RNA–Protein interactions for RNA: ENST00000579838.1

NUP85-213, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 373 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-213ENST00000579838 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.77□□□□□ -1.65
NUP85-213ENST00000579838 IL1RAPL1Q9NZN1 696 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 SEPT10Q9P0V9 454 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 RCOR3Q9P2K3 495 aaPredicted RBP4.77□□□□□ -1.65
NUP85-213ENST00000579838 PRKAG3Q9UGI9 489 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 SFMBT1Q9UHJ3 866 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 GGA2Q9UJY4 613 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 FBXW11Q9UKB1 542 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 STAP1Q9ULZ2 295 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 NOD1Q9Y239 953 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 PRG3Q9Y2Y8 225 aaPredicted RBP4.77□□□□□ -1.65
NUP85-213ENST00000579838 ACTL7BQ9Y614 415 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 ANKRD36A6QL64 1941 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 ANAPC1Q9H1A4 1944 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 SF3B1O75533 1304 aaKnown RBP eCLIP4.76□□□□□ -1.65
NUP85-213ENST00000579838 A0A1W2PQH9 124 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 WDR91A4D1P6 747 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 FAM47DPA6NHR8 397 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 FAM159BA6NKW6 160 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 CCT8L1PA6NM43 557 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 HACD1B0YJ81 288 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 TRIM49D1C9J1S8 452 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 KCNK1O00180 336 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 NDC80O14777 642 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 SNPHO15079 494 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 ZBTB24O43167 697 aaPredicted RBP4.76□□□□□ -1.65
NUP85-213ENST00000579838 IRAK2O43187 625 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 USP12O75317 370 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 RFPL1O75677 317 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 B3GAT3O94766 335 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 LRIG2O94898 1065 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 UBOX5O94941 541 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 FSBPO95073 299 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 ALDH1A1P00352 501 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 APOEP02649 317 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 PRKCGP05129 697 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 APRTP07741 180 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 DHRS4L1P0CG22 281 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 PYGBP11216 843 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 ZFXP17010 805 aaPredicted RBP4.76□□□□□ -1.65
NUP85-213ENST00000579838 KRT15P19012 456 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 NFKB1P19838 968 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 TYMPP19971 482 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 CA4P22748 312 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 PCSK1P29120 753 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 ATP5DP30049 168 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 GRK4P32298 578 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 STX2P32856 288 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 PHBP35232 272 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 PBX3P40426 434 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 CCNFP41002 786 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 MSH2P43246 934 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 ETV4P43268 484 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 SLC11A1P49279 550 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 GLUD2P49448 558 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 CDK7P50613 346 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 SLC5A3P53794 718 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 TTC3P53804 2025 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 SNX16P57768 344 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 TPI1P60174 286 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 SLC18A2Q05940 514 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 ACTN3Q08043 901 aaPredicted RBP4.76□□□□□ -1.65
NUP85-213ENST00000579838 NIPAL4Q0D2K0 466 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 GALNT2Q10471 571 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 AP1B1Q10567 949 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 DNAJC3Q13217 504 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 NOGQ13253 232 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 IHHQ14623 411 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 ITIH4Q14624 930 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 LACTB2Q53H82 288 aaPredicted RBP4.76□□□□□ -1.65
NUP85-213ENST00000579838 NOMO2Q5JPE7 1267 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 MANEALQ5VSG8 457 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 NUGGCQ68CJ6 796 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 HEATR6Q6AI08 1181 aaKnown RBP4.76□□□□□ -1.65
NUP85-213ENST00000579838 DCLRE1AQ6PJP8 1040 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 ATG14Q6ZNE5 492 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 ARHGEF18Q6ZSZ5 1173 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 CEP128Q6ZU80 1094 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 LRRC8DQ7L1W4 858 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 OTOP3Q7RTS5 596 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 TAS1R1Q7RTX1 841 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 RNF180Q86T96 592 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 TAX1BP1Q86VP1 789 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 TMEM173Q86WV6 379 aaPredicted RBP4.76□□□□□ -1.65
NUP85-213ENST00000579838 METTL23Q86XA0 190 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 PSTKQ8IV42 348 aaKnown RBP4.76□□□□□ -1.65
NUP85-213ENST00000579838 FAM126BQ8IXS8 530 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 ZNF683Q8IZ20 524 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 PDIK1LQ8N165 341 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 VPS52Q8N1B4 723 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 SCML4Q8N228 414 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 PPM1NQ8N819 430 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 PCSK9Q8NBP7 692 aaKnown RBP4.76□□□□□ -1.65
NUP85-213ENST00000579838 CCDC197Q8NCU1 140 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 OR52K1Q8NGK4 314 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 RFWD2Q8NHY2 731 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 TCP10LQ8TDR4 215 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 GPR152Q8TDT2 470 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 USP33Q8TEY7 942 aa4.76□□□□□ -1.65
NUP85-213ENST00000579838 SH3TC2Q8TF17 1288 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms