RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.48■□□□□ 0.39
LINC01842-201ENST00000588275 SNX11Q9Y5W9 270 aa17.48■□□□□ 0.39
LINC01842-201ENST00000588275 DSPP15924 2871 aaKnown RBP17.48■□□□□ 0.39
LINC01842-201ENST00000588275 TYW5A2RUC4 315 aaKnown RBP17.47■□□□□ 0.39
LINC01842-201ENST00000588275 FAM47DPA6NHR8 397 aa17.47■□□□□ 0.39
LINC01842-201ENST00000588275 FLRT2O43155 660 aa17.47■□□□□ 0.39
LINC01842-201ENST00000588275 ACSL4O60488 711 aa17.47■□□□□ 0.39
LINC01842-201ENST00000588275 LTFP02788 710 aa17.47■□□□□ 0.39
LINC01842-201ENST00000588275 SLC6A4P31645 630 aa17.47■□□□□ 0.39
LINC01842-201ENST00000588275 FMO5P49326 533 aa17.47■□□□□ 0.39
LINC01842-201ENST00000588275 LRRC63Q05C16 580 aa17.47■□□□□ 0.39
LINC01842-201ENST00000588275 COL9A2Q14055 689 aaPredicted RBP17.47■□□□□ 0.39
LINC01842-201ENST00000588275 CCDC40Q4G0X9 1142 aa17.47■□□□□ 0.39
LINC01842-201ENST00000588275 PKDCCQ504Y2 493 aa17.47■□□□□ 0.39
LINC01842-201ENST00000588275 CCDC157Q569K6 752 aa17.47■□□□□ 0.39
LINC01842-201ENST00000588275 PIK3R6Q5UE93 754 aa17.47■□□□□ 0.39
LINC01842-201ENST00000588275 NUGGCQ68CJ6 796 aa17.47■□□□□ 0.39
LINC01842-201ENST00000588275 ZNF776Q68DI1 518 aaPredicted RBP17.47■□□□□ 0.39
LINC01842-201ENST00000588275 ISM2Q6H9L7 571 aa17.47■□□□□ 0.39
LINC01842-201ENST00000588275 MSANTD2Q6P1R3 559 aa17.47■□□□□ 0.39
LINC01842-201ENST00000588275 C19orf48Q6RUI8 117 aa17.47■□□□□ 0.39
LINC01842-201ENST00000588275 LCLAT1Q6UWP7 414 aa17.47■□□□□ 0.39
LINC01842-201ENST00000588275 UNC45BQ8IWX7 931 aa17.47■□□□□ 0.39
LINC01842-201ENST00000588275 FMR1NBQ8N0W7 255 aaPredicted RBP17.47■□□□□ 0.39
LINC01842-201ENST00000588275 CARNMT1Q8N4J0 409 aa17.47■□□□□ 0.39
LINC01842-201ENST00000588275 KAT5Q92993 513 aa17.47■□□□□ 0.39
LINC01842-201ENST00000588275 BIRC7Q96CA5 298 aa17.47■□□□□ 0.39
LINC01842-201ENST00000588275 GSDMAQ96QA5 445 aa17.47■□□□□ 0.39
LINC01842-201ENST00000588275 MIS12Q9H081 205 aa17.47■□□□□ 0.39
LINC01842-201ENST00000588275 CCDC86Q9H6F5 360 aaKnown RBP17.47■□□□□ 0.39
LINC01842-201ENST00000588275 FBRSQ9HAH7 460 aa17.47■□□□□ 0.39
LINC01842-201ENST00000588275 PLXNB3Q9ULL4 1909 aa17.47■□□□□ 0.39
LINC01842-201ENST00000588275 ANKRD11Q6UB99 2663 aaPredicted RBP17.46■□□□□ 0.39
LINC01842-201ENST00000588275 PTPRBP23467 1997 aa17.46■□□□□ 0.39
LINC01842-201ENST00000588275 FREM2Q5SZK8 3169 aa17.46■□□□□ 0.39
LINC01842-201ENST00000588275 KCNK3O14649 394 aa17.46■□□□□ 0.39
LINC01842-201ENST00000588275 PAEPP09466 180 aa17.46■□□□□ 0.39
LINC01842-201ENST00000588275 ST8SIA6P61647 398 aa17.46■□□□□ 0.39
LINC01842-201ENST00000588275 SUZ12Q15022 739 aaKnown RBP17.46■□□□□ 0.39
LINC01842-201ENST00000588275 FAM133BQ5BKY9 247 aaKnown RBP17.46■□□□□ 0.39
LINC01842-201ENST00000588275 LRSAM1Q6UWE0 723 aa17.46■□□□□ 0.39
LINC01842-201ENST00000588275 CCNI2Q6ZMN8 369 aaPredicted RBP17.46■□□□□ 0.39
LINC01842-201ENST00000588275 KIAA0907Q7Z7F0 614 aaPredicted RBP17.46■□□□□ 0.39
LINC01842-201ENST00000588275 GLRX5Q86SX6 157 aa17.46■□□□□ 0.39
LINC01842-201ENST00000588275 SCML4Q8N228 414 aa17.46■□□□□ 0.39
LINC01842-201ENST00000588275 HJURPQ8NCD3 748 aaPredicted RBP17.46■□□□□ 0.39
LINC01842-201ENST00000588275 MDM1Q8TC05 714 aa17.46■□□□□ 0.39
LINC01842-201ENST00000588275 SLC35F5Q8WV83 523 aa17.46■□□□□ 0.39
LINC01842-201ENST00000588275 IRGQQ8WZA9 623 aa17.46■□□□□ 0.39
LINC01842-201ENST00000588275 SUN2Q9UH99 717 aa17.46■□□□□ 0.39
LINC01842-201ENST00000588275 BTBD3Q9Y2F9 522 aa17.46■□□□□ 0.39
LINC01842-201ENST00000588275 ANKRD6Q9Y2G4 727 aa17.46■□□□□ 0.39
LINC01842-201ENST00000588275 KNL1Q8NG31 2342 aa17.46■□□□□ 0.38
LINC01842-201ENST00000588275 ATRXP46100 2492 aa17.45■□□□□ 0.38
LINC01842-201ENST00000588275 RNF225M0QZC1 329 aaPredicted RBP17.45■□□□□ 0.38
LINC01842-201ENST00000588275 PSMA7O14818 248 aa17.45■□□□□ 0.38
LINC01842-201ENST00000588275 IRAK2O43187 625 aa17.45■□□□□ 0.38
LINC01842-201ENST00000588275 GABBR2O75899 941 aa17.45■□□□□ 0.38
LINC01842-201ENST00000588275 MOCS2O96007 188 aaPredicted RBP17.45■□□□□ 0.38
LINC01842-201ENST00000588275 IGLV3-27P01718 113 aa17.45■□□□□ 0.38
LINC01842-201ENST00000588275 ATXN1LP0C7T5 689 aaKnown RBP17.45■□□□□ 0.38
LINC01842-201ENST00000588275 GRIA4P48058 902 aa17.45■□□□□ 0.38
LINC01842-201ENST00000588275 IL9RQ01113 521 aa17.45■□□□□ 0.38
LINC01842-201ENST00000588275 ZBTB16Q05516 673 aa17.45■□□□□ 0.38
LINC01842-201ENST00000588275 STIM1Q13586 685 aa17.45■□□□□ 0.38
LINC01842-201ENST00000588275 CDH18Q13634 790 aa17.45■□□□□ 0.38
LINC01842-201ENST00000588275 COBLL1Q53SF7 1204 aa17.45■□□□□ 0.38
LINC01842-201ENST00000588275 CCDC117Q8IWD4 279 aaPredicted RBP17.45■□□□□ 0.38
LINC01842-201ENST00000588275 DHX40Q8IX18 779 aaKnown RBP17.45■□□□□ 0.38
LINC01842-201ENST00000588275 ZNF557Q8N988 423 aaPredicted RBP17.45■□□□□ 0.38
LINC01842-201ENST00000588275 BAHD1Q8TBE0 780 aaPredicted RBP17.45■□□□□ 0.38
LINC01842-201ENST00000588275 FAM149B1Q96BN6 582 aa17.45■□□□□ 0.38
LINC01842-201ENST00000588275 PRICKLE1Q96MT3 831 aaPredicted RBP17.45■□□□□ 0.38
LINC01842-201ENST00000588275 CDC6Q99741 560 aa17.45■□□□□ 0.38
LINC01842-201ENST00000588275 DDX50Q9BQ39 737 aaKnown RBP17.45■□□□□ 0.38
LINC01842-201ENST00000588275 ZSWIM1Q9BR11 485 aa17.45■□□□□ 0.38
LINC01842-201ENST00000588275 SGK2Q9HBY8 427 aa17.45■□□□□ 0.38
LINC01842-201ENST00000588275 METTL14Q9HCE5 456 aaKnown RBP17.45■□□□□ 0.38
LINC01842-201ENST00000588275 ST7Q9NRC1 585 aa17.45■□□□□ 0.38
LINC01842-201ENST00000588275 NCKAP1Q9Y2A7 1128 aa17.45■□□□□ 0.38
LINC01842-201ENST00000588275 CEP83Q9Y592 693 aa17.45■□□□□ 0.38
LINC01842-201ENST00000588275 PCDHGB2Q9Y5G2 931 aa17.45■□□□□ 0.38
LINC01842-201ENST00000588275 TP53BP1Q12888 1972 aaPredicted RBP17.44■□□□□ 0.38
LINC01842-201ENST00000588275 SIN3BO75182 1162 aa17.44■□□□□ 0.38
LINC01842-201ENST00000588275 CD27P26842 260 aa17.44■□□□□ 0.38
LINC01842-201ENST00000588275 CSKP41240 450 aa17.44■□□□□ 0.38
LINC01842-201ENST00000588275 CCT8P50990 548 aa17.44■□□□□ 0.38
LINC01842-201ENST00000588275 RPS24P62847 133 aaKnown RBP17.44■□□□□ 0.38
LINC01842-201ENST00000588275 CETN1Q12798 172 aa17.44■□□□□ 0.38
LINC01842-201ENST00000588275 STILQ15468 1287 aa17.44■□□□□ 0.38
LINC01842-201ENST00000588275 CNGA2Q16280 664 aa17.44■□□□□ 0.38
LINC01842-201ENST00000588275 MPP7Q5T2T1 576 aa17.44■□□□□ 0.38
LINC01842-201ENST00000588275 NADSYN1Q6IA69 706 aa17.44■□□□□ 0.38
LINC01842-201ENST00000588275 KLHL10Q6JEL2 608 aa17.44■□□□□ 0.38
LINC01842-201ENST00000588275 RRAGAQ7L523 313 aa17.44■□□□□ 0.38
LINC01842-201ENST00000588275 MARCH9Q86YJ5 346 aa17.44■□□□□ 0.38
LINC01842-201ENST00000588275 ADAM32Q8TC27 787 aa17.44■□□□□ 0.38
LINC01842-201ENST00000588275 DQX1Q8TE96 717 aaKnown RBP17.44■□□□□ 0.38
LINC01842-201ENST00000588275 SERPINB11Q96P15 392 aa17.44■□□□□ 0.38
LINC01842-201ENST00000588275 PABPC3Q9H361 631 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms