RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 METP08581 1390 aa3.38□□□□□ -1.87
VAPA-208ENST00000584796 KIF15Q9NS87 1388 aa3.38□□□□□ -1.87
VAPA-208ENST00000584796 PTCH1Q13635 1447 aa3.38□□□□□ -1.87
VAPA-208ENST00000584796 CLTCL1P53675 1640 aa3.38□□□□□ -1.87
VAPA-208ENST00000584796 SLC22A23A1A5C7 686 aa3.38□□□□□ -1.87
VAPA-208ENST00000584796 CFAP69A5D8W1 941 aa3.38□□□□□ -1.87
VAPA-208ENST00000584796 CTIFO43310 598 aaKnown RBP3.38□□□□□ -1.87
VAPA-208ENST00000584796 SNX2O60749 519 aa3.38□□□□□ -1.87
VAPA-208ENST00000584796 USP12O75317 370 aa3.38□□□□□ -1.87
VAPA-208ENST00000584796 TMIGD3P0DMS9 266 aaPredicted RBP3.38□□□□□ -1.87
VAPA-208ENST00000584796 BTF3P20290 206 aaKnown RBP3.38□□□□□ -1.87
VAPA-208ENST00000584796 RPS6KB1P23443 525 aa3.38□□□□□ -1.87
VAPA-208ENST00000584796 SLC12A2P55011 1212 aa3.38□□□□□ -1.87
VAPA-208ENST00000584796 FMO1Q01740 532 aa3.38□□□□□ -1.87
VAPA-208ENST00000584796 MANEALQ5VSG8 457 aa3.38□□□□□ -1.87
VAPA-208ENST00000584796 CLEC9AQ6UXN8 241 aa3.38□□□□□ -1.87
VAPA-208ENST00000584796 RBM44Q6ZP01 1051 aaKnown RBP3.38□□□□□ -1.87
VAPA-208ENST00000584796 RFX8Q6ZV50 586 aa3.38□□□□□ -1.87
VAPA-208ENST00000584796 DDX56Q9NY93 547 aaKnown RBP3.38□□□□□ -1.87
VAPA-208ENST00000584796 MSRB1Q9NZV6 116 aa3.38□□□□□ -1.87
VAPA-208ENST00000584796 TPCN1Q9ULQ1 816 aa3.38□□□□□ -1.87
VAPA-208ENST00000584796 NEXMIFQ5QGS0 1516 aa3.38□□□□□ -1.87
VAPA-208ENST00000584796 PCNTO95613 3336 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 WNK3Q9BYP7 1800 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 DCCP43146 1447 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 ERBINQ96RT1 1412 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 NCOA3Q9Y6Q9 1424 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 ALS2Q96Q42 1657 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 TRBV5-3A0A0A0MS03 114 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 A0A0G2JK05 382 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 LACTBL1A8MY62 500 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 F8W810 466 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 SPTLC2O15270 562 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 PRPF3O43395 683 aaKnown RBP3.37□□□□□ -1.87
VAPA-208ENST00000584796 SLC28A2O43868 658 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 NDUFB8O95169 186 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 PDGFRBP09619 1106 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 TMEM225BP0DP42 221 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 ATF3P18847 181 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 IBSPP21815 317 aaPredicted RBP3.37□□□□□ -1.87
VAPA-208ENST00000584796 MT3P25713 68 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 IDUAP35475 653 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 ALDH7A1P49419 539 aaKnown RBP3.37□□□□□ -1.87
VAPA-208ENST00000584796 EPHB1P54762 984 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 RAE1P78406 368 aaKnown RBP3.37□□□□□ -1.87
VAPA-208ENST00000584796 ZXDBP98169 803 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 RHDQ02161 417 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 MTAPQ13126 283 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 KCNAB1Q14722 419 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 PRTGQ2VWP7 1150 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 ZNF585BQ52M93 769 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 CXorf57Q6NSI4 855 aaKnown RBP3.37□□□□□ -1.87
VAPA-208ENST00000584796 SESTD1Q86VW0 696 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 SLC44A5Q8NCS7 719 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 MBD3L2Q8NHZ7 208 aaPredicted RBP3.37□□□□□ -1.87
VAPA-208ENST00000584796 PIGKQ92643 395 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 MSI2Q96DH6 328 aaKnown RBP3.37□□□□□ -1.87
VAPA-208ENST00000584796 PRR11Q96HE9 360 aaPredicted RBP3.37□□□□□ -1.87
VAPA-208ENST00000584796 ZNF479Q96JC4 524 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 ZPBPQ9BS86 351 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 TUBB6Q9BUF5 446 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 RNF26Q9BY78 433 aaPredicted RBP3.37□□□□□ -1.87
VAPA-208ENST00000584796 SLCO5A1Q9H2Y9 848 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 SAP30LQ9HAJ7 183 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 PAPOLBQ9NRJ5 636 aaKnown RBP3.37□□□□□ -1.87
VAPA-208ENST00000584796 RRP7BPQ9NSQ0 103 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 DECR2Q9NUI1 292 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 ZIM2Q9NZV7 527 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 TRPC5Q9UL62 973 aaPredicted RBP3.37□□□□□ -1.87
VAPA-208ENST00000584796 PPLO60437 1756 aa3.37□□□□□ -1.87
VAPA-208ENST00000584796 PEAK1Q9H792 1746 aa3.36□□□□□ -1.87
VAPA-208ENST00000584796 KIF1BO60333 1816 aa3.36□□□□□ -1.87
VAPA-208ENST00000584796 KRT86O43790 486 aa3.36□□□□□ -1.87
VAPA-208ENST00000584796 WDR47O94967 919 aa3.36□□□□□ -1.87
VAPA-208ENST00000584796 SYF2O95926 243 aaKnown RBP3.36□□□□□ -1.87
VAPA-208ENST00000584796 HOXB2P14652 356 aa3.36□□□□□ -1.87
VAPA-208ENST00000584796 ZKSCAN1P17029 563 aaPredicted RBP3.36□□□□□ -1.87
VAPA-208ENST00000584796 TBXAS1P24557 533 aaPredicted RBP3.36□□□□□ -1.87
VAPA-208ENST00000584796 PGGT1BP53609 377 aa3.36□□□□□ -1.87
VAPA-208ENST00000584796 FHL3Q13643 280 aa3.36□□□□□ -1.87
VAPA-208ENST00000584796 KRT81Q14533 505 aa3.36□□□□□ -1.87
VAPA-208ENST00000584796 ACOX1Q15067 660 aa3.36□□□□□ -1.87
VAPA-208ENST00000584796 AASDHQ4L235 1098 aaPredicted RBP3.36□□□□□ -1.87
VAPA-208ENST00000584796 Q6ZTC4 211 aa3.36□□□□□ -1.87
VAPA-208ENST00000584796 UNC13DQ70J99 1090 aa3.36□□□□□ -1.87
VAPA-208ENST00000584796 ASB5Q8WWX0 329 aa3.36□□□□□ -1.87
VAPA-208ENST00000584796 MSLNLQ96KJ4 702 aa3.36□□□□□ -1.87
VAPA-208ENST00000584796 FAM227BQ96M60 508 aa3.36□□□□□ -1.87
VAPA-208ENST00000584796 TMEM204Q9BSN7 226 aa3.36□□□□□ -1.87
VAPA-208ENST00000584796 VPS33BQ9H267 617 aa3.36□□□□□ -1.87
VAPA-208ENST00000584796 C1orf112Q9NSG2 853 aa3.36□□□□□ -1.87
VAPA-208ENST00000584796 ABHD10Q9NUJ1 306 aa3.36□□□□□ -1.87
VAPA-208ENST00000584796 SELENONQ9NZV5 590 aa3.36□□□□□ -1.87
VAPA-208ENST00000584796 AGO2Q9UKV8 859 aaKnown RBP3.36□□□□□ -1.87
VAPA-208ENST00000584796 COG5Q9UP83 839 aa3.36□□□□□ -1.87
VAPA-208ENST00000584796 HPSEQ9Y251 543 aa3.36□□□□□ -1.87
VAPA-208ENST00000584796 CDC42BPGQ6DT37 1551 aa3.36□□□□□ -1.87
VAPA-208ENST00000584796 PHRF1Q9P1Y6 1649 aaKnown RBP3.36□□□□□ -1.87
VAPA-208ENST00000584796 DAPK1P53355 1430 aa3.36□□□□□ -1.87
VAPA-208ENST00000584796 TMEM272A0A1B0GTI8 110 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms