RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 OR12D3Q9UGF7 316 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 LCMT1Q9UIC8 334 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 CLEC4EQ9ULY5 219 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 AP4E1Q9UPM8 1137 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 CAPN6Q9Y6Q1 641 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 SHISA7A6NL88 538 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 E9PAM4 449 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 NEDD8-MDP1E9PL57 170 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 F5H5T6 163 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 KRT86O43790 486 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 TBL1XO60907 577 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 SRGAP2O75044 1071 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 PALMO75781 387 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 CNTN5O94779 1100 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 ADH1CP00326 375 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 PENKP01210 267 aaPredicted RBP11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 ADH5P11766 374 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 TNNT1P13805 278 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 TYRP14679 529 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 HOXD9P28356 352 aaPredicted RBP11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 GJC1P36383 396 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 OPRD1P41143 372 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 SLC1A1P43005 524 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 SLC6A11P48066 632 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 AIF1P55008 147 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 ZXDAP98168 799 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 PFKPQ01813 784 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 GAD2Q05329 585 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 NR1H3Q13133 447 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 SEMA3BQ13214 749 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 MTA1Q13330 715 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 HADHQ16836 314 aaKnown RBP11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 C5orf22Q49AR2 442 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 MPPE1Q53F39 396 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 SLC44A4Q53GD3 710 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 EFHC2Q5JST6 749 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 MANEALQ5VSG8 457 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 C11orf63Q6NUN7 778 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 DAAM2Q86T65 1068 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 CIR1Q86X95 450 aaPredicted RBP11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 WFDC5Q8TCV5 224 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 DDI1Q8WTU0 396 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 HSPH1Q92598 858 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 RPRD1AQ96P16 312 aaPredicted RBP11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 KCTD15Q96SI1 283 aaPredicted RBP11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 BBS2Q9BXC9 721 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 IRX2Q9BZI1 471 aaPredicted RBP11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 DHX35Q9H5Z1 703 aaKnown RBP11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 MARK1Q9P0L2 795 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 STIM2Q9P246 746 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 CA14Q9ULX7 337 aa11.06□□□□□ -0.64
SMARCA4-213ENST00000587988 MIA3Q5JRA6 1907 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 VCANP13611 3396 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 IGLV3-10A0A075B6K4 115 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 KRBA1A5PL33 1030 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 DRGXA6NNA5 263 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 SPECC1L-ADORA2AF8WAN1 911 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 TRIM24O15164 1050 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 HOXC11O43248 304 aaPredicted RBP11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 SPOPO43791 374 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 CREB3O43889 395 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 LRIG2O94898 1065 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 CYBBP04839 570 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 CD48P09326 243 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 L1CAMP32004 1257 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 CTHP32929 405 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 ARSEP51690 589 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 NRG1Q02297 640 aaPredicted RBP11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 MESP2Q0VG99 397 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 BOLA3Q53S33 107 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 ALFQ53S48 1182 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 ASTLQ6HA08 431 aaPredicted RBP11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 TXNDC11Q6PKC3 985 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 UBALD2Q8IYN6 164 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 RNF10Q8N5U6 811 aaKnown RBP11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 HJURPQ8NCD3 748 aaPredicted RBP11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 KIAA1524Q8TCG1 905 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 TEKT4Q8WW24 435 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 CD101Q93033 1021 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 CALR3Q96L12 384 aaKnown RBP11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 FBRSL1Q9HCM7 1045 aaKnown RBP11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 KLHL11Q9NVR0 708 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 MPP6Q9NZW5 540 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 WNT16Q9UBV4 365 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 NEU3Q9UQ49 428 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 PIAS3Q9Y6X2 628 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 DOCK4Q8N1I0 1966 aa11.05□□□□□ -0.64
SMARCA4-213ENST00000587988 ZSCAN12O43309 604 aa11.04□□□□□ -0.64
SMARCA4-213ENST00000587988 CACNG3O60359 315 aa11.04□□□□□ -0.64
SMARCA4-213ENST00000587988 TULP3O75386 442 aa11.04□□□□□ -0.64
SMARCA4-213ENST00000587988 FTCDO95954 541 aa11.04□□□□□ -0.64
SMARCA4-213ENST00000587988 GOT1P17174 413 aa11.04□□□□□ -0.64
SMARCA4-213ENST00000587988 CD72P21854 359 aa11.04□□□□□ -0.64
SMARCA4-213ENST00000587988 MARCKSL1P49006 195 aa11.04□□□□□ -0.64
SMARCA4-213ENST00000587988 GALK1P51570 392 aa11.04□□□□□ -0.64
SMARCA4-213ENST00000587988 MLF2Q15773 248 aaPredicted RBP11.04□□□□□ -0.64
SMARCA4-213ENST00000587988 DPYSL2Q16555 572 aa11.04□□□□□ -0.64
SMARCA4-213ENST00000587988 IFI16Q16666 785 aaKnown RBP11.04□□□□□ -0.64
SMARCA4-213ENST00000587988 PPP6R3Q5H9R7 873 aaPredicted RBP11.04□□□□□ -0.64
SMARCA4-213ENST00000587988 FSCBQ5H9T9 825 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms