RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 ADAM23O75077 832 aa15.07■□□□□ 0
VRK3-206ENST00000594090 PAGE1O75459 146 aa15.07■□□□□ 0
VRK3-206ENST00000594090 SERPING1P05155 500 aa15.07■□□□□ 0
VRK3-206ENST00000594090 GZMAP12544 262 aa15.07■□□□□ 0
VRK3-206ENST00000594090 PDGFRAP16234 1089 aa15.07■□□□□ 0
VRK3-206ENST00000594090 SDC4P31431 198 aa15.07■□□□□ 0
VRK3-206ENST00000594090 RDXP35241 583 aaKnown RBP15.07■□□□□ 0
VRK3-206ENST00000594090 PTPN9P43378 593 aa15.07■□□□□ 0
VRK3-206ENST00000594090 FNTBP49356 437 aa15.07■□□□□ 0
VRK3-206ENST00000594090 ATP11AP98196 1134 aa15.07■□□□□ 0
VRK3-206ENST00000594090 CRY1Q16526 586 aa15.07■□□□□ 0
VRK3-206ENST00000594090 EOGTQ5NDL2 527 aa15.07■□□□□ 0
VRK3-206ENST00000594090 HEATR6Q6AI08 1181 aaKnown RBP15.07■□□□□ 0
VRK3-206ENST00000594090 SARM1Q6SZW1 724 aa15.07■□□□□ 0
VRK3-206ENST00000594090 VSTM4Q8IW00 320 aa15.07■□□□□ 0
VRK3-206ENST00000594090 MFN1Q8IWA4 741 aa15.07■□□□□ 0
VRK3-206ENST00000594090 CFAP52Q8N1V2 620 aa15.07■□□□□ 0
VRK3-206ENST00000594090 CAMKK1Q8N5S9 505 aa15.07■□□□□ 0
VRK3-206ENST00000594090 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.07■□□□□ 0
VRK3-206ENST00000594090 ZNF557Q8N988 423 aaPredicted RBP15.07■□□□□ 0
VRK3-206ENST00000594090 VCPIP1Q96JH7 1222 aa15.07■□□□□ 0
VRK3-206ENST00000594090 WDCPQ9H6R7 721 aa15.07■□□□□ 0
VRK3-206ENST00000594090 ABCB8Q9NUT2 735 aa15.07■□□□□ 0
VRK3-206ENST00000594090 VPS13AQ96RL7 3174 aa15.06■□□□□ 0
VRK3-206ENST00000594090 SIGLEC16A6NMB1 481 aa15.06■□□□□ 0
VRK3-206ENST00000594090 MUC22E2RYF6 1773 aaPredicted RBP15.06■□□□□ 0
VRK3-206ENST00000594090 I6L893 689 aaPredicted RBP15.06■□□□□ 0
VRK3-206ENST00000594090 LILRB5O75023 590 aa15.06■□□□□ 0
VRK3-206ENST00000594090 ENDOD1O94919 500 aa15.06■□□□□ 0
VRK3-206ENST00000594090 LUC7L3O95232 432 aaKnown RBP15.06■□□□□ 0
VRK3-206ENST00000594090 APBB3O95704 486 aa15.06■□□□□ 0
VRK3-206ENST00000594090 RRM1P23921 792 aa15.06■□□□□ 0
VRK3-206ENST00000594090 RFC1P35251 1148 aaPredicted RBP15.06■□□□□ 0
VRK3-206ENST00000594090 GGCXP38435 758 aa15.06■□□□□ 0
VRK3-206ENST00000594090 PXNP49023 591 aaPredicted RBP15.06■□□□□ 0
VRK3-206ENST00000594090 EIF4HQ15056 248 aaKnown RBP15.06■□□□□ 0
VRK3-206ENST00000594090 CDO1Q16878 200 aa15.06■□□□□ 0
VRK3-206ENST00000594090 C15orf59Q2T9L4 293 aaPredicted RBP15.06■□□□□ 0
VRK3-206ENST00000594090 CCDC14Q49A88 953 aa15.06■□□□□ 0
VRK3-206ENST00000594090 PPP1R15BQ5SWA1 713 aa15.06■□□□□ 0
VRK3-206ENST00000594090 TTC39BQ5VTQ0 682 aaPredicted RBP15.06■□□□□ 0
VRK3-206ENST00000594090 TMEM215Q68D42 235 aa15.06■□□□□ 0
VRK3-206ENST00000594090 TMEM92Q6UXU6 159 aa15.06■□□□□ 0
VRK3-206ENST00000594090 KIAA0907Q7Z7F0 614 aaPredicted RBP15.06■□□□□ 0
VRK3-206ENST00000594090 LONP2Q86WA8 852 aa15.06■□□□□ 0
VRK3-206ENST00000594090 FAM131BQ86XD5 332 aa15.06■□□□□ 0
VRK3-206ENST00000594090 AHI1Q8N157 1196 aa15.06■□□□□ 0
VRK3-206ENST00000594090 WFIKKN2Q8TEU8 576 aa15.06■□□□□ 0
VRK3-206ENST00000594090 ATRIPQ8WXE1 791 aa15.06■□□□□ 0
VRK3-206ENST00000594090 MCEEQ96PE7 176 aa15.06■□□□□ 0
VRK3-206ENST00000594090 GGA2Q9UJY4 613 aa15.06■□□□□ 0
VRK3-206ENST00000594090 MYO15AQ9UKN7 3530 aa15.06■□□□□ 0
VRK3-206ENST00000594090 HS3ST4Q9Y661 456 aa15.06■□□□□ 0
VRK3-206ENST00000594090 AP5Z1O43299 807 aa15.05■□□□□ -0
VRK3-206ENST00000594090 ATMINO43313 823 aaPredicted RBP15.05■□□□□ -0
VRK3-206ENST00000594090 RTN2O75298 545 aa15.05■□□□□ -0
VRK3-206ENST00000594090 PLEKP08567 350 aaPredicted RBP15.05■□□□□ -0
VRK3-206ENST00000594090 PABPC1P11940 636 aaKnown RBP15.05■□□□□ -0
VRK3-206ENST00000594090 HNRNPLP14866 589 aaKnown RBP eCLIP15.05■□□□□ -0
VRK3-206ENST00000594090 GPD1P21695 349 aa15.05■□□□□ -0
VRK3-206ENST00000594090 NTSR1P30989 418 aa15.05■□□□□ -0
VRK3-206ENST00000594090 CD70P32970 193 aa15.05■□□□□ -0
VRK3-206ENST00000594090 DGKEP52429 567 aa15.05■□□□□ -0
VRK3-206ENST00000594090 CDH18Q13634 790 aa15.05■□□□□ -0
VRK3-206ENST00000594090 AUHQ13825 339 aaKnown RBP15.05■□□□□ -0
VRK3-206ENST00000594090 RAB6CQ53S08 254 aa15.05■□□□□ -0
VRK3-206ENST00000594090 RABGAP1LQ5R372 815 aa15.05■□□□□ -0
VRK3-206ENST00000594090 SH3PXD2AQ5TCZ1 1133 aa15.05■□□□□ -0
VRK3-206ENST00000594090 FBXL22Q6P050 247 aa15.05■□□□□ -0
VRK3-206ENST00000594090 WDR59Q6PJI9 974 aa15.05■□□□□ -0
VRK3-206ENST00000594090 CHST9Q7L1S5 443 aa15.05■□□□□ -0
VRK3-206ENST00000594090 STRADAQ7RTN6 431 aa15.05■□□□□ -0
VRK3-206ENST00000594090 WDR5BQ86VZ2 330 aa15.05■□□□□ -0
VRK3-206ENST00000594090 DNAAF5Q86Y56 855 aa15.05■□□□□ -0
VRK3-206ENST00000594090 CHPFQ8IZ52 775 aa15.05■□□□□ -0
VRK3-206ENST00000594090 CARNMT1Q8N4J0 409 aa15.05■□□□□ -0
VRK3-206ENST00000594090 TSTD1Q8NFU3 115 aa15.05■□□□□ -0
VRK3-206ENST00000594090 FIBINQ8TAL6 211 aa15.05■□□□□ -0
VRK3-206ENST00000594090 UCMAQ8WVF2 138 aa15.05■□□□□ -0
VRK3-206ENST00000594090 LMLNQ96KR4 655 aa15.05■□□□□ -0
VRK3-206ENST00000594090 RPRD1AQ96P16 312 aaPredicted RBP15.05■□□□□ -0
VRK3-206ENST00000594090 ACOX2Q99424 681 aa15.05■□□□□ -0
VRK3-206ENST00000594090 CIPCQ9C0C6 399 aa15.05■□□□□ -0
VRK3-206ENST00000594090 RAB6CQ9H0N0 254 aa15.05■□□□□ -0
VRK3-206ENST00000594090 RBSNQ9H1K0 784 aa15.05■□□□□ -0
VRK3-206ENST00000594090 ELOVL2Q9NXB9 296 aa15.05■□□□□ -0
VRK3-206ENST00000594090 CACNA2D2Q9NY47 1150 aa15.05■□□□□ -0
VRK3-206ENST00000594090 VANGL2Q9ULK5 521 aa15.05■□□□□ -0
VRK3-206ENST00000594090 CACNA1HO95180 2353 aa15.04■□□□□ -0
VRK3-206ENST00000594090 CCDC163A0A0D9SF12 145 aa15.04■□□□□ -0
VRK3-206ENST00000594090 A0A1B0GVM2 712 aa15.04■□□□□ -0
VRK3-206ENST00000594090 TCAF2A6NFQ2 919 aa15.04■□□□□ -0
VRK3-206ENST00000594090 FTLP02792 175 aaPredicted RBP15.04■□□□□ -0
VRK3-206ENST00000594090 HOXB2P14652 356 aa15.04■□□□□ -0
VRK3-206ENST00000594090 HNRNPH3P31942 346 aaKnown RBP15.04■□□□□ -0
VRK3-206ENST00000594090 WASP42768 502 aa15.04■□□□□ -0
VRK3-206ENST00000594090 RPL7AP62424 266 aaKnown RBP15.04■□□□□ -0
VRK3-206ENST00000594090 LMAN2Q12907 356 aa15.04■□□□□ -0
VRK3-206ENST00000594090 ADIPOR2Q86V24 386 aa15.04■□□□□ -0
VRK3-206ENST00000594090 VPS36Q86VN1 386 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms