RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 DKK1O94907 266 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 FGFR1OPO95684 399 aaKnown RBP11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 SEMA4FO95754 770 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 LATS1O95835 1130 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 ZBED1O96006 694 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 NR2F2P24468 414 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 CD27P26842 260 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 PSMC2P35998 433 aaKnown RBP11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 ZNF75DP51815 510 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 PMS1P54277 932 aaKnown RBP11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 C21orf59P57076 290 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 KIF19Q2TAC6 998 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 EDRF1Q3B7T1 1238 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 ZNF394Q53GI3 561 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 ANKRD40Q6AI12 368 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 CHST9Q7L1S5 443 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 PIGZQ86VD9 579 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 CACUL1Q86Y37 369 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 IRF2BP1Q8IU81 584 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 SCUBE3Q8IX30 993 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 FAM217AQ8IXS0 508 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 ZC3H3Q8IXZ2 948 aaKnown RBP11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 FAM186BQ8IYM0 893 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 AHI1Q8N157 1196 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 ANKRD52Q8NB46 1076 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 TAS1R2Q8TE23 839 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 SORCS1Q8WY21 1168 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 TMEM176AQ96HP8 235 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 LRIG1Q96JA1 1093 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 IRX2Q9BZI1 471 aaPredicted RBP11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 TRIM5Q9C035 493 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 LRRC4Q9HBW1 653 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 APOBEC3GQ9HC16 384 aaKnown RBP11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 TMEM8AQ9HCN3 771 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 SAMSN1Q9NSI8 373 aaKnown RBP11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 SCML1Q9UN30 329 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 CTNND2Q9UQB3 1225 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 HBS1LQ9Y450 684 aaKnown RBP11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 SNX11Q9Y5W9 270 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 ADAMTS9Q9P2N4 1935 aa11.19□□□□□ -0.62
CSNK1D-226ENST00000585026 CEP192Q8TEP8 1941 aa11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 RNASEH1O60930 286 aaKnown RBP11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 FSBPO95073 299 aa11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 ATP1A3P13637 1013 aa11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 EEF1GP26641 437 aaKnown RBP11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 ACSL1P33121 698 aa11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 TKTL1P51854 596 aa11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 STX17P56962 302 aa11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 ST8SIA6P61647 398 aa11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 FANCCQ00597 558 aa11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 BNC1Q01954 994 aa11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 CYP4F3Q08477 520 aa11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 TRIP4Q15650 581 aaPredicted RBP11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 SMAD1Q15797 465 aaKnown RBP11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 RAB41Q5JT25 222 aa11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 ADGRF1Q5T601 910 aa11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 ZNF776Q68DI1 518 aaPredicted RBP11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 ARHGAP17Q68EM7 881 aa11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 KRT39Q6A163 491 aa11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 PM20D1Q6GTS8 502 aa11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 APTXQ7Z2E3 356 aaKnown RBP11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 TMPRSS12Q86WS5 348 aa11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 CCDC117Q8IWD4 279 aaPredicted RBP11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 RBBP8NLQ8NC74 664 aaPredicted RBP11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 ARID3AQ99856 593 aa11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 ACE2Q9BYF1 805 aaPredicted RBP11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 C6orf106Q9H6K1 298 aaPredicted RBP11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 MMRN2Q9H8L6 949 aa11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 TM9SF3Q9HD45 589 aa11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 TOR4AQ9NXH8 423 aa11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 HESX1Q9UBX0 185 aa11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 FTSJ1Q9UET6 329 aa11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 LIMA1Q9UHB6 759 aaKnown RBP11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 APC2O95996 2303 aa11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 URB1O60287 2271 aaKnown RBP11.18□□□□□ -0.62
CSNK1D-226ENST00000585026 ZZEF1O43149 2961 aa11.17□□□□□ -0.62
CSNK1D-226ENST00000585026 TYW5A2RUC4 315 aaKnown RBP11.17□□□□□ -0.62
CSNK1D-226ENST00000585026 CBFA2T2O43439 604 aa11.17□□□□□ -0.62
CSNK1D-226ENST00000585026 TSPAN3O60637 253 aa11.17□□□□□ -0.62
CSNK1D-226ENST00000585026 DLDP09622 509 aaKnown RBP11.17□□□□□ -0.62
CSNK1D-226ENST00000585026 TRIM49P0CI25 452 aa11.17□□□□□ -0.62
CSNK1D-226ENST00000585026 TRIM49CP0CI26 452 aa11.17□□□□□ -0.62
CSNK1D-226ENST00000585026 C7P10643 843 aa11.17□□□□□ -0.62
CSNK1D-226ENST00000585026 PABPC1P11940 636 aaKnown RBP11.17□□□□□ -0.62
CSNK1D-226ENST00000585026 HLA-EP13747 358 aa11.17□□□□□ -0.62
CSNK1D-226ENST00000585026 POLR2EP19388 210 aaKnown RBP11.17□□□□□ -0.62
CSNK1D-226ENST00000585026 CDK11BP21127 795 aaKnown RBP11.17□□□□□ -0.62
CSNK1D-226ENST00000585026 HOXD9P28356 352 aaPredicted RBP11.17□□□□□ -0.62
CSNK1D-226ENST00000585026 HLA-FP30511 346 aa11.17□□□□□ -0.62
CSNK1D-226ENST00000585026 HNF1BP35680 557 aa11.17□□□□□ -0.62
CSNK1D-226ENST00000585026 YWHAEP62258 255 aaKnown RBP11.17□□□□□ -0.62
CSNK1D-226ENST00000585026 FKBP3Q00688 224 aaKnown RBP11.17□□□□□ -0.62
CSNK1D-226ENST00000585026 PPP3CAQ08209 521 aa11.17□□□□□ -0.62
CSNK1D-226ENST00000585026 ADAM9Q13443 819 aa11.17□□□□□ -0.62
CSNK1D-226ENST00000585026 NR1I3Q14994 352 aa11.17□□□□□ -0.62
CSNK1D-226ENST00000585026 TPD52L1Q16890 204 aaPredicted RBP11.17□□□□□ -0.62
CSNK1D-226ENST00000585026 HS1BP3Q53T59 392 aa11.17□□□□□ -0.62
CSNK1D-226ENST00000585026 CCDC157Q569K6 752 aa11.17□□□□□ -0.62
CSNK1D-226ENST00000585026 C1orf220Q5T0J3 134 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms