RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 CLCA4Q14CN2 919 aa4.95□□□□□ -1.62
VMP1-205ENST00000587470 MFSD13AQ14CX5 517 aa4.95□□□□□ -1.62
VMP1-205ENST00000587470 SEC23BQ15437 767 aa4.95□□□□□ -1.62
VMP1-205ENST00000587470 ZNF260Q3ZCT1 412 aa4.95□□□□□ -1.62
VMP1-205ENST00000587470 NOL8Q76FK4 1167 aaKnown RBP4.95□□□□□ -1.62
VMP1-205ENST00000587470 IRF2BP2Q7Z5L9 587 aa4.95□□□□□ -1.62
VMP1-205ENST00000587470 NRACQ8N912 160 aa4.95□□□□□ -1.62
VMP1-205ENST00000587470 FAM71DQ8N9W8 422 aa4.95□□□□□ -1.62
VMP1-205ENST00000587470 KCNH5Q8NCM2 988 aa4.95□□□□□ -1.62
VMP1-205ENST00000587470 KAZALD1Q96I82 304 aa4.95□□□□□ -1.62
VMP1-205ENST00000587470 STRBPQ96SI9 672 aaKnown RBP4.95□□□□□ -1.62
VMP1-205ENST00000587470 CHMP4AQ9BY43 222 aa4.95□□□□□ -1.62
VMP1-205ENST00000587470 KRTAP1-5Q9BYS1 174 aa4.95□□□□□ -1.62
VMP1-205ENST00000587470 SLIT3O75094 1523 aa4.95□□□□□ -1.62
VMP1-205ENST00000587470 NSD3Q9BZ95 1437 aa4.95□□□□□ -1.62
VMP1-205ENST00000587470 PEAK1Q9H792 1746 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 NFAT5O94916 1531 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 VSTM5A8MXK1 200 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 TLR2O60603 784 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 MT-ND5P03915 603 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 PRF1P14222 555 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 NTSR1P30989 418 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 EIF4A1P60842 406 aaKnown RBP4.94□□□□□ -1.62
VMP1-205ENST00000587470 GPC5P78333 572 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 HTRA4P83105 476 aaPredicted RBP4.94□□□□□ -1.62
VMP1-205ENST00000587470 ID2Q02363 134 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 FHL1Q13642 323 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 KCNAB1Q14722 419 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 GRM3Q14832 879 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 GFOD2Q3B7J2 385 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 CC2D1BQ5T0F9 858 aaKnown RBP4.94□□□□□ -1.62
VMP1-205ENST00000587470 MANEALQ5VSG8 457 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 CLEC9AQ6UXN8 241 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 UBE2Q1Q7Z7E8 422 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 IP6K1Q92551 441 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 COG3Q96JB2 828 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 HIC2Q96JB3 615 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 WACQ9BTA9 647 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 USP29Q9HBJ7 922 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 ZNF212Q9UDV6 495 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 VPS51Q9UID3 782 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 FZD4Q9ULV1 537 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 SLC27A6Q9Y2P4 619 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 COL24A1Q17RW2 1714 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 CGNL1Q0VF96 1302 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 MAP3K19Q56UN5 1328 aa4.94□□□□□ -1.62
VMP1-205ENST00000587470 FRMPD2Q68DX3 1309 aaPredicted RBP4.94□□□□□ -1.62
VMP1-205ENST00000587470 COL18A1P39060 1754 aa4.93□□□□□ -1.62
VMP1-205ENST00000587470 COL15A1P39059 1388 aa4.93□□□□□ -1.62
VMP1-205ENST00000587470 ZMYM2Q9UBW7 1377 aa4.93□□□□□ -1.62
VMP1-205ENST00000587470 NPC1L1Q9UHC9 1359 aa4.93□□□□□ -1.62
VMP1-205ENST00000587470 LY6G6EA0A0G2JKS1 128 aa4.93□□□□□ -1.62
VMP1-205ENST00000587470 TRIM38O00635 465 aa4.93□□□□□ -1.62
VMP1-205ENST00000587470 INSIG1O15503 277 aa4.93□□□□□ -1.62
VMP1-205ENST00000587470 PARNO95453 639 aaKnown RBP4.93□□□□□ -1.62
VMP1-205ENST00000587470 RBL1P28749 1068 aa4.93□□□□□ -1.62
VMP1-205ENST00000587470 COPAP53621 1224 aa4.93□□□□□ -1.62
VMP1-205ENST00000587470 RPS13P62277 151 aaKnown RBP4.93□□□□□ -1.62
VMP1-205ENST00000587470 TXNL4AP83876 142 aaKnown RBP4.93□□□□□ -1.62
VMP1-205ENST00000587470 HSF1Q00613 529 aa4.93□□□□□ -1.62
VMP1-205ENST00000587470 CFHR1Q03591 330 aa4.93□□□□□ -1.62
VMP1-205ENST00000587470 SLC14A1Q13336 389 aa4.93□□□□□ -1.62
VMP1-205ENST00000587470 RRS1Q15050 365 aaKnown RBP4.93□□□□□ -1.62
VMP1-205ENST00000587470 PFKFB3Q16875 520 aaPredicted RBP4.93□□□□□ -1.62
VMP1-205ENST00000587470 VCPIP1Q96JH7 1222 aa4.93□□□□□ -1.62
VMP1-205ENST00000587470 SNX22Q96L94 193 aa4.93□□□□□ -1.62
VMP1-205ENST00000587470 FAM227BQ96M60 508 aa4.93□□□□□ -1.62
VMP1-205ENST00000587470 TMEM184CQ9NVA4 438 aa4.93□□□□□ -1.62
VMP1-205ENST00000587470 POLKQ9UBT6 870 aa4.93□□□□□ -1.62
VMP1-205ENST00000587470 HPSEQ9Y251 543 aa4.93□□□□□ -1.62
VMP1-205ENST00000587470 KNSTRNQ9Y448 316 aa4.93□□□□□ -1.62
VMP1-205ENST00000587470 PHRF1Q9P1Y6 1649 aaKnown RBP4.93□□□□□ -1.62
VMP1-205ENST00000587470 USP54Q70EL1 1684 aa4.92□□□□□ -1.62
VMP1-205ENST00000587470 LMO7Q8WWI1 1683 aa4.92□□□□□ -1.62
VMP1-205ENST00000587470 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.92□□□□□ -1.62
VMP1-205ENST00000587470 TMEM225BP0DP42 221 aa4.92□□□□□ -1.62
VMP1-205ENST00000587470 CTSAP10619 480 aa4.92□□□□□ -1.62
VMP1-205ENST00000587470 TACR3P29371 465 aa4.92□□□□□ -1.62
VMP1-205ENST00000587470 HOXC9P31274 260 aa4.92□□□□□ -1.62
VMP1-205ENST00000587470 THBS4P35443 961 aa4.92□□□□□ -1.62
VMP1-205ENST00000587470 SEMA5AQ13591 1074 aa4.92□□□□□ -1.62
VMP1-205ENST00000587470 FAM110CQ1W6H9 321 aa4.92□□□□□ -1.62
VMP1-205ENST00000587470 TRIM71Q2Q1W2 868 aaKnown RBP4.92□□□□□ -1.62
VMP1-205ENST00000587470 CCDC181Q5TID7 509 aa4.92□□□□□ -1.62
VMP1-205ENST00000587470 ZNF517Q6ZMY9 492 aaPredicted RBP4.92□□□□□ -1.62
VMP1-205ENST00000587470 RNF44Q7L0R7 432 aa4.92□□□□□ -1.62
VMP1-205ENST00000587470 NSMCE1Q8WV22 266 aa4.92□□□□□ -1.62
VMP1-205ENST00000587470 SELENOOQ9BVL4 669 aa4.92□□□□□ -1.62
VMP1-205ENST00000587470 CINPQ9BW66 212 aaPredicted RBP4.92□□□□□ -1.62
VMP1-205ENST00000587470 BRIP1Q9BX63 1249 aa4.92□□□□□ -1.62
VMP1-205ENST00000587470 BTBD1Q9H0C5 482 aa4.92□□□□□ -1.62
VMP1-205ENST00000587470 G3BP2Q9UN86 482 aaKnown RBP4.92□□□□□ -1.62
VMP1-205ENST00000587470 CRB1P82279 1406 aa4.91□□□□□ -1.62
VMP1-205ENST00000587470 CNOT3O75175 753 aaKnown RBP4.91□□□□□ -1.62
VMP1-205ENST00000587470 ANXA2P07355 339 aaKnown RBP4.91□□□□□ -1.62
VMP1-205ENST00000587470 SNHG28P0DPA3 235 aa4.91□□□□□ -1.62
VMP1-205ENST00000587470 RHCEP18577 417 aa4.91□□□□□ -1.62
VMP1-205ENST00000587470 LBX1P52954 281 aa4.91□□□□□ -1.62
VMP1-205ENST00000587470 RHDQ02161 417 aa4.91□□□□□ -1.62
VMP1-205ENST00000587470 SRSF1Q07955 248 aaKnown RBP eCLIP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms