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 ENPEPQ07075 957 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 SLC10A6Q3KNW5 377 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 ALYREFQ86V81 257 aaKnown RBP7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 SPATA18Q8TC71 538 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 MIPOL1Q8TD10 442 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 DEPDC1BQ8WUY9 529 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 NKD2Q969F2 451 aaPredicted RBP7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 ECSITQ9BQ95 431 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 CCDC28BQ9BUN5 200 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 EIF2AQ9BY44 585 aaKnown RBP7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 FAM96AQ9H5X1 160 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 ASB7Q9H672 318 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 TLE6Q9H808 572 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 APOBEC3GQ9HC16 384 aaKnown RBP7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 PCMTD2Q9NV79 361 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 FETUBQ9UGM5 382 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 ZC3H7BQ9UGR2 993 aaKnown RBP7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 GTF2IRD1Q9UHL9 959 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 C2orf71A6NGG8 1288 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 KBTBD13C9JR72 458 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 MED7O43513 233 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 MAGEC1O60732 1142 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 CYP1A1P04798 512 aaPredicted RBP7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 PSMC1P62191 440 aaKnown RBP7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 ITGA7Q13683 1181 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 PLEKHG6Q3KR16 790 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 KBTBD12Q3ZCT8 623 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 KCNT1Q5JUK3 1230 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 EFHC1Q5JVL4 640 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 C15orf39Q6ZRI6 1047 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 NDUFAF2Q8N183 169 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 BANPQ8N9N5 519 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 WDR60Q8WVS4 1066 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 TMEM40Q8WWA1 233 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 ZNF606Q8WXB4 792 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 CDKL2Q92772 493 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 FERMT1Q9BQL6 677 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 C10orf88Q9H8K7 445 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 RAB6BQ9NRW1 208 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 SAE1Q9UBE0 346 aaPredicted RBP7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 GRID1Q9ULK0 1009 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 SOX13Q9UN79 622 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 FAM86C2PA6NEL3 165 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 B4GALT4O60513 344 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 ADAMTS4O75173 837 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 KLHL2O95198 593 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 TSHRP16473 764 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 MRPS6P82932 125 aaKnown RBP7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 CYP4A22Q5TCH4 519 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 SCYL2Q6P3W7 929 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 TTC7BQ86TV6 843 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 CHSY1Q86X52 802 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 ULK2Q8IYT8 1036 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 NXF3Q9H4D5 531 aaKnown RBP7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 NDUFA13Q9P0J0 144 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 TP73O15350 636 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 FAM189A1O60320 539 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 LSM8O95777 96 aaKnown RBP7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 ASS1P00966 412 aaKnown RBP7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 CFHP08603 1231 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 P4HA1P13674 534 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 AMPD1P23109 780 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 HOXA11P31270 313 aaPredicted RBP7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 STIP1P31948 543 aaKnown RBP7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 RPL22P35268 128 aaKnown RBP7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 COPAP53621 1224 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 PDE1BQ01064 536 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 SCARA3Q6AZY7 606 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 MARK2Q7KZI7 788 aaKnown RBP7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 SPATA24Q86W54 205 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 RBM15BQ8NDT2 890 aaKnown RBP7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 PHACTR1Q9C0D0 580 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 DPP3Q9NY33 737 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 TRPV2Q9Y5S1 764 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 PTCH2Q9Y6C5 1203 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 TM7SF2O76062 418 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 RECQL4O94761 1208 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 GRM5P41594 1212 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 EIF1AXP47813 144 aaKnown RBP7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 ACLYP53396 1101 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 CDH8P55286 799 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 ADAM17P78536 824 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 RBP5P82980 135 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 COG7P83436 770 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 BST1Q10588 318 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 TMEM130Q8N3G9 435 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 C1orf127Q8N9H9 656 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 RAB3IL1Q8TBN0 382 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 CPT1BQ92523 772 aa7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 EZH1Q92800 747 aaPredicted RBP7.19□□□□□ -1.26
SRGAP3-213ENST00000618999 HPDLQ96IR7 371 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms