RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 AIF1P55008 147 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 MLLT6P55198 1093 aaPredicted RBP7.94□□□□□ -1.14
MSH6-211ENST00000606499 SEMA3BQ13214 749 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 AUHQ13825 339 aaKnown RBP7.94□□□□□ -1.14
MSH6-211ENST00000606499 DPYSL2Q16555 572 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 EML3Q32P44 896 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 LY6G5CQ5SRR4 150 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 ZFYVE27Q5T4F4 411 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 MEI1Q5TIA1 1274 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 MANEALQ5VSG8 457 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 FBXL22Q6P050 247 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 TPGS1Q6ZTW0 290 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 TMEM25Q86YD3 366 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 ZNF683Q8IZ20 524 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 LGI2Q8N0V4 545 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 CPXM2Q8N436 756 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 SLC44A3Q8N4M1 653 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 ALG3Q92685 438 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 ATP2A3Q93084 1043 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 IGSF8Q969P0 613 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 AZIN2Q96A70 460 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 HES6Q96HZ4 224 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 HAPLN3Q96S86 360 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 PSMB7Q99436 277 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 FAM83CQ9BQN1 747 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 TRMT61BQ9BVS5 477 aaKnown RBP7.94□□□□□ -1.14
MSH6-211ENST00000606499 OSBPL2Q9H1P3 480 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 BRD9Q9H8M2 597 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 PCDH18Q9HCL0 1135 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 HPS4Q9NQG7 708 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 THG1LQ9NWX6 298 aaKnown RBP7.94□□□□□ -1.14
MSH6-211ENST00000606499 TBC1D14Q9P2M4 693 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 OR12D3Q9UGF7 316 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 AMFRQ9UKV5 643 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 ZNF510Q9Y2H8 683 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 BPTFQ12830 3046 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 NYNRINQ9P2P1 1898 aaKnown RBP7.94□□□□□ -1.14
MSH6-211ENST00000606499 IGLV3-10A0A075B6K4 115 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 CCDC66A2RUB6 948 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 LRRD1A4D1F6 860 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 C19orf67A6NJJ6 358 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 C3orf70A6NLC5 250 aaPredicted RBP7.93□□□□□ -1.14
MSH6-211ENST00000606499 MIF4GDA9UHW6 222 aaKnown RBP7.93□□□□□ -1.14
MSH6-211ENST00000606499 NEDD8-MDP1E9PL57 170 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 SLC9A3R1O14745 358 aaPredicted RBP7.93□□□□□ -1.14
MSH6-211ENST00000606499 FANCGO15287 622 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 CHADO15335 359 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 DDX3YO15523 660 aaKnown RBP7.93□□□□□ -1.14
MSH6-211ENST00000606499 TBL1XO60907 577 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 CNTN5O94779 1100 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 LRIG2O94898 1065 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 NFATC1O95644 943 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 GOT1P17174 413 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 CTNNA2P26232 953 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 CHKAP35790 457 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 PEX5P50542 639 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 ARSEP51690 589 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 CDH6P55285 790 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 GNG11P61952 73 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 RPS24P62847 133 aaKnown RBP7.93□□□□□ -1.14
MSH6-211ENST00000606499 NRG1Q02297 640 aaPredicted RBP7.93□□□□□ -1.14
MSH6-211ENST00000606499 MMRN1Q13201 1228 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 MTA1Q13330 715 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 ZNF211Q13398 564 aaPredicted RBP7.93□□□□□ -1.14
MSH6-211ENST00000606499 DPYSL3Q14195 570 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 KRT81Q14533 505 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 PDGFRLQ15198 375 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 DHCR24Q15392 516 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 BOLA3Q53S33 107 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 ALFQ53S48 1182 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 RABGAP1LQ5R372 815 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 LRRC38Q5VT99 294 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 DCAF12L1Q5VU92 463 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 FYB2Q5VWT5 728 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 RWDD4Q6NW29 188 aaKnown RBP7.93□□□□□ -1.14
MSH6-211ENST00000606499 RHBDF2Q6PJF5 856 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 ANKS1BQ7Z6G8 1248 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 ZSCAN30Q86W11 494 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 PSTKQ8IV42 348 aaKnown RBP7.93□□□□□ -1.14
MSH6-211ENST00000606499 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.93□□□□□ -1.14
MSH6-211ENST00000606499 KATNAL2Q8IYT4 538 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 ADGRG2Q8IZP9 1017 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 KIAA1958Q8N8K9 716 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 KCTD6Q8NC69 237 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 HJURPQ8NCD3 748 aaPredicted RBP7.93□□□□□ -1.14
MSH6-211ENST00000606499 DDI1Q8WTU0 396 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 RAPGEF5Q92565 580 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 IRF7Q92985 503 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 RNF25Q96BH1 459 aaPredicted RBP7.93□□□□□ -1.14
MSH6-211ENST00000606499 OTUB2Q96DC9 234 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 TBC1D31Q96DN5 1066 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 C1orf74Q96LT6 269 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 C16orf45Q96MC5 204 aaPredicted RBP7.93□□□□□ -1.14
MSH6-211ENST00000606499 RPRD1AQ96P16 312 aaPredicted RBP7.93□□□□□ -1.14
MSH6-211ENST00000606499 NECAB3Q96P71 396 aaPredicted RBP7.93□□□□□ -1.14
MSH6-211ENST00000606499 WDR24Q96S15 920 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 EPAS1Q99814 870 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 BBS2Q9BXC9 721 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 TLR10Q9BXR5 811 aa7.93□□□□□ -1.14
MSH6-211ENST00000606499 CALN1Q9BXU9 219 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms