RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 RSPH9Q9H1X1 276 aaPredicted RBP22.7■■□□□ 1.22
CAPNS1-205ENST00000588780 NEUROG2Q9H2A3 272 aa22.7■■□□□ 1.22
CAPNS1-205ENST00000588780 SERGEFQ9UGK8 458 aa22.7■■□□□ 1.22
CAPNS1-205ENST00000588780 ADAMTS1Q9UHI8 967 aa22.7■■□□□ 1.22
CAPNS1-205ENST00000588780 TLR4O00206 839 aa22.69■■□□□ 1.22
CAPNS1-205ENST00000588780 MID1O15344 667 aa22.69■■□□□ 1.22
CAPNS1-205ENST00000588780 HLA-DRAP01903 254 aa22.69■■□□□ 1.22
CAPNS1-205ENST00000588780 PDCP20941 246 aa22.69■■□□□ 1.22
CAPNS1-205ENST00000588780 ZNF445P59923 1031 aa22.69■■□□□ 1.22
CAPNS1-205ENST00000588780 CLDN10P78369 228 aa22.69■■□□□ 1.22
CAPNS1-205ENST00000588780 INSM1Q01101 510 aaPredicted RBP22.69■■□□□ 1.22
CAPNS1-205ENST00000588780 INCA1Q0VD86 236 aa22.69■■□□□ 1.22
CAPNS1-205ENST00000588780 SLC39A14Q15043 492 aa22.69■■□□□ 1.22
CAPNS1-205ENST00000588780 ZNF394Q53GI3 561 aa22.69■■□□□ 1.22
CAPNS1-205ENST00000588780 UNC13DQ70J99 1090 aa22.69■■□□□ 1.22
CAPNS1-205ENST00000588780 SV2AQ7L0J3 742 aa22.69■■□□□ 1.22
CAPNS1-205ENST00000588780 DHX40Q8IX18 779 aaKnown RBP22.69■■□□□ 1.22
CAPNS1-205ENST00000588780 FAM217AQ8IXS0 508 aa22.69■■□□□ 1.22
CAPNS1-205ENST00000588780 OXR1Q8N573 874 aa22.69■■□□□ 1.22
CAPNS1-205ENST00000588780 RNF139Q8WU17 664 aa22.69■■□□□ 1.22
CAPNS1-205ENST00000588780 BLZF1Q9H2G9 400 aa22.69■■□□□ 1.22
CAPNS1-205ENST00000588780 EBF2Q9HAK2 575 aa22.69■■□□□ 1.22
CAPNS1-205ENST00000588780 B8ZZF3 427 aa22.68■■□□□ 1.22
CAPNS1-205ENST00000588780 MT-CO3P00414 261 aa22.68■■□□□ 1.22
CAPNS1-205ENST00000588780 SLC8A3P57103 927 aa22.68■■□□□ 1.22
CAPNS1-205ENST00000588780 DAB2P98082 770 aa22.68■■□□□ 1.22
CAPNS1-205ENST00000588780 STK38Q15208 465 aa22.68■■□□□ 1.22
CAPNS1-205ENST00000588780 CST6Q15828 149 aa22.68■■□□□ 1.22
CAPNS1-205ENST00000588780 KMT5BQ4FZB7 885 aa22.68■■□□□ 1.22
CAPNS1-205ENST00000588780 HS1BP3Q53T59 392 aa22.68■■□□□ 1.22
CAPNS1-205ENST00000588780 MMAAQ8IVH4 418 aaKnown RBP22.68■■□□□ 1.22
CAPNS1-205ENST00000588780 DCBLD1Q8N8Z6 715 aa22.68■■□□□ 1.22
CAPNS1-205ENST00000588780 IQUBQ8NA54 791 aa22.68■■□□□ 1.22
CAPNS1-205ENST00000588780 WBP1Q96G27 269 aa22.68■■□□□ 1.22
CAPNS1-205ENST00000588780 USP28Q96RU2 1077 aa22.68■■□□□ 1.22
CAPNS1-205ENST00000588780 CYP3A43Q9HB55 503 aa22.68■■□□□ 1.22
CAPNS1-205ENST00000588780 PPP4R2Q9NY27 417 aa22.68■■□□□ 1.22
CAPNS1-205ENST00000588780 WNT9AO14904 365 aa22.67■■□□□ 1.22
CAPNS1-205ENST00000588780 SLC28A2O43868 658 aa22.67■■□□□ 1.22
CAPNS1-205ENST00000588780 SIN3BO75182 1162 aa22.67■■□□□ 1.22
CAPNS1-205ENST00000588780 CASP1P29466 404 aa22.67■■□□□ 1.22
CAPNS1-205ENST00000588780 CD70P32970 193 aa22.67■■□□□ 1.22
CAPNS1-205ENST00000588780 NXPH1P58417 271 aa22.67■■□□□ 1.22
CAPNS1-205ENST00000588780 E2F1Q01094 437 aa22.67■■□□□ 1.22
CAPNS1-205ENST00000588780 EHHADHQ08426 723 aa22.67■■□□□ 1.22
CAPNS1-205ENST00000588780 TRIP4Q15650 581 aaPredicted RBP22.67■■□□□ 1.22
CAPNS1-205ENST00000588780 ADGRF1Q5T601 910 aa22.67■■□□□ 1.22
CAPNS1-205ENST00000588780 ZC3H3Q8IXZ2 948 aaKnown RBP22.67■■□□□ 1.22
CAPNS1-205ENST00000588780 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.67■■□□□ 1.22
CAPNS1-205ENST00000588780 OR14C36Q8NHC7 312 aa22.67■■□□□ 1.22
CAPNS1-205ENST00000588780 C7orf25Q9BPX7 421 aa22.67■■□□□ 1.22
CAPNS1-205ENST00000588780 SEMA4CQ9C0C4 833 aa22.67■■□□□ 1.22
CAPNS1-205ENST00000588780 OLA1Q9NTK5 396 aaKnown RBP22.67■■□□□ 1.22
CAPNS1-205ENST00000588780 STIM2Q9P246 746 aa22.67■■□□□ 1.22
CAPNS1-205ENST00000588780 SPTA1P02549 2419 aa22.67■■□□□ 1.22
CAPNS1-205ENST00000588780 MGAQ8IWI9 3026 aa22.66■■□□□ 1.22
CAPNS1-205ENST00000588780 A0A1W2PR77 199 aa22.66■■□□□ 1.22
CAPNS1-205ENST00000588780 TBL1XO60907 577 aa22.66■■□□□ 1.22
CAPNS1-205ENST00000588780 SDC3O75056 442 aa22.66■■□□□ 1.22
CAPNS1-205ENST00000588780 MPOP05164 745 aa22.66■■□□□ 1.22
CAPNS1-205ENST00000588780 C7P10643 843 aa22.66■■□□□ 1.22
CAPNS1-205ENST00000588780 C6P13671 934 aa22.66■■□□□ 1.22
CAPNS1-205ENST00000588780 TKTL1P51854 596 aa22.66■■□□□ 1.22
CAPNS1-205ENST00000588780 KCNJ12Q14500 433 aa22.66■■□□□ 1.22
CAPNS1-205ENST00000588780 E2F4Q16254 413 aa22.66■■□□□ 1.22
CAPNS1-205ENST00000588780 CEP135Q66GS9 1140 aa22.66■■□□□ 1.22
CAPNS1-205ENST00000588780 PIGZQ86VD9 579 aa22.66■■□□□ 1.22
CAPNS1-205ENST00000588780 CACTIN-AS1Q8N1I8 211 aa22.66■■□□□ 1.22
CAPNS1-205ENST00000588780 CCDC150Q8NCX0 1101 aa22.66■■□□□ 1.22
CAPNS1-205ENST00000588780 KCNE4Q8WWG9 221 aa22.66■■□□□ 1.22
CAPNS1-205ENST00000588780 ZNF578Q96N58 590 aaPredicted RBP22.66■■□□□ 1.22
CAPNS1-205ENST00000588780 SFMBT1Q9UHJ3 866 aa22.66■■□□□ 1.22
CAPNS1-205ENST00000588780 PCDHB1Q9Y5F3 818 aa22.66■■□□□ 1.22
CAPNS1-205ENST00000588780 TBC1D3DA0A087WVF3 549 aa22.65■■□□□ 1.22
CAPNS1-205ENST00000588780 TBC1D3IA0A087WXS9 549 aa22.65■■□□□ 1.22
CAPNS1-205ENST00000588780 TBC1D3EA0A087X179 549 aa22.65■■□□□ 1.22
CAPNS1-205ENST00000588780 TBC1D3KA0A087X1G2 549 aa22.65■■□□□ 1.22
CAPNS1-205ENST00000588780 TBC1D3FA6NER0 549 aaPredicted RBP22.65■■□□□ 1.22
CAPNS1-205ENST00000588780 TBC1D3LB9A6J9 549 aa22.65■■□□□ 1.22
CAPNS1-205ENST00000588780 KLK10O43240 276 aa22.65■■□□□ 1.22
CAPNS1-205ENST00000588780 ZBED1O96006 694 aa22.65■■□□□ 1.22
CAPNS1-205ENST00000588780 SLFN14P0C7P3 912 aa22.65■■□□□ 1.22
CAPNS1-205ENST00000588780 TBC1D3HP0C7X1 549 aa22.65■■□□□ 1.22
CAPNS1-205ENST00000588780 SLC8A1P32418 973 aa22.65■■□□□ 1.22
CAPNS1-205ENST00000588780 PSMD8P48556 350 aa22.65■■□□□ 1.22
CAPNS1-205ENST00000588780 CCR5P51681 352 aa22.65■■□□□ 1.22
CAPNS1-205ENST00000588780 TBC1D3GQ6DHY5 549 aa22.65■■□□□ 1.22
CAPNS1-205ENST00000588780 TBC1D3CQ6IPX1 549 aa22.65■■□□□ 1.22
CAPNS1-205ENST00000588780 TBC1D3Q8IZP1 549 aaPredicted RBP22.65■■□□□ 1.22
CAPNS1-205ENST00000588780 RFFLQ8WZ73 363 aa22.65■■□□□ 1.22
CAPNS1-205ENST00000588780 NDRG1Q92597 394 aaKnown RBP22.65■■□□□ 1.22
CAPNS1-205ENST00000588780 NIF3L1Q9GZT8 377 aa22.65■■□□□ 1.22
CAPNS1-205ENST00000588780 FZD4Q9ULV1 537 aa22.65■■□□□ 1.22
CAPNS1-205ENST00000588780 HBS1LQ9Y450 684 aaKnown RBP22.65■■□□□ 1.22
CAPNS1-205ENST00000588780 CEP83Q9Y592 693 aa22.65■■□□□ 1.22
CAPNS1-205ENST00000588780 ACP1P24666 158 aa22.64■■□□□ 1.21
CAPNS1-205ENST00000588780 RXRGP48443 463 aa22.64■■□□□ 1.21
CAPNS1-205ENST00000588780 SGSHP51688 502 aa22.64■■□□□ 1.21
CAPNS1-205ENST00000588780 GABREP78334 506 aa22.64■■□□□ 1.21
CAPNS1-205ENST00000588780 HNRNPA1L2Q32P51 320 aaKnown RBP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms