RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 MAGOHP61326 146 aaKnown RBP10.29□□□□□ -0.76
MKS1-212ENST00000583577 NR1H3Q13133 447 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 RIPK1Q13546 671 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 PON2Q15165 354 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 PSMD5Q16401 504 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 SV2CQ496J9 727 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 RNF187Q5TA31 235 aaPredicted RBP10.29□□□□□ -0.76
MKS1-212ENST00000583577 C9orf57Q5W0N0 161 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 PKN3Q6P5Z2 889 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 TXNDC11Q6PKC3 985 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 DSTYKQ6XUX3 929 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 RELL1Q8IUW5 271 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 CCDC13Q8IYE1 715 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 GPR65Q8IYL9 337 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 FAM71AQ8IYT1 594 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 RIBC1Q8N443 379 aaPredicted RBP10.29□□□□□ -0.76
MKS1-212ENST00000583577 C3orf58Q8NDZ4 430 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 PARD3BQ8TEW8 1205 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 RAPGEF5Q92565 580 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 MAGOHBQ96A72 148 aaKnown RBP10.29□□□□□ -0.76
MKS1-212ENST00000583577 GRAMD1AQ96CP6 724 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 TCEAL4Q96EI5 215 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 SGSM3Q96HU1 749 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 SUSD3Q96L08 255 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 UBL7Q96S82 380 aaPredicted RBP10.29□□□□□ -0.76
MKS1-212ENST00000583577 NCAPGQ9BPX3 1015 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 MTMR12Q9C0I1 747 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 PPANQ9NQ55 473 aaKnown RBP10.29□□□□□ -0.76
MKS1-212ENST00000583577 AVENQ9NQS1 362 aaPredicted RBP10.29□□□□□ -0.76
MKS1-212ENST00000583577 KLC4Q9NSK0 619 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 CTTNBP2NLQ9P2B4 639 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 AGAP1Q9UPQ3 857 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 SLC8A2Q9UPR5 921 aa10.29□□□□□ -0.76
MKS1-212ENST00000583577 ZNF638Q14966 1978 aaKnown RBP10.28□□□□□ -0.76
MKS1-212ENST00000583577 NOTCH2Q04721 2471 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 CCDC163A0A0D9SF12 145 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 I3L4J1 428 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 PIRO00625 290 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 ECEL1O95672 775 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 GAS8O95995 478 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 FTLP02792 175 aaPredicted RBP10.28□□□□□ -0.76
MKS1-212ENST00000583577 POU2F2P09086 479 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 DRD4P21917 467 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 POLR2BP30876 1174 aaKnown RBP10.28□□□□□ -0.76
MKS1-212ENST00000583577 MAPK8P45983 427 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 PEX5P50542 639 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 DNA2P51530 1060 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 GSCP56915 257 aaPredicted RBP10.28□□□□□ -0.76
MKS1-212ENST00000583577 LILRA4P59901 499 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 RNASE9P60153 205 aaKnown RBP10.28□□□□□ -0.76
MKS1-212ENST00000583577 IRX4P78413 519 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 RBP5P82980 135 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 CENPCQ03188 943 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 IFT88Q13099 833 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 SNCBQ16143 134 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 CBWD6Q4V339 395 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 ANKRD20A8PQ5CZ79 823 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 CBWD3Q5JTY5 395 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 CBWD5Q5RIA9 395 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 KRT39Q6A163 491 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 CD300LGQ6UXG3 332 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 TRIM72Q6ZMU5 477 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 PIGWQ7Z7B1 504 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 SLC13A5Q86YT5 568 aaPredicted RBP10.28□□□□□ -0.76
MKS1-212ENST00000583577 YAF2Q8IY57 180 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 TMEM130Q8N3G9 435 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 C1orf127Q8N9H9 656 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 APPL2Q8NEU8 664 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 OR5B17Q8NGF7 314 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 CCT6BQ92526 530 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 SHC3Q92529 594 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 CD101Q93033 1021 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 CCDC114Q96M63 670 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 ASB16Q96NS5 453 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 CCDC77Q9BR77 488 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 PHACTR1Q9C0D0 580 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 THAP2Q9H0W7 228 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 NEUROG2Q9H2A3 272 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 CENPHQ9H3R5 247 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 C8orf33Q9H7E9 229 aaPredicted RBP10.28□□□□□ -0.76
MKS1-212ENST00000583577 OSGEPQ9NPF4 335 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 SCUBE2Q9NQ36 999 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 PCDHB8Q9UN66 801 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 ATP8A1Q9Y2Q0 1164 aa10.28□□□□□ -0.76
MKS1-212ENST00000583577 WDR27A2RRH5 827 aa10.27□□□□□ -0.77
MKS1-212ENST00000583577 CCT8L1PA6NM43 557 aa10.27□□□□□ -0.77
MKS1-212ENST00000583577 SPECC1L-ADORA2AF8WAN1 911 aa10.27□□□□□ -0.77
MKS1-212ENST00000583577 H7C4K7 107 aa10.27□□□□□ -0.77
MKS1-212ENST00000583577 J3QKU1 62 aa10.27□□□□□ -0.77
MKS1-212ENST00000583577 M0QZQ0 153 aa10.27□□□□□ -0.77
MKS1-212ENST00000583577 FOXN3O00409 490 aaPredicted RBP10.27□□□□□ -0.77
MKS1-212ENST00000583577 PPEF2O14830 753 aa10.27□□□□□ -0.77
MKS1-212ENST00000583577 SYN3O14994 580 aa10.27□□□□□ -0.77
MKS1-212ENST00000583577 THAP12O43422 761 aa10.27□□□□□ -0.77
MKS1-212ENST00000583577 ODC1P11926 461 aa10.27□□□□□ -0.77
MKS1-212ENST00000583577 PTPN2P17706 415 aa10.27□□□□□ -0.77
MKS1-212ENST00000583577 FGFR3P22607 806 aa10.27□□□□□ -0.77
MKS1-212ENST00000583577 IGFBP6P24592 240 aaPredicted RBP10.27□□□□□ -0.77
MKS1-212ENST00000583577 TKTP29401 623 aaKnown RBP10.27□□□□□ -0.77
MKS1-212ENST00000583577 COILP38432 576 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms