RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 CHRNA1P02708 482 aa23.35■■□□□ 1.33
SRRM1-222ENST00000596378 ERCC2P18074 760 aa23.35■■□□□ 1.33
SRRM1-222ENST00000596378 CTGFP29279 349 aa23.35■■□□□ 1.33
SRRM1-222ENST00000596378 ARFIP2P53365 341 aa23.35■■□□□ 1.33
SRRM1-222ENST00000596378 CTC1Q2NKJ3 1217 aa23.35■■□□□ 1.33
SRRM1-222ENST00000596378 LRRC8BQ6P9F7 803 aa23.35■■□□□ 1.33
SRRM1-222ENST00000596378 ZNF398Q8TD17 642 aa23.35■■□□□ 1.33
SRRM1-222ENST00000596378 PGBD4Q96DM1 585 aa23.35■■□□□ 1.33
SRRM1-222ENST00000596378 SDR42E2A6NKP2 422 aa23.34■■□□□ 1.33
SRRM1-222ENST00000596378 TNPO2O14787 897 aaKnown RBP23.34■■□□□ 1.33
SRRM1-222ENST00000596378 STK10O94804 968 aaKnown RBP23.34■■□□□ 1.33
SRRM1-222ENST00000596378 DLDP09622 509 aaKnown RBP23.34■■□□□ 1.33
SRRM1-222ENST00000596378 IRX4P78413 519 aa23.34■■□□□ 1.33
SRRM1-222ENST00000596378 PAFAH1B3Q15102 231 aaKnown RBP23.34■■□□□ 1.33
SRRM1-222ENST00000596378 FAM237BA0A1B0GVD1 139 aa23.34■■□□□ 1.33
SRRM1-222ENST00000596378 AKR1A1P14550 325 aa23.34■■□□□ 1.33
SRRM1-222ENST00000596378 SERPINB3P29508 390 aa23.34■■□□□ 1.33
SRRM1-222ENST00000596378 SLC8A1P32418 973 aa23.34■■□□□ 1.33
SRRM1-222ENST00000596378 PREPLQ4J6C6 727 aaPredicted RBP23.34■■□□□ 1.33
SRRM1-222ENST00000596378 STEAP4Q687X5 459 aa23.34■■□□□ 1.33
SRRM1-222ENST00000596378 AGMOQ6ZNB7 445 aa23.34■■□□□ 1.33
SRRM1-222ENST00000596378 AGAP3Q96P47 875 aa23.34■■□□□ 1.33
SRRM1-222ENST00000596378 SLC38A7Q9NVC3 462 aa23.34■■□□□ 1.33
SRRM1-222ENST00000596378 DDIT4Q9NX09 232 aa23.34■■□□□ 1.33
SRRM1-222ENST00000596378 PSAT1Q9Y617 370 aa23.34■■□□□ 1.33
SRRM1-222ENST00000596378 PPP1R12AO14974 1030 aaPredicted RBP23.33■■□□□ 1.33
SRRM1-222ENST00000596378 USP12O75317 370 aa23.33■■□□□ 1.33
SRRM1-222ENST00000596378 ATP5HO75947 161 aa23.33■■□□□ 1.33
SRRM1-222ENST00000596378 BST1Q10588 318 aa23.33■■□□□ 1.33
SRRM1-222ENST00000596378 PID1Q7Z2X4 250 aa23.33■■□□□ 1.33
SRRM1-222ENST00000596378 HACE1Q8IYU2 909 aa23.33■■□□□ 1.33
SRRM1-222ENST00000596378 NPWQ8N729 165 aa23.33■■□□□ 1.33
SRRM1-222ENST00000596378 MTBPQ96DY7 904 aa23.33■■□□□ 1.33
SRRM1-222ENST00000596378 AGO3Q9H9G7 860 aaKnown RBP23.33■■□□□ 1.33
SRRM1-222ENST00000596378 MLNP12872 115 aa23.33■■□□□ 1.33
SRRM1-222ENST00000596378 EPHB2P29323 1055 aa23.33■■□□□ 1.33
SRRM1-222ENST00000596378 LHX1P48742 406 aa23.33■■□□□ 1.33
SRRM1-222ENST00000596378 TMPRSS15P98073 1019 aa23.33■■□□□ 1.33
SRRM1-222ENST00000596378 CRYMQ14894 314 aa23.33■■□□□ 1.33
SRRM1-222ENST00000596378 CHI3L2Q15782 390 aa23.33■■□□□ 1.33
SRRM1-222ENST00000596378 TBC1D10AQ9BXI6 508 aa23.33■■□□□ 1.33
SRRM1-222ENST00000596378 NUP205Q92621 2012 aa23.32■■□□□ 1.32
SRRM1-222ENST00000596378 ALDH1A2O94788 518 aa23.32■■□□□ 1.32
SRRM1-222ENST00000596378 IGHA2P01877 340 aa23.32■■□□□ 1.32
SRRM1-222ENST00000596378 F7P08709 466 aaPredicted RBP23.32■■□□□ 1.32
SRRM1-222ENST00000596378 MYL2P10916 166 aa23.32■■□□□ 1.32
SRRM1-222ENST00000596378 TPI1P60174 286 aa23.32■■□□□ 1.32
SRRM1-222ENST00000596378 NIPAL4Q0D2K0 466 aa23.32■■□□□ 1.32
SRRM1-222ENST00000596378 IFRD2Q12894 506 aaPredicted RBP23.32■■□□□ 1.32
SRRM1-222ENST00000596378 PARP6Q2NL67 630 aa23.32■■□□□ 1.32
SRRM1-222ENST00000596378 ACCSLQ4AC99 568 aa23.32■■□□□ 1.32
SRRM1-222ENST00000596378 TIGD5Q53EQ6 642 aa23.32■■□□□ 1.32
SRRM1-222ENST00000596378 WLSQ5T9L3 541 aa23.32■■□□□ 1.32
SRRM1-222ENST00000596378 HASPINQ8TF76 798 aa23.32■■□□□ 1.32
SRRM1-222ENST00000596378 RAB3IPQ96QF0 476 aaPredicted RBP23.32■■□□□ 1.32
SRRM1-222ENST00000596378 GORASP1Q9BQQ3 440 aa23.32■■□□□ 1.32
SRRM1-222ENST00000596378 KLHL8Q9P2G9 620 aaPredicted RBP23.32■■□□□ 1.32
SRRM1-222ENST00000596378 SF3B1O75533 1304 aaKnown RBP eCLIP23.32■■□□□ 1.32
SRRM1-222ENST00000596378 HHLA1C9JL84 531 aa23.32■■□□□ 1.32
SRRM1-222ENST00000596378 FBXO21O94952 628 aa23.32■■□□□ 1.32
SRRM1-222ENST00000596378 LTFP02788 710 aa23.32■■□□□ 1.32
SRRM1-222ENST00000596378 CDK16Q00536 496 aa23.32■■□□□ 1.32
SRRM1-222ENST00000596378 ZCCHC23Q6ZST2 131 aa23.32■■□□□ 1.32
SRRM1-222ENST00000596378 BHLHA9Q7RTU4 235 aa23.32■■□□□ 1.32
SRRM1-222ENST00000596378 TTC7BQ86TV6 843 aa23.32■■□□□ 1.32
SRRM1-222ENST00000596378 E2F7Q96AV8 911 aa23.32■■□□□ 1.32
SRRM1-222ENST00000596378 SENP6Q9GZR1 1112 aaPredicted RBP23.32■■□□□ 1.32
SRRM1-222ENST00000596378 EIF2B3Q9NR50 452 aaKnown RBP23.32■■□□□ 1.32
SRRM1-222ENST00000596378 SHROOM3Q8TF72 1996 aa23.32■■□□□ 1.32
SRRM1-222ENST00000596378 PTPN3P26045 913 aa23.31■■□□□ 1.32
SRRM1-222ENST00000596378 SERPINB9P50453 376 aa23.31■■□□□ 1.32
SRRM1-222ENST00000596378 SEMA3BQ13214 749 aa23.31■■□□□ 1.32
SRRM1-222ENST00000596378 RAB41Q5JT25 222 aa23.31■■□□□ 1.32
SRRM1-222ENST00000596378 C16orf46Q6P387 395 aa23.31■■□□□ 1.32
SRRM1-222ENST00000596378 LONP2Q86WA8 852 aa23.31■■□□□ 1.32
SRRM1-222ENST00000596378 TMEM86AQ8N2M4 240 aa23.31■■□□□ 1.32
SRRM1-222ENST00000596378 OR52K1Q8NGK4 314 aa23.31■■□□□ 1.32
SRRM1-222ENST00000596378 INPP5DQ92835 1189 aa23.31■■□□□ 1.32
SRRM1-222ENST00000596378 RTP3Q9BQQ7 232 aa23.31■■□□□ 1.32
SRRM1-222ENST00000596378 CNGB3Q9NQW8 809 aa23.31■■□□□ 1.32
SRRM1-222ENST00000596378 ARL8BQ9NVJ2 186 aa23.31■■□□□ 1.32
SRRM1-222ENST00000596378 MKS1Q9NXB0 559 aa23.31■■□□□ 1.32
SRRM1-222ENST00000596378 FBXW11Q9UKB1 542 aa23.31■■□□□ 1.32
SRRM1-222ENST00000596378 KLF11O14901 512 aa23.31■■□□□ 1.32
SRRM1-222ENST00000596378 DUSP11O75319 330 aaKnown RBP23.31■■□□□ 1.32
SRRM1-222ENST00000596378 TGDSO95455 350 aa23.31■■□□□ 1.32
SRRM1-222ENST00000596378 POMCP01189 267 aa23.31■■□□□ 1.32
SRRM1-222ENST00000596378 MYCNP04198 464 aaPredicted RBP23.31■■□□□ 1.32
SRRM1-222ENST00000596378 PGAM1P18669 254 aa23.31■■□□□ 1.32
SRRM1-222ENST00000596378 PACS1Q6VY07 963 aa23.31■■□□□ 1.32
SRRM1-222ENST00000596378 MARK2Q7KZI7 788 aaKnown RBP23.31■■□□□ 1.32
SRRM1-222ENST00000596378 NUDCD3Q8IVD9 361 aa23.31■■□□□ 1.32
SRRM1-222ENST00000596378 STKLD1Q8NE28 680 aa23.31■■□□□ 1.32
SRRM1-222ENST00000596378 MYLPFQ96A32 169 aa23.31■■□□□ 1.32
SRRM1-222ENST00000596378 SKA1Q96BD8 255 aa23.31■■□□□ 1.32
SRRM1-222ENST00000596378 FERMT1Q9BQL6 677 aa23.31■■□□□ 1.32
SRRM1-222ENST00000596378 MTG1Q9BT17 334 aaPredicted RBP23.31■■□□□ 1.32
SRRM1-222ENST00000596378 C20orf27Q9GZN8 174 aa23.31■■□□□ 1.32
SRRM1-222ENST00000596378 XPNPEP3Q9NQH7 507 aa23.31■■□□□ 1.32
SRRM1-222ENST00000596378 MARCOQ9UEW3 520 aaPredicted RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms