RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 GPR174Q9BXC1 333 aa12.63□□□□□ -0.39
PDLIM2-218ENST00000614502 SLC6A17Q9H1V8 727 aa12.63□□□□□ -0.39
PDLIM2-218ENST00000614502 ST7Q9NRC1 585 aa12.63□□□□□ -0.39
PDLIM2-218ENST00000614502 DNAAF2Q9NVR5 837 aaKnown RBP12.63□□□□□ -0.39
PDLIM2-218ENST00000614502 GGA2Q9UJY4 613 aa12.63□□□□□ -0.39
PDLIM2-218ENST00000614502 CNTN6Q9UQ52 1028 aa12.63□□□□□ -0.39
PDLIM2-218ENST00000614502 TLR6Q9Y2C9 796 aa12.63□□□□□ -0.39
PDLIM2-218ENST00000614502 KNL1Q8NG31 2342 aa12.63□□□□□ -0.39
PDLIM2-218ENST00000614502 FREM2Q5SZK8 3169 aa12.63□□□□□ -0.39
PDLIM2-218ENST00000614502 MUC22E2RYF6 1773 aaPredicted RBP12.62□□□□□ -0.39
PDLIM2-218ENST00000614502 CAPN9O14815 690 aa12.62□□□□□ -0.39
PDLIM2-218ENST00000614502 MSI1O43347 362 aaKnown RBP12.62□□□□□ -0.39
PDLIM2-218ENST00000614502 TBL1XO60907 577 aa12.62□□□□□ -0.39
PDLIM2-218ENST00000614502 ASLP04424 464 aa12.62□□□□□ -0.39
PDLIM2-218ENST00000614502 DLDP09622 509 aaKnown RBP12.62□□□□□ -0.39
PDLIM2-218ENST00000614502 KRT5P13647 590 aa12.62□□□□□ -0.39
PDLIM2-218ENST00000614502 PRKCSHP14314 528 aaPredicted RBP12.62□□□□□ -0.39
PDLIM2-218ENST00000614502 PRKCHP24723 683 aa12.62□□□□□ -0.39
PDLIM2-218ENST00000614502 RPL34P49207 117 aaKnown RBP12.62□□□□□ -0.39
PDLIM2-218ENST00000614502 COPAP53621 1224 aa12.62□□□□□ -0.39
PDLIM2-218ENST00000614502 ST8SIA6P61647 398 aa12.62□□□□□ -0.39
PDLIM2-218ENST00000614502 FAM193AP78312 1265 aa12.62□□□□□ -0.39
PDLIM2-218ENST00000614502 MBLAC2Q68D91 279 aa12.62□□□□□ -0.39
PDLIM2-218ENST00000614502 PIP4P1Q86T03 277 aa12.62□□□□□ -0.39
PDLIM2-218ENST00000614502 P2RY11Q96G91 374 aa12.62□□□□□ -0.39
PDLIM2-218ENST00000614502 MED15Q96RN5 788 aa12.62□□□□□ -0.39
PDLIM2-218ENST00000614502 MIS12Q9H081 205 aa12.62□□□□□ -0.39
PDLIM2-218ENST00000614502 INTS2Q9H0H0 1204 aaKnown RBP12.62□□□□□ -0.39
PDLIM2-218ENST00000614502 LHX5Q9H2C1 402 aa12.62□□□□□ -0.39
PDLIM2-218ENST00000614502 TMEM245Q9H330 911 aa12.62□□□□□ -0.39
PDLIM2-218ENST00000614502 ABCB8Q9NUT2 735 aa12.62□□□□□ -0.39
PDLIM2-218ENST00000614502 KLK13Q9UKR3 277 aa12.62□□□□□ -0.39
PDLIM2-218ENST00000614502 CLEC4EQ9ULY5 219 aa12.62□□□□□ -0.39
PDLIM2-218ENST00000614502 SCML1Q9UN30 329 aa12.62□□□□□ -0.39
PDLIM2-218ENST00000614502 PCDHB9Q9Y5E1 797 aa12.62□□□□□ -0.39
PDLIM2-218ENST00000614502 PLXNB3Q9ULL4 1909 aa12.62□□□□□ -0.39
PDLIM2-218ENST00000614502 NUMA1Q14980 2115 aa12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 ANKRD11Q6UB99 2663 aaPredicted RBP12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 TMEM8BA6NDV4 472 aa12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 METTL12A8MUP2 240 aa12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 KCNJ18B7U540 433 aa12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 MOCS3O95396 460 aa12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 APOEP02649 317 aa12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 DNTTP04053 509 aa12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 C7P10643 843 aa12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 GPD2P43304 727 aa12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 STX17P56962 302 aa12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 SNX16P57768 344 aa12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 SIM1P81133 766 aaPredicted RBP12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 MTA1Q13330 715 aa12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 TTC31Q49AM3 519 aaPredicted RBP12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 DCAF12L1Q5VU92 463 aa12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 TMEM215Q68D42 235 aa12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 RBM43Q6ZSC3 357 aaKnown RBP12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 ARHGEF19Q8IW93 802 aa12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 MFN1Q8IWA4 741 aa12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 MLKLQ8NB16 471 aa12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 FIBINQ8TAL6 211 aa12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 SORCS1Q8WY21 1168 aa12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 KAT5Q92993 513 aa12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 UBE2TQ9NPD8 197 aaPredicted RBP12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 SLC12A6Q9UHW9 1150 aa12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 FASNP49327 2511 aaKnown RBP12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 NBEAQ8NFP9 2946 aa12.61□□□□□ -0.39
PDLIM2-218ENST00000614502 NYNRINQ9P2P1 1898 aaKnown RBP12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 SRRM3A6NNA2 597 aaPredicted RBP12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 PIK3R2O00459 728 aa12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 BCAT2O15382 392 aaPredicted RBP12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 RNASEH1O60930 286 aaKnown RBP12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 CER1O95813 267 aa12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 MBD3O95983 291 aa12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 ZNF883P0CG24 379 aa12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 GNA15P30679 374 aa12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 CDH18Q13634 790 aa12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 ZNF423Q2M1K9 1284 aa12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 FAM133BQ5BKY9 247 aaKnown RBP12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 ADIPOR2Q86V24 386 aa12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 SCUBE3Q8IX30 993 aa12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 ATP6V0D2Q8N8Y2 350 aa12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 KDM1BQ8NB78 822 aa12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 DQX1Q8TE96 717 aaKnown RBP12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 CLEC4CQ8WTT0 213 aa12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 CYB5D2Q8WUJ1 264 aa12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 ZNF606Q8WXB4 792 aa12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 ZCCHC14Q8WYQ9 949 aaKnown RBP12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 FCRL2Q96LA5 508 aaPredicted RBP12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 KREMEN1Q96MU8 473 aa12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 PPP1R9BQ96SB3 815 aa12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 ZSWIM1Q9BR11 485 aa12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 BTBD1Q9H0C5 482 aa12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 MIR1-1HGQ9H1L0 117 aa12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 POPDC2Q9HBU9 364 aa12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 TJP2Q9UDY2 1190 aa12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 RWDD2AQ9UIY3 292 aa12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 NCKAP1Q9Y2A7 1128 aa12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 PTPRBP23467 1997 aa12.6□□□□□ -0.39
PDLIM2-218ENST00000614502 LAMA5O15230 3695 aa12.59□□□□□ -0.39
PDLIM2-218ENST00000614502 GTPBP10A4D1E9 387 aaKnown RBP12.59□□□□□ -0.39
PDLIM2-218ENST00000614502 THAP12O43422 761 aa12.59□□□□□ -0.39
PDLIM2-218ENST00000614502 GABBR2O75899 941 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms