RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 LAIR1Q6GTX8 287 aa7.11□□□□□ -1.27
PPP4R1-216ENST00000580283 EFCAB12Q6NXP0 572 aa7.11□□□□□ -1.27
PPP4R1-216ENST00000580283 CYP26C1Q6V0L0 522 aa7.11□□□□□ -1.27
PPP4R1-216ENST00000580283 TRMT1LQ7Z2T5 733 aaKnown RBP7.11□□□□□ -1.27
PPP4R1-216ENST00000580283 CXorf67Q86X51 503 aaPredicted RBP7.11□□□□□ -1.27
PPP4R1-216ENST00000580283 TICAM2Q86XR7 235 aa7.11□□□□□ -1.27
PPP4R1-216ENST00000580283 D2HGDHQ8N465 521 aa7.11□□□□□ -1.27
PPP4R1-216ENST00000580283 LRRC71Q8N4P6 559 aa7.11□□□□□ -1.27
PPP4R1-216ENST00000580283 SRBD1Q8N5C6 995 aaKnown RBP7.11□□□□□ -1.27
PPP4R1-216ENST00000580283 METTL13Q8N6R0 699 aa7.11□□□□□ -1.27
PPP4R1-216ENST00000580283 TNPO1Q92973 898 aaKnown RBP7.11□□□□□ -1.27
PPP4R1-216ENST00000580283 RPS6KC1Q96S38 1066 aa7.11□□□□□ -1.27
PPP4R1-216ENST00000580283 UBAC1Q9BSL1 405 aa7.11□□□□□ -1.27
PPP4R1-216ENST00000580283 MRPL9Q9BYD2 267 aaKnown RBP7.11□□□□□ -1.27
PPP4R1-216ENST00000580283 ANO3Q9BYT9 981 aa7.11□□□□□ -1.27
PPP4R1-216ENST00000580283 PLA2G2FQ9BZM2 168 aa7.11□□□□□ -1.27
PPP4R1-216ENST00000580283 KRT23Q9C075 422 aa7.11□□□□□ -1.27
PPP4R1-216ENST00000580283 CHMP4BQ9H444 224 aaKnown RBP7.11□□□□□ -1.27
PPP4R1-216ENST00000580283 PSTPIP2Q9H939 334 aa7.11□□□□□ -1.27
PPP4R1-216ENST00000580283 RCAN3Q9UKA8 241 aa7.11□□□□□ -1.27
PPP4R1-216ENST00000580283 TESMINQ9Y4I5 508 aa7.11□□□□□ -1.27
PPP4R1-216ENST00000580283 TRIP11Q15643 1979 aa7.11□□□□□ -1.27
PPP4R1-216ENST00000580283 PCNX2A6NKB5 2137 aa7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 NUP205Q92621 2012 aa7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 KALRNO60229 2985 aa7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 MAST4O15021 2626 aa7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 NEMP1O14524 444 aa7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 NRP2O60462 931 aa7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 LRP3O75074 770 aa7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 TOX4O94842 621 aa7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 PLEKHA8P1O95397 391 aa7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 TOP3BO95985 862 aaKnown RBP7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 JUNP05412 331 aaKnown RBP7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 RETP07949 1114 aa7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 VSIG10L2P0DP72 767 aa7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 CPEP16870 476 aa7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 SRSF5Q13243 272 aaKnown RBP7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 NOMO2Q5JPE7 1267 aa7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 SPDYAQ5MJ70 313 aa7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 GET4Q7L5D6 327 aaPredicted RBP7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 ADGRE4PQ86SQ3 457 aa7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 SGMS1Q86VZ5 419 aa7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 RASSF3Q86WH2 238 aa7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 PALB2Q86YC2 1186 aa7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 CELF5Q8N6W0 485 aaKnown RBP7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 STAMQ92783 540 aa7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 CUL5Q93034 780 aa7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 SECISBP2LQ93073 1101 aaKnown RBP7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 PGBD1Q96JS3 809 aa7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 B3GALT6Q96L58 329 aa7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 SPZ1Q9BXG8 430 aa7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 ZNF302Q9NR11 478 aa7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 MRPL17Q9NRX2 175 aaKnown RBP7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 MARCH5Q9NX47 278 aa7.1□□□□□ -1.27
PPP4R1-216ENST00000580283 PRSS38A1L453 326 aa7.09□□□□□ -1.27
PPP4R1-216ENST00000580283 SRRM3A6NNA2 597 aaPredicted RBP7.09□□□□□ -1.27
PPP4R1-216ENST00000580283 DDX39AO00148 427 aaKnown RBP7.09□□□□□ -1.27
PPP4R1-216ENST00000580283 IFIT3O14879 490 aaKnown RBP7.09□□□□□ -1.27
PPP4R1-216ENST00000580283 ADAMTS3O15072 1205 aa7.09□□□□□ -1.27
PPP4R1-216ENST00000580283 AK2P54819 239 aa7.09□□□□□ -1.27
PPP4R1-216ENST00000580283 NRG3P56975 720 aa7.09□□□□□ -1.27
PPP4R1-216ENST00000580283 SF3A2Q15428 464 aaKnown RBP7.09□□□□□ -1.27
PPP4R1-216ENST00000580283 CEP55Q53EZ4 464 aa7.09□□□□□ -1.27
PPP4R1-216ENST00000580283 CWC27Q6UX04 472 aaKnown RBP7.09□□□□□ -1.27
PPP4R1-216ENST00000580283 GAREM2Q75VX8 874 aa7.09□□□□□ -1.27
PPP4R1-216ENST00000580283 SPRED1Q7Z699 444 aa7.09□□□□□ -1.27
PPP4R1-216ENST00000580283 GRASPQ7Z6J2 395 aaPredicted RBP7.09□□□□□ -1.27
PPP4R1-216ENST00000580283 MRPL10Q7Z7H8 261 aaKnown RBP7.09□□□□□ -1.27
PPP4R1-216ENST00000580283 ITFG1Q8TB96 612 aa7.09□□□□□ -1.27
PPP4R1-216ENST00000580283 HDAC7Q8WUI4 952 aa7.09□□□□□ -1.27
PPP4R1-216ENST00000580283 GAB3Q8WWW8 586 aa7.09□□□□□ -1.27
PPP4R1-216ENST00000580283 FGF13Q92913 245 aa7.09□□□□□ -1.27
PPP4R1-216ENST00000580283 CEP89Q96ST8 783 aa7.09□□□□□ -1.27
PPP4R1-216ENST00000580283 GPHA2Q96T91 129 aa7.09□□□□□ -1.27
PPP4R1-216ENST00000580283 KXD1Q9BQD3 176 aa7.09□□□□□ -1.27
PPP4R1-216ENST00000580283 SDF4Q9BRK5 362 aa7.09□□□□□ -1.27
PPP4R1-216ENST00000580283 FAM126AQ9BYI3 521 aaPredicted RBP7.09□□□□□ -1.27
PPP4R1-216ENST00000580283 HEBP1Q9NRV9 189 aa7.09□□□□□ -1.27
PPP4R1-216ENST00000580283 C2orf42Q9NWW7 574 aa7.09□□□□□ -1.27
PPP4R1-216ENST00000580283 MIOSQ9NXC5 875 aa7.09□□□□□ -1.27
PPP4R1-216ENST00000580283 GMEB2Q9UKD1 530 aa7.09□□□□□ -1.27
PPP4R1-216ENST00000580283 IGLV3-22A0A075B6J6 115 aa7.08□□□□□ -1.28
PPP4R1-216ENST00000580283 A0A0A6YYK5 440 aaPredicted RBP7.08□□□□□ -1.28
PPP4R1-216ENST00000580283 CYSRT1A8MQ03 144 aa7.08□□□□□ -1.28
PPP4R1-216ENST00000580283 FAM86B1E9PN63 330 aa7.08□□□□□ -1.28
PPP4R1-216ENST00000580283 TAF4O00268 1085 aa7.08□□□□□ -1.28
PPP4R1-216ENST00000580283 KCNK5O95279 499 aa7.08□□□□□ -1.28
PPP4R1-216ENST00000580283 GLUD1P00367 558 aa7.08□□□□□ -1.28
PPP4R1-216ENST00000580283 ALDH2P05091 517 aa7.08□□□□□ -1.28
PPP4R1-216ENST00000580283 FAM86B2P0C5J1 330 aa7.08□□□□□ -1.28
PPP4R1-216ENST00000580283 RPL17P18621 184 aaKnown RBP7.08□□□□□ -1.28
PPP4R1-216ENST00000580283 SMARCA1P28370 1054 aa7.08□□□□□ -1.28
PPP4R1-216ENST00000580283 MAGEA9P43362 315 aa7.08□□□□□ -1.28
PPP4R1-216ENST00000580283 KIR2DL3P43628 341 aa7.08□□□□□ -1.28
PPP4R1-216ENST00000580283 GPR15P49685 360 aa7.08□□□□□ -1.28
PPP4R1-216ENST00000580283 LIMK1P53667 647 aa7.08□□□□□ -1.28
PPP4R1-216ENST00000580283 MANFP55145 182 aaKnown RBP7.08□□□□□ -1.28
PPP4R1-216ENST00000580283 SESN3P58005 492 aa7.08□□□□□ -1.28
PPP4R1-216ENST00000580283 CCDC6Q16204 474 aa7.08□□□□□ -1.28
PPP4R1-216ENST00000580283 IMMTQ16891 758 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms