RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 SH3BP5O60239 455 aa18.64■□□□□ 0.57
PRKCSH-211ENST00000590098 AFPP02771 609 aaKnown RBP18.64■□□□□ 0.57
PRKCSH-211ENST00000590098 BMP6P22004 513 aa18.64■□□□□ 0.57
PRKCSH-211ENST00000590098 STX17P56962 302 aa18.64■□□□□ 0.57
PRKCSH-211ENST00000590098 ZBTB16Q05516 673 aa18.64■□□□□ 0.57
PRKCSH-211ENST00000590098 PAK1Q13153 545 aa18.64■□□□□ 0.57
PRKCSH-211ENST00000590098 MORC3Q14149 939 aa18.64■□□□□ 0.57
PRKCSH-211ENST00000590098 ZNF423Q2M1K9 1284 aa18.64■□□□□ 0.57
PRKCSH-211ENST00000590098 FAM133BQ5BKY9 247 aaKnown RBP18.64■□□□□ 0.57
PRKCSH-211ENST00000590098 NAXDQ8IW45 347 aa18.64■□□□□ 0.57
PRKCSH-211ENST00000590098 MFN1Q8IWA4 741 aa18.64■□□□□ 0.57
PRKCSH-211ENST00000590098 CCDC117Q8IWD4 279 aaPredicted RBP18.64■□□□□ 0.57
PRKCSH-211ENST00000590098 TRIM59Q8IWR1 403 aa18.64■□□□□ 0.57
PRKCSH-211ENST00000590098 SCUBE3Q8IX30 993 aa18.64■□□□□ 0.57
PRKCSH-211ENST00000590098 KDF1Q8NAX2 398 aaPredicted RBP18.64■□□□□ 0.57
PRKCSH-211ENST00000590098 HJURPQ8NCD3 748 aaPredicted RBP18.64■□□□□ 0.57
PRKCSH-211ENST00000590098 SNX19Q92543 992 aa18.64■□□□□ 0.57
PRKCSH-211ENST00000590098 FAM149B1Q96BN6 582 aa18.64■□□□□ 0.57
PRKCSH-211ENST00000590098 SERPINB11Q96P15 392 aa18.64■□□□□ 0.57
PRKCSH-211ENST00000590098 SUN2Q9UH99 717 aa18.64■□□□□ 0.57
PRKCSH-211ENST00000590098 EIF2B4Q9UI10 523 aaKnown RBP18.64■□□□□ 0.57
PRKCSH-211ENST00000590098 ZMIZ1Q9ULJ6 1067 aa18.64■□□□□ 0.57
PRKCSH-211ENST00000590098 KNL1Q8NG31 2342 aa18.64■□□□□ 0.57
PRKCSH-211ENST00000590098 MUC22E2RYF6 1773 aaPredicted RBP18.63■□□□□ 0.57
PRKCSH-211ENST00000590098 GJB3O75712 270 aa18.63■□□□□ 0.57
PRKCSH-211ENST00000590098 FGFR1OPO95684 399 aaKnown RBP18.63■□□□□ 0.57
PRKCSH-211ENST00000590098 CER1O95813 267 aa18.63■□□□□ 0.57
PRKCSH-211ENST00000590098 DNTTP04053 509 aa18.63■□□□□ 0.57
PRKCSH-211ENST00000590098 SLC6A4P31645 630 aa18.63■□□□□ 0.57
PRKCSH-211ENST00000590098 CD70P32970 193 aa18.63■□□□□ 0.57
PRKCSH-211ENST00000590098 ACADSBP45954 432 aa18.63■□□□□ 0.57
PRKCSH-211ENST00000590098 TRIP6Q15654 476 aaKnown RBP18.63■□□□□ 0.57
PRKCSH-211ENST00000590098 PTPRNQ16849 979 aa18.63■□□□□ 0.57
PRKCSH-211ENST00000590098 IL27RAQ6UWB1 636 aa18.63■□□□□ 0.57
PRKCSH-211ENST00000590098 DQX1Q8TE96 717 aaKnown RBP18.63■□□□□ 0.57
PRKCSH-211ENST00000590098 GATA6Q92908 595 aa18.63■□□□□ 0.57
PRKCSH-211ENST00000590098 KREMEN1Q96MU8 473 aa18.63■□□□□ 0.57
PRKCSH-211ENST00000590098 CAMK1GQ96NX5 476 aa18.63■□□□□ 0.57
PRKCSH-211ENST00000590098 TRIM62Q9BVG3 475 aa18.63■□□□□ 0.57
PRKCSH-211ENST00000590098 SRRTQ9BXP5 876 aaKnown RBP18.63■□□□□ 0.57
PRKCSH-211ENST00000590098 INTS2Q9H0H0 1204 aaKnown RBP18.63■□□□□ 0.57
PRKCSH-211ENST00000590098 PRSS16Q9NQE7 514 aa18.63■□□□□ 0.57
PRKCSH-211ENST00000590098 TLR6Q9Y2C9 796 aa18.63■□□□□ 0.57
PRKCSH-211ENST00000590098 CAPN9O14815 690 aa18.62■□□□□ 0.57
PRKCSH-211ENST00000590098 MED7O43513 233 aa18.62■□□□□ 0.57
PRKCSH-211ENST00000590098 MATKP42679 507 aa18.62■□□□□ 0.57
PRKCSH-211ENST00000590098 GPD2P43304 727 aa18.62■□□□□ 0.57
PRKCSH-211ENST00000590098 MARSP56192 900 aaKnown RBP18.62■□□□□ 0.57
PRKCSH-211ENST00000590098 ST8SIA6P61647 398 aa18.62■□□□□ 0.57
PRKCSH-211ENST00000590098 RPS14P62263 151 aaKnown RBP18.62■□□□□ 0.57
PRKCSH-211ENST00000590098 TTC31Q49AM3 519 aaPredicted RBP18.62■□□□□ 0.57
PRKCSH-211ENST00000590098 CARNMT1Q8N4J0 409 aa18.62■□□□□ 0.57
PRKCSH-211ENST00000590098 FIBINQ8TAL6 211 aa18.62■□□□□ 0.57
PRKCSH-211ENST00000590098 WFDC5Q8TCV5 224 aa18.62■□□□□ 0.57
PRKCSH-211ENST00000590098 BTBD1Q9H0C5 482 aa18.62■□□□□ 0.57
PRKCSH-211ENST00000590098 GAREM1Q9H706 876 aa18.62■□□□□ 0.57
PRKCSH-211ENST00000590098 UBE2TQ9NPD8 197 aaPredicted RBP18.62■□□□□ 0.57
PRKCSH-211ENST00000590098 CNTN6Q9UQ52 1028 aa18.62■□□□□ 0.57
PRKCSH-211ENST00000590098 NAALADL1Q9UQQ1 740 aa18.62■□□□□ 0.57
PRKCSH-211ENST00000590098 MSRB2Q9Y3D2 182 aa18.62■□□□□ 0.57
PRKCSH-211ENST00000590098 LETM1O95202 739 aaPredicted RBP18.61■□□□□ 0.57
PRKCSH-211ENST00000590098 FYNP06241 537 aa18.61■□□□□ 0.57
PRKCSH-211ENST00000590098 ACSL1P33121 698 aa18.61■□□□□ 0.57
PRKCSH-211ENST00000590098 RPL34P49207 117 aaKnown RBP18.61■□□□□ 0.57
PRKCSH-211ENST00000590098 AFF3P51826 1226 aaKnown RBP18.61■□□□□ 0.57
PRKCSH-211ENST00000590098 NNTQ13423 1086 aa18.61■□□□□ 0.57
PRKCSH-211ENST00000590098 ZNF776Q68DI1 518 aaPredicted RBP18.61■□□□□ 0.57
PRKCSH-211ENST00000590098 NADSYN1Q6IA69 706 aa18.61■□□□□ 0.57
PRKCSH-211ENST00000590098 DENND1BQ6P3S1 775 aa18.61■□□□□ 0.57
PRKCSH-211ENST00000590098 CHCHD4Q8N4Q1 142 aa18.61■□□□□ 0.57
PRKCSH-211ENST00000590098 ADAM32Q8TC27 787 aa18.61■□□□□ 0.57
PRKCSH-211ENST00000590098 SETD7Q8WTS6 366 aaKnown RBP18.61■□□□□ 0.57
PRKCSH-211ENST00000590098 STK32AQ8WU08 396 aa18.61■□□□□ 0.57
PRKCSH-211ENST00000590098 FCRL2Q96LA5 508 aaPredicted RBP18.61■□□□□ 0.57
PRKCSH-211ENST00000590098 C6orf106Q9H6K1 298 aaPredicted RBP18.61■□□□□ 0.57
PRKCSH-211ENST00000590098 KLK13Q9UKR3 277 aa18.61■□□□□ 0.57
PRKCSH-211ENST00000590098 WDFY3Q8IZQ1 3526 aa18.61■□□□□ 0.57
PRKCSH-211ENST00000590098 FAM208BQ5VWN6 2430 aa18.6■□□□□ 0.57
PRKCSH-211ENST00000590098 SEMA4FO95754 770 aa18.6■□□□□ 0.57
PRKCSH-211ENST00000590098 MOCS2O96007 188 aaPredicted RBP18.6■□□□□ 0.57
PRKCSH-211ENST00000590098 APOEP02649 317 aa18.6■□□□□ 0.57
PRKCSH-211ENST00000590098 ASLP04424 464 aa18.6■□□□□ 0.57
PRKCSH-211ENST00000590098 C7P10643 843 aa18.6■□□□□ 0.57
PRKCSH-211ENST00000590098 RPS24P62847 133 aaKnown RBP18.6■□□□□ 0.57
PRKCSH-211ENST00000590098 CDH18Q13634 790 aa18.6■□□□□ 0.57
PRKCSH-211ENST00000590098 TEAD4Q15561 434 aa18.6■□□□□ 0.57
PRKCSH-211ENST00000590098 MEA1Q16626 185 aa18.6■□□□□ 0.57
PRKCSH-211ENST00000590098 BEND5Q7L4P6 421 aa18.6■□□□□ 0.57
PRKCSH-211ENST00000590098 ENOSF1Q7L5Y1 443 aa18.6■□□□□ 0.57
PRKCSH-211ENST00000590098 GANCQ8TET4 914 aa18.6■□□□□ 0.57
PRKCSH-211ENST00000590098 TTC17Q96AE7 1141 aa18.6■□□□□ 0.57
PRKCSH-211ENST00000590098 PRICKLE1Q96MT3 831 aaPredicted RBP18.6■□□□□ 0.57
PRKCSH-211ENST00000590098 IL21RQ9HBE5 538 aa18.6■□□□□ 0.57
PRKCSH-211ENST00000590098 NCKAP1Q9Y2A7 1128 aa18.6■□□□□ 0.57
PRKCSH-211ENST00000590098 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.6■□□□□ 0.57
PRKCSH-211ENST00000590098 CABIN1Q9Y6J0 2220 aa18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 A0A1B0GVT2 93 aa18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 THAP12O43422 761 aa18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 RNASEH1O60930 286 aaKnown RBP18.59■□□□□ 0.57
PRKCSH-211ENST00000590098 GADD45BO75293 160 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms