RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 LAMTOR4Q0VGL1 99 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 PWP1Q13610 501 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 RRP1BQ14684 758 aaKnown RBP17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 ZNF410Q86VK4 478 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 STK32AQ8WU08 396 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 SYT15Q9BQS2 421 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 PDCD2LQ9BRP1 358 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 MAP2K7O14733 419 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 GLI1P08151 1106 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 CLTBP09497 229 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 EIF4BP23588 611 aaKnown RBP17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 SERPINH1P50454 418 aaKnown RBP17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 EN1Q05925 392 aaPredicted RBP17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 EFEMP1Q12805 493 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 L3MBTL3Q96JM7 780 aaPredicted RBP17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 HDHD2Q9H0R4 259 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 DMGDHQ9UI17 866 aaKnown RBP17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 SF3B1O75533 1304 aaKnown RBP eCLIP17.79■□□□□ 0.445e-6■■■■■ 133
HMGXB3-206ENST00000613459 NCF1BA6NI72 391 aaPredicted RBP17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 NCF1CA8MVU1 366 aaPredicted RBP17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 FCHO1O14526 889 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 NCF1P14598 390 aaPredicted RBP17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 TTKP33981 857 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 CSE1LP55060 971 aaKnown RBP17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 NME5P56597 212 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 TOP3AQ13472 1001 aaPredicted RBP17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 PREPLQ4J6C6 727 aaPredicted RBP17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 GLRA4Q5JXX5 417 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 MIB1Q86YT6 1006 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 MIER2Q8N344 545 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 ARRDC4Q8NCT1 418 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 KCNK4Q9NYG8 393 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 ACTL7BQ9Y614 415 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 AK9Q5TCS8 1911 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 RTN3O95197 1032 aaPredicted RBP17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 CNPP09543 421 aaKnown RBP17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 ME2P23368 584 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 KATNAL2Q8IYT4 538 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 STK40Q8N2I9 435 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 ZCCHC9Q8N567 271 aaKnown RBP17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 RTL3Q8N8U3 475 aaKnown RBP17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 PANX3Q96QZ0 392 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 KCNQ5Q9NR82 932 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 KCND1Q9NSA2 647 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 PCDHB5Q9Y5E4 795 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 PPRC1Q5VV67 1664 aaKnown RBP17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 LINC00854A0A1B0GVQ3 168 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 TTLL13PA6NNM8 815 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 PIK3R1P27986 724 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 CYP2C18P33260 490 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 ELK3P41970 407 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 CDK16Q00536 496 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 ATAD3BQ5T9A4 648 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 MTSS1LQ765P7 747 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 TMEM132CQ8N3T6 1108 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 OR6Y1Q8NGX8 325 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 AENQ8WTP8 325 aaKnown RBP17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 SMARCD1Q96GM5 515 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 DUSP12Q9UNI6 340 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 A0A087WZ62 844 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 SLC2A4P14672 509 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 HPGDP15428 266 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 PPIL2Q13356 520 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 FASTKQ14296 549 aaKnown RBP17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 TSNQ15631 228 aaKnown RBP17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 SYTL5Q8TDW5 730 aaPredicted RBP17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 VIL1P09327 827 aaKnown RBP17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 HSMCR30P0CW71 290 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 PCNAP12004 261 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 HK2P52789 917 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 ITPK1Q13572 414 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 NTRK3Q16288 839 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 CASP12Q6UXS9 341 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 FAM83AQ86UY5 434 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 LRRC4BQ9NT99 713 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 NINJ2Q9NZG7 142 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 PNMA8BQ9ULN7 279 aaPredicted RBP17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 SPATA31A5Q5VU36 1347 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 SPATA31A7Q8IWB4 1347 aa17.78■□□□□ 0.44
HMGXB3-206ENST00000613459 DCDC2CA8MYV0 355 aa17.77■□□□□ 0.44
HMGXB3-206ENST00000613459 RAMP2O60895 175 aa17.77■□□□□ 0.44
HMGXB3-206ENST00000613459 B3GALNT2Q8NCR0 500 aa17.77■□□□□ 0.44
HMGXB3-206ENST00000613459 SLC5A5Q92911 643 aa17.77■□□□□ 0.44
HMGXB3-206ENST00000613459 PAIP1Q9H074 479 aaKnown RBP17.77■□□□□ 0.44
HMGXB3-206ENST00000613459 SEMA4AQ9H3S1 761 aa17.77■□□□□ 0.44
HMGXB3-206ENST00000613459 C1orf232A0A0U1RR37 186 aa17.77■□□□□ 0.44
HMGXB3-206ENST00000613459 CKMP06732 381 aa17.77■□□□□ 0.44
HMGXB3-206ENST00000613459 PAX3P23760 479 aa17.77■□□□□ 0.44
HMGXB3-206ENST00000613459 BRSK2Q8IWQ3 736 aa17.77■□□□□ 0.44
HMGXB3-206ENST00000613459 AADATQ8N5Z0 425 aa17.77■□□□□ 0.44
HMGXB3-206ENST00000613459 ZNF606Q8WXB4 792 aa17.77■□□□□ 0.44
HMGXB3-206ENST00000613459 RNFT2Q96EX2 444 aa17.77■□□□□ 0.44
HMGXB3-206ENST00000613459 NLNQ9BYT8 704 aa17.77■□□□□ 0.44
HMGXB3-206ENST00000613459 RAD18Q9NS91 495 aa17.77■□□□□ 0.44
HMGXB3-206ENST00000613459 ABCA9Q8IUA7 1624 aa17.77■□□□□ 0.44
HMGXB3-206ENST00000613459 BAIAP3O94812 1187 aa17.77■□□□□ 0.44
HMGXB3-206ENST00000613459 EZH2Q15910 746 aaKnown RBP17.77■□□□□ 0.44
HMGXB3-206ENST00000613459 AMHR2Q16671 573 aa17.77■□□□□ 0.44
HMGXB3-206ENST00000613459 MAGEB10Q96LZ2 347 aaPredicted RBP17.77■□□□□ 0.44
HMGXB3-206ENST00000613459 PHACTR1Q9C0D0 580 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms