RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 GPATCH2LQ9NWQ4 482 aa23.31■■□□□ 1.32
SNRNP70-204ENST00000595231 VANGL2Q9ULK5 521 aa23.31■■□□□ 1.32
SNRNP70-204ENST00000595231 AP4E1Q9UPM8 1137 aa23.31■■□□□ 1.32
SNRNP70-204ENST00000595231 BDP1A6H8Y1 2624 aa23.31■■□□□ 1.32
SNRNP70-204ENST00000595231 HOXC11O43248 304 aaPredicted RBP23.3■■□□□ 1.32
SNRNP70-204ENST00000595231 ADH1CP00326 375 aa23.3■■□□□ 1.32
SNRNP70-204ENST00000595231 PENKP01210 267 aaPredicted RBP23.3■■□□□ 1.32
SNRNP70-204ENST00000595231 RARAP10276 462 aa23.3■■□□□ 1.32
SNRNP70-204ENST00000595231 ADH5P11766 374 aa23.3■■□□□ 1.32
SNRNP70-204ENST00000595231 GJA4P35212 333 aa23.3■■□□□ 1.32
SNRNP70-204ENST00000595231 NRG1Q02297 640 aaPredicted RBP23.3■■□□□ 1.32
SNRNP70-204ENST00000595231 SEMA3BQ13214 749 aa23.3■■□□□ 1.32
SNRNP70-204ENST00000595231 SMTNL2Q2TAL5 461 aa23.3■■□□□ 1.32
SNRNP70-204ENST00000595231 ANO4Q32M45 955 aa23.3■■□□□ 1.32
SNRNP70-204ENST00000595231 C5orf22Q49AR2 442 aa23.3■■□□□ 1.32
SNRNP70-204ENST00000595231 ATP13A4Q4VNC1 1196 aa23.3■■□□□ 1.32
SNRNP70-204ENST00000595231 MPPE1Q53F39 396 aa23.3■■□□□ 1.32
SNRNP70-204ENST00000595231 EFHC2Q5JST6 749 aa23.3■■□□□ 1.32
SNRNP70-204ENST00000595231 PSTKQ8IV42 348 aaKnown RBP23.3■■□□□ 1.32
SNRNP70-204ENST00000595231 CFAP52Q8N1V2 620 aa23.3■■□□□ 1.32
SNRNP70-204ENST00000595231 BHMTQ93088 406 aa23.3■■□□□ 1.32
SNRNP70-204ENST00000595231 IGSF8Q969P0 613 aa23.3■■□□□ 1.32
SNRNP70-204ENST00000595231 BBS2Q9BXC9 721 aa23.3■■□□□ 1.32
SNRNP70-204ENST00000595231 ZWILCHQ9H900 591 aa23.3■■□□□ 1.32
SNRNP70-204ENST00000595231 PLK2Q9NYY3 685 aa23.3■■□□□ 1.32
SNRNP70-204ENST00000595231 CAPN6Q9Y6Q1 641 aa23.3■■□□□ 1.32
SNRNP70-204ENST00000595231 IGLV3-10A0A075B6K4 115 aa23.29■■□□□ 1.32
SNRNP70-204ENST00000595231 F5H5T6 163 aa23.29■■□□□ 1.32
SNRNP70-204ENST00000595231 TYRP14679 529 aa23.29■■□□□ 1.32
SNRNP70-204ENST00000595231 SSR1P43307 286 aaKnown RBP23.29■■□□□ 1.32
SNRNP70-204ENST00000595231 SOX9P48436 509 aa23.29■■□□□ 1.32
SNRNP70-204ENST00000595231 RPS24P62847 133 aaKnown RBP23.29■■□□□ 1.32
SNRNP70-204ENST00000595231 GAD2Q05329 585 aa23.29■■□□□ 1.32
SNRNP70-204ENST00000595231 NR1H3Q13133 447 aa23.29■■□□□ 1.32
SNRNP70-204ENST00000595231 IFI16Q16666 785 aaKnown RBP23.29■■□□□ 1.32
SNRNP70-204ENST00000595231 HADHQ16836 314 aaKnown RBP23.29■■□□□ 1.32
SNRNP70-204ENST00000595231 MANEALQ5VSG8 457 aa23.29■■□□□ 1.32
SNRNP70-204ENST00000595231 RNF43Q68DV7 783 aa23.29■■□□□ 1.32
SNRNP70-204ENST00000595231 DDI1Q8WTU0 396 aa23.29■■□□□ 1.32
SNRNP70-204ENST00000595231 SHISA7A6NL88 538 aa23.28■■□□□ 1.32
SNRNP70-204ENST00000595231 DRGXA6NNA5 263 aa23.28■■□□□ 1.32
SNRNP70-204ENST00000595231 E9PAM4 449 aa23.28■■□□□ 1.32
SNRNP70-204ENST00000595231 NEDD8-MDP1E9PL57 170 aa23.28■■□□□ 1.32
SNRNP70-204ENST00000595231 HOXD9P28356 352 aaPredicted RBP23.28■■□□□ 1.32
SNRNP70-204ENST00000595231 IRAK1P51617 712 aa23.28■■□□□ 1.32
SNRNP70-204ENST00000595231 SLC44A4Q53GD3 710 aa23.28■■□□□ 1.32
SNRNP70-204ENST00000595231 MPP7Q5T2T1 576 aa23.28■■□□□ 1.32
SNRNP70-204ENST00000595231 KIAA1524Q8TCG1 905 aa23.28■■□□□ 1.32
SNRNP70-204ENST00000595231 TEKT4Q8WW24 435 aa23.28■■□□□ 1.32
SNRNP70-204ENST00000595231 DHX35Q9H5Z1 703 aaKnown RBP23.28■■□□□ 1.32
SNRNP70-204ENST00000595231 WNT16Q9UBV4 365 aa23.28■■□□□ 1.32
SNRNP70-204ENST00000595231 NEU3Q9UQ49 428 aa23.28■■□□□ 1.32
SNRNP70-204ENST00000595231 TTC28Q96AY4 2481 aa23.28■■□□□ 1.32
SNRNP70-204ENST00000595231 ZSCAN12O43309 604 aa23.28■■□□□ 1.32
SNRNP70-204ENST00000595231 SRGAP2O75044 1071 aa23.28■■□□□ 1.32
SNRNP70-204ENST00000595231 PALMO75781 387 aa23.28■■□□□ 1.32
SNRNP70-204ENST00000595231 CYBBP04839 570 aa23.28■■□□□ 1.32
SNRNP70-204ENST00000595231 L1CAMP32004 1257 aa23.28■■□□□ 1.32
SNRNP70-204ENST00000595231 POLNQ7Z5Q5 900 aa23.28■■□□□ 1.32
SNRNP70-204ENST00000595231 C12orf40Q86WS4 652 aa23.28■■□□□ 1.32
SNRNP70-204ENST00000595231 CD101Q93033 1021 aa23.28■■□□□ 1.32
SNRNP70-204ENST00000595231 RPRD1AQ96P16 312 aaPredicted RBP23.28■■□□□ 1.32
SNRNP70-204ENST00000595231 TRMT1Q9NXH9 659 aaKnown RBP23.28■■□□□ 1.32
SNRNP70-204ENST00000595231 CLEC4EQ9ULY5 219 aa23.28■■□□□ 1.32
SNRNP70-204ENST00000595231 DOCK4Q8N1I0 1966 aa23.27■■□□□ 1.32
SNRNP70-204ENST00000595231 SPOPO43791 374 aa23.27■■□□□ 1.32
SNRNP70-204ENST00000595231 TBL1XO60907 577 aa23.27■■□□□ 1.32
SNRNP70-204ENST00000595231 LRIG2O94898 1065 aa23.27■■□□□ 1.32
SNRNP70-204ENST00000595231 ZXDAP98168 799 aa23.27■■□□□ 1.32
SNRNP70-204ENST00000595231 DPYSL2Q16555 572 aa23.27■■□□□ 1.32
SNRNP70-204ENST00000595231 LRRC38Q5VT99 294 aa23.27■■□□□ 1.32
SNRNP70-204ENST00000595231 LRRC31Q6UY01 552 aa23.27■■□□□ 1.32
SNRNP70-204ENST00000595231 ETFBKMTQ8IXQ9 262 aa23.27■■□□□ 1.32
SNRNP70-204ENST00000595231 NAT16Q8N8M0 369 aa23.27■■□□□ 1.32
SNRNP70-204ENST00000595231 HJURPQ8NCD3 748 aaPredicted RBP23.27■■□□□ 1.32
SNRNP70-204ENST00000595231 HSPH1Q92598 858 aa23.27■■□□□ 1.32
SNRNP70-204ENST00000595231 KCTD15Q96SI1 283 aaPredicted RBP23.27■■□□□ 1.32
SNRNP70-204ENST00000595231 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.27■■□□□ 1.32
SNRNP70-204ENST00000595231 FBXO10Q9UK96 956 aa23.27■■□□□ 1.32
SNRNP70-204ENST00000595231 PIAS3Q9Y6X2 628 aa23.27■■□□□ 1.32
SNRNP70-204ENST00000595231 USP27XA6NNY8 438 aa23.26■■□□□ 1.31
SNRNP70-204ENST00000595231 SPECC1L-ADORA2AF8WAN1 911 aa23.26■■□□□ 1.31
SNRNP70-204ENST00000595231 CACNG3O60359 315 aa23.26■■□□□ 1.31
SNRNP70-204ENST00000595231 KRT7P08729 469 aa23.26■■□□□ 1.31
SNRNP70-204ENST00000595231 GLULP15104 373 aa23.26■■□□□ 1.31
SNRNP70-204ENST00000595231 CTHP32929 405 aa23.26■■□□□ 1.31
SNRNP70-204ENST00000595231 OPRD1P41143 372 aa23.26■■□□□ 1.31
SNRNP70-204ENST00000595231 ARSEP51690 589 aa23.26■■□□□ 1.31
SNRNP70-204ENST00000595231 RABGAP1LQ5R372 815 aa23.26■■□□□ 1.31
SNRNP70-204ENST00000595231 NAIF1Q69YI7 327 aaPredicted RBP23.26■■□□□ 1.31
SNRNP70-204ENST00000595231 TXNDC11Q6PKC3 985 aa23.26■■□□□ 1.31
SNRNP70-204ENST00000595231 CIR1Q86X95 450 aaPredicted RBP23.26■■□□□ 1.31
SNRNP70-204ENST00000595231 C8orf33Q9H7E9 229 aaPredicted RBP23.26■■□□□ 1.31
SNRNP70-204ENST00000595231 PPARGC1AQ9UBK2 798 aaKnown RBP23.26■■□□□ 1.31
SNRNP70-204ENST00000595231 F5P12259 2224 aa23.26■■□□□ 1.31
SNRNP70-204ENST00000595231 CNTN5O94779 1100 aa23.25■■□□□ 1.31
SNRNP70-204ENST00000595231 GJC1P36383 396 aa23.25■■□□□ 1.31
SNRNP70-204ENST00000595231 ALFQ53S48 1182 aa23.25■■□□□ 1.31
SNRNP70-204ENST00000595231 NT5DC3Q86UY8 548 aa23.25■■□□□ 1.31
SNRNP70-204ENST00000595231 RALGPS2Q86X27 583 aaPredicted RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms