RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 ST8SIA6P61647 398 aa18.54■□□□□ 0.56
SHKBP1-227ENST00000602011 PIK3R6Q5UE93 754 aa18.54■□□□□ 0.56
SHKBP1-227ENST00000602011 MBLAC2Q68D91 279 aa18.54■□□□□ 0.56
SHKBP1-227ENST00000602011 FOXR2Q6PJQ5 311 aa18.54■□□□□ 0.56
SHKBP1-227ENST00000602011 CCNI2Q6ZMN8 369 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-227ENST00000602011 USP30Q70CQ3 517 aa18.54■□□□□ 0.56
SHKBP1-227ENST00000602011 ELOA2Q8IYF1 753 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-227ENST00000602011 SMYD4Q8IYR2 804 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-227ENST00000602011 FMR1NBQ8N0W7 255 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-227ENST00000602011 UBR7Q8N806 425 aa18.54■□□□□ 0.56
SHKBP1-227ENST00000602011 FIBINQ8TAL6 211 aa18.54■□□□□ 0.56
SHKBP1-227ENST00000602011 UBA3Q8TBC4 463 aa18.54■□□□□ 0.56
SHKBP1-227ENST00000602011 SORCS1Q8WY21 1168 aa18.54■□□□□ 0.56
SHKBP1-227ENST00000602011 EDEM1Q92611 657 aa18.54■□□□□ 0.56
SHKBP1-227ENST00000602011 SLC35C1Q96A29 364 aa18.54■□□□□ 0.56
SHKBP1-227ENST00000602011 SKA1Q96BD8 255 aa18.54■□□□□ 0.56
SHKBP1-227ENST00000602011 DHTKD1Q96HY7 919 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-227ENST00000602011 CEP63Q96MT8 703 aa18.54■□□□□ 0.56
SHKBP1-227ENST00000602011 TIGD1Q96MW7 591 aa18.54■□□□□ 0.56
SHKBP1-227ENST00000602011 NT5C1BQ96P26 610 aa18.54■□□□□ 0.56
SHKBP1-227ENST00000602011 ABCB8Q9NUT2 735 aa18.54■□□□□ 0.56
SHKBP1-227ENST00000602011 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-227ENST00000602011 ADAMTS20P59510 1910 aa18.53■□□□□ 0.56
SHKBP1-227ENST00000602011 PSMA7O14818 248 aa18.53■□□□□ 0.56
SHKBP1-227ENST00000602011 ACSL4O60488 711 aa18.53■□□□□ 0.56
SHKBP1-227ENST00000602011 TSPAN3O60637 253 aa18.53■□□□□ 0.56
SHKBP1-227ENST00000602011 RNASEH1O60930 286 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-227ENST00000602011 IGLV3-27P01718 113 aa18.53■□□□□ 0.56
SHKBP1-227ENST00000602011 CD27P26842 260 aa18.53■□□□□ 0.56
SHKBP1-227ENST00000602011 NNTQ13423 1086 aa18.53■□□□□ 0.56
SHKBP1-227ENST00000602011 PNOCQ13519 176 aa18.53■□□□□ 0.56
SHKBP1-227ENST00000602011 ARID5BQ14865 1188 aa18.53■□□□□ 0.56
SHKBP1-227ENST00000602011 TMEM270Q6UE05 265 aa18.53■□□□□ 0.56
SHKBP1-227ENST00000602011 BEND5Q7L4P6 421 aa18.53■□□□□ 0.56
SHKBP1-227ENST00000602011 SMARCE1Q969G3 411 aa18.53■□□□□ 0.56
SHKBP1-227ENST00000602011 TTC17Q96AE7 1141 aa18.53■□□□□ 0.56
SHKBP1-227ENST00000602011 IL21RQ9HBE5 538 aa18.53■□□□□ 0.56
SHKBP1-227ENST00000602011 PRSS16Q9NQE7 514 aa18.53■□□□□ 0.56
SHKBP1-227ENST00000602011 PLXNB3Q9ULL4 1909 aa18.53■□□□□ 0.56
SHKBP1-227ENST00000602011 CELSR3Q9NYQ7 3312 aa18.52■□□□□ 0.56
SHKBP1-227ENST00000602011 SEMA4FO95754 770 aa18.52■□□□□ 0.56
SHKBP1-227ENST00000602011 LTFP02788 710 aa18.52■□□□□ 0.56
SHKBP1-227ENST00000602011 LCP1P13796 627 aa18.52■□□□□ 0.56
SHKBP1-227ENST00000602011 FMO5P49326 533 aa18.52■□□□□ 0.56
SHKBP1-227ENST00000602011 TBX4P57082 545 aa18.52■□□□□ 0.56
SHKBP1-227ENST00000602011 PTPRNQ16849 979 aa18.52■□□□□ 0.56
SHKBP1-227ENST00000602011 INAVAQ3KP66 663 aa18.52■□□□□ 0.56
SHKBP1-227ENST00000602011 ZNF776Q68DI1 518 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-227ENST00000602011 SLCO6A1Q86UG4 719 aa18.52■□□□□ 0.56
SHKBP1-227ENST00000602011 MARCH9Q86YJ5 346 aa18.52■□□□□ 0.56
SHKBP1-227ENST00000602011 GALNT15Q8N3T1 639 aa18.52■□□□□ 0.56
SHKBP1-227ENST00000602011 HJURPQ8NCD3 748 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-227ENST00000602011 RHBDD1Q8TEB9 315 aa18.52■□□□□ 0.56
SHKBP1-227ENST00000602011 NDRG1Q92597 394 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-227ENST00000602011 IGSF8Q969P0 613 aa18.52■□□□□ 0.56
SHKBP1-227ENST00000602011 CCDC86Q9H6F5 360 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-227ENST00000602011 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.52■□□□□ 0.56
SHKBP1-227ENST00000602011 GPSM3Q9Y4H4 160 aa18.52■□□□□ 0.56
SHKBP1-227ENST00000602011 PCDHB4Q9Y5E5 795 aa18.52■□□□□ 0.56
SHKBP1-227ENST00000602011 KNL1Q8NG31 2342 aa18.52■□□□□ 0.56
SHKBP1-227ENST00000602011 PCDHGA12O60330 932 aa18.51■□□□□ 0.55
SHKBP1-227ENST00000602011 TBL1XO60907 577 aa18.51■□□□□ 0.55
SHKBP1-227ENST00000602011 HLA-EP13747 358 aa18.51■□□□□ 0.55
SHKBP1-227ENST00000602011 ACSL1P33121 698 aa18.51■□□□□ 0.55
SHKBP1-227ENST00000602011 ACADSBP45954 432 aa18.51■□□□□ 0.55
SHKBP1-227ENST00000602011 CSNK1EP49674 416 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-227ENST00000602011 RPS14P62263 151 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-227ENST00000602011 GCNT1Q02742 428 aa18.51■□□□□ 0.55
SHKBP1-227ENST00000602011 MEA1Q16626 185 aa18.51■□□□□ 0.55
SHKBP1-227ENST00000602011 SMYD5Q6GMV2 418 aa18.51■□□□□ 0.55
SHKBP1-227ENST00000602011 PMF1Q6P1K2 205 aa18.51■□□□□ 0.55
SHKBP1-227ENST00000602011 TMPRSS7Q7RTY8 843 aa18.51■□□□□ 0.55
SHKBP1-227ENST00000602011 FAM124AQ86V42 546 aa18.51■□□□□ 0.55
SHKBP1-227ENST00000602011 CACUL1Q86Y37 369 aa18.51■□□□□ 0.55
SHKBP1-227ENST00000602011 BAHD1Q8TBE0 780 aaPredicted RBP18.51■□□□□ 0.55
SHKBP1-227ENST00000602011 MDM1Q8TC05 714 aa18.51■□□□□ 0.55
SHKBP1-227ENST00000602011 CYB5D2Q8WUJ1 264 aa18.51■□□□□ 0.55
SHKBP1-227ENST00000602011 SERPINB11Q96P15 392 aa18.51■□□□□ 0.55
SHKBP1-227ENST00000602011 RSPH9Q9H1X1 276 aaPredicted RBP18.51■□□□□ 0.55
SHKBP1-227ENST00000602011 ANKRD6Q9Y2G4 727 aa18.51■□□□□ 0.55
SHKBP1-227ENST00000602011 LOC400499M0QZD8 3231 aa18.51■□□□□ 0.55
SHKBP1-227ENST00000602011 CABIN1Q9Y6J0 2220 aa18.5■□□□□ 0.55
SHKBP1-227ENST00000602011 A0A1B0GVT2 93 aa18.5■□□□□ 0.55
SHKBP1-227ENST00000602011 TARSL2A2RTX5 802 aaKnown RBP18.5■□□□□ 0.55
SHKBP1-227ENST00000602011 PAPSS1O43252 624 aaPredicted RBP18.5■□□□□ 0.55
SHKBP1-227ENST00000602011 DKK1O94907 266 aa18.5■□□□□ 0.55
SHKBP1-227ENST00000602011 MOCS3O95396 460 aa18.5■□□□□ 0.55
SHKBP1-227ENST00000602011 CDK4P11802 303 aa18.5■□□□□ 0.55
SHKBP1-227ENST00000602011 GRK6P43250 576 aa18.5■□□□□ 0.55
SHKBP1-227ENST00000602011 KIF19Q2TAC6 998 aa18.5■□□□□ 0.55
SHKBP1-227ENST00000602011 COL28A1Q2UY09 1125 aa18.5■□□□□ 0.55
SHKBP1-227ENST00000602011 MFN1Q8IWA4 741 aa18.5■□□□□ 0.55
SHKBP1-227ENST00000602011 STK32AQ8WU08 396 aa18.5■□□□□ 0.55
SHKBP1-227ENST00000602011 SNX19Q92543 992 aa18.5■□□□□ 0.55
SHKBP1-227ENST00000602011 BIRC7Q96CA5 298 aa18.5■□□□□ 0.55
SHKBP1-227ENST00000602011 C6orf106Q9H6K1 298 aaPredicted RBP18.5■□□□□ 0.55
SHKBP1-227ENST00000602011 TM9SF3Q9HD45 589 aa18.5■□□□□ 0.55
SHKBP1-227ENST00000602011 DKK4Q9UBT3 224 aa18.5■□□□□ 0.55
SHKBP1-227ENST00000602011 TLR6Q9Y2C9 796 aa18.5■□□□□ 0.55
SHKBP1-227ENST00000602011 FNDC3AQ9Y2H6 1198 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms