RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 HPSEQ9Y251 543 aa14.37□□□□□ -0.11
SHKBP1-208ENST00000595726 ZNF510Q9Y2H8 683 aa14.37□□□□□ -0.11
SHKBP1-208ENST00000595726 A0A1B0GVL5 298 aa14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 TLR4O00206 839 aa14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 TRIM38O00635 465 aa14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 EIF3DO15371 548 aaKnown RBP eCLIP14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 ACTN4O43707 911 aaKnown RBP14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 SDC3O75056 442 aa14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 FAM200BP0CF97 657 aa14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 CMA1P23946 247 aa14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 ATICP31939 592 aa14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 AFMP43652 599 aa14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 ARRB1P49407 418 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 CYP2J2P51589 502 aa14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 NXPH1P58417 271 aa14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 GABREP78334 506 aa14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 NFATC3Q12968 1075 aa14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 E2F5Q15329 346 aa14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 ZNF699Q32M78 642 aa14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 PROX2Q3B8N5 592 aa14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 TTC31Q49AM3 519 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 FAM26FQ5R3K3 315 aa14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 CLEC20AQ6ZU45 233 aa14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 UNC13DQ70J99 1090 aa14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 CHST9Q7L1S5 443 aa14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 ADIPOR2Q86V24 386 aa14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 SPATS2Q86XZ4 545 aaKnown RBP14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 GRAMD1CQ8IYS0 662 aa14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 KIAA1586Q9HCI6 787 aa14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 ABCB8Q9NUT2 735 aa14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 SERTAD1Q9UHV2 236 aa14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 NCKAP1Q9Y2A7 1128 aa14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 TP53BP1Q12888 1972 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-208ENST00000595726 TGFB1I1O43294 461 aa14.35□□□□□ -0.11
SHKBP1-208ENST00000595726 SIGLEC6O43699 453 aa14.35□□□□□ -0.11
SHKBP1-208ENST00000595726 USP12O75317 370 aa14.35□□□□□ -0.11
SHKBP1-208ENST00000595726 SLFN14P0C7P3 912 aa14.35□□□□□ -0.11
SHKBP1-208ENST00000595726 ACP1P24666 158 aa14.35□□□□□ -0.11
SHKBP1-208ENST00000595726 HOXD9P28356 352 aaPredicted RBP14.35□□□□□ -0.11
SHKBP1-208ENST00000595726 COG7P83436 770 aa14.35□□□□□ -0.11
SHKBP1-208ENST00000595726 NFKB2Q00653 900 aa14.35□□□□□ -0.11
SHKBP1-208ENST00000595726 CUL4BQ13620 913 aa14.35□□□□□ -0.11
SHKBP1-208ENST00000595726 ZNF667Q5HYK9 610 aa14.35□□□□□ -0.11
SHKBP1-208ENST00000595726 ZNF776Q68DI1 518 aaPredicted RBP14.35□□□□□ -0.11
SHKBP1-208ENST00000595726 STXBP4Q6ZWJ1 553 aa14.35□□□□□ -0.11
SHKBP1-208ENST00000595726 EPM2AIP1Q7L775 607 aaPredicted RBP14.35□□□□□ -0.11
SHKBP1-208ENST00000595726 CEP57L1Q8IYX8 460 aa14.35□□□□□ -0.11
SHKBP1-208ENST00000595726 CRYBG2Q8N1P7 616 aa14.35□□□□□ -0.11
SHKBP1-208ENST00000595726 EXD3Q8N9H8 876 aa14.35□□□□□ -0.11
SHKBP1-208ENST00000595726 PLEKHO2Q8TD55 490 aa14.35□□□□□ -0.11
SHKBP1-208ENST00000595726 SNRNP27Q8WVK2 155 aaKnown RBP14.35□□□□□ -0.11
SHKBP1-208ENST00000595726 SERAC1Q96JX3 654 aa14.35□□□□□ -0.11
SHKBP1-208ENST00000595726 DCLK3Q9C098 648 aa14.35□□□□□ -0.11
SHKBP1-208ENST00000595726 SCAND2PQ9GZW5 306 aaPredicted RBP14.35□□□□□ -0.11
SHKBP1-208ENST00000595726 PABPC3Q9H361 631 aaKnown RBP14.35□□□□□ -0.11
SHKBP1-208ENST00000595726 CAAP1Q9H8G2 361 aa14.35□□□□□ -0.11
SHKBP1-208ENST00000595726 RELNP78509 3460 aa14.35□□□□□ -0.11
SHKBP1-208ENST00000595726 DOPEY2Q9Y3R5 2298 aa14.35□□□□□ -0.11
SHKBP1-208ENST00000595726 LRRK2Q5S007 2527 aa14.35□□□□□ -0.11
SHKBP1-208ENST00000595726 FAM237AA0A1B0GTK4 181 aa14.34□□□□□ -0.11
SHKBP1-208ENST00000595726 A0A1W2PP55 124 aa14.34□□□□□ -0.11
SHKBP1-208ENST00000595726 SLC12A8A0AV02 714 aa14.34□□□□□ -0.11
SHKBP1-208ENST00000595726 YKT6O15498 198 aa14.34□□□□□ -0.11
SHKBP1-208ENST00000595726 KIF20AO95235 890 aa14.34□□□□□ -0.11
SHKBP1-208ENST00000595726 MYF5P13349 255 aa14.34□□□□□ -0.11
SHKBP1-208ENST00000595726 RXRGP48443 463 aa14.34□□□□□ -0.11
SHKBP1-208ENST00000595726 KIF11P52732 1056 aa14.34□□□□□ -0.11
SHKBP1-208ENST00000595726 BIRC3Q13489 604 aa14.34□□□□□ -0.11
SHKBP1-208ENST00000595726 BMT2Q1RMZ1 405 aa14.34□□□□□ -0.11
SHKBP1-208ENST00000595726 PIAS4Q8N2W9 510 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-208ENST00000595726 CPXM2Q8N436 756 aa14.34□□□□□ -0.11
SHKBP1-208ENST00000595726 VCPIP1Q96JH7 1222 aa14.34□□□□□ -0.11
SHKBP1-208ENST00000595726 OSBPL2Q9H1P3 480 aa14.34□□□□□ -0.11
SHKBP1-208ENST00000595726 RSPH9Q9H1X1 276 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-208ENST00000595726 GDPD2Q9HCC8 539 aa14.34□□□□□ -0.11
SHKBP1-208ENST00000595726 ASCL3Q9NQ33 180 aa14.34□□□□□ -0.11
SHKBP1-208ENST00000595726 AGPAT3Q9NRZ7 376 aa14.34□□□□□ -0.11
SHKBP1-208ENST00000595726 PCDHA5Q9Y5H7 936 aa14.34□□□□□ -0.11
SHKBP1-208ENST00000595726 UBE4BO95155 1302 aa14.34□□□□□ -0.11
SHKBP1-208ENST00000595726 MYO9AB2RTY4 2548 aa14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 PVALEFA0A1B0GWK0 134 aa14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 K7ENP7 123 aa14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 MID1O15344 667 aa14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 KLRC4O43908 158 aa14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 RNASEH2AO75792 299 aaKnown RBP14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 VNN1O95497 513 aa14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 DLDP09622 509 aaKnown RBP14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 RALAP11233 206 aa14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 NDUFA8P51970 172 aa14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 E2F1Q01094 437 aa14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 NCOA4Q13772 614 aa14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 MBLAC2Q68D91 279 aa14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 INO80CQ6PI98 192 aaPredicted RBP14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 USP30Q70CQ3 517 aa14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 SLC25A45Q8N413 288 aa14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 OR2T34Q8NGX1 318 aa14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 ZNF507Q8TCN5 953 aa14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 WFDC5Q8TCV5 224 aa14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 GOLGA1Q92805 767 aa14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 CYFIP2Q96F07 1278 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms