RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 ICAM1P05362 532 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 KRT4P19013 534 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 MAPK4P31152 587 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 SLC16A2P36021 539 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 VAV2P52735 878 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 NAPAP54920 295 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 NLRP5P59047 1200 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 NUCB2P80303 420 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 MXRA7P84157 204 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 PIGFQ07326 219 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 KLF10Q13118 480 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 CUL4AQ13619 759 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 PFKFB3Q16875 520 aaPredicted RBP5.68□□□□□ -1.5
PTPRM-207ENST00000578571 FAM110CQ1W6H9 321 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 SHROOM1Q2M3G4 852 aaPredicted RBP5.68□□□□□ -1.5
PTPRM-207ENST00000578571 MAEAQ7L5Y9 396 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 GPR149Q86SP6 731 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 USP37Q86T82 979 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 RAB11FIP4Q86YS3 637 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 VRK3Q8IV63 474 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 ULK2Q8IYT8 1036 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 CPXCR1Q8N123 301 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 NECAB1Q8N987 351 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 GPRC5AQ8NFJ5 357 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 POC1BQ8TC44 478 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 NEU4Q8WWR8 484 aaPredicted RBP5.68□□□□□ -1.5
PTPRM-207ENST00000578571 C8orf76Q96K31 380 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 TRIB1Q96RU8 372 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 NAP1L4Q99733 375 aaKnown RBP5.68□□□□□ -1.5
PTPRM-207ENST00000578571 PAGR1Q9BTK6 254 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 CNPPD1Q9BV87 410 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 UBA5Q9GZZ9 404 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 RANBP17Q9H2T7 1088 aaKnown RBP5.68□□□□□ -1.5
PTPRM-207ENST00000578571 MROH8Q9H579 483 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 ACAD9Q9H845 621 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 JMJD4Q9H9V9 463 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 SLC38A10Q9HBR0 1119 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 SAGE1Q9NXZ1 904 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.68□□□□□ -1.5
PTPRM-207ENST00000578571 ING1Q9UK53 422 aaPredicted RBP5.68□□□□□ -1.5
PTPRM-207ENST00000578571 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.68□□□□□ -1.5
PTPRM-207ENST00000578571 ATP6V1DQ9Y5K8 247 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 PHIPQ8WWQ0 1821 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 COL4A3Q01955 1670 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 PFASO15067 1338 aa5.68□□□□□ -1.5
PTPRM-207ENST00000578571 PRAMEF33A0A0G2JMD5 474 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 ESYT2A0FGR8 921 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 PIPSLA2A3N6 862 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 GRID2IPA4D2P6 1211 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 CAPN8A6NHC0 703 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 STRNO43815 780 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 TLR2O60603 784 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 PRAMEF10O60809 474 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 PLEKHA8P1O95397 391 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 EGR2P11161 476 aaPredicted RBP5.67□□□□□ -1.5
PTPRM-207ENST00000578571 FDXRP22570 491 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 HOXD10P28358 340 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 GJB2P29033 226 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 GDF5P43026 501 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 TOB1P50616 345 aaPredicted RBP5.67□□□□□ -1.5
PTPRM-207ENST00000578571 ANXA11P50995 505 aaKnown RBP5.67□□□□□ -1.5
PTPRM-207ENST00000578571 KCTD2Q14681 263 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 PTPAQ15257 358 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 CNN3Q15417 329 aaKnown RBP5.67□□□□□ -1.5
PTPRM-207ENST00000578571 QRICH1Q2TAL8 776 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 USH1GQ495M9 461 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 TREML2Q5T2D2 321 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 WDR78Q5VTH9 848 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 SNRNP48Q6IEG0 339 aaKnown RBP5.67□□□□□ -1.5
PTPRM-207ENST00000578571 CCDC174Q6PII3 467 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 CLNKQ7Z7G1 428 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 SRBD1Q8N5C6 995 aaKnown RBP5.67□□□□□ -1.5
PTPRM-207ENST00000578571 PCSK9Q8NBP7 692 aaKnown RBP5.67□□□□□ -1.5
PTPRM-207ENST00000578571 SLC16A11Q8NCK7 471 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 SOCS4Q8WXH5 440 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 PIBF1Q8WXW3 757 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 PHKBQ93100 1093 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 C8orf48Q96LL4 319 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 PIGSQ96S52 555 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 SMOQ99835 787 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 KRTAP4-5Q9BYR2 181 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 SPATC1LQ9H0A9 340 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 FAM204AQ9H8W3 233 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 BARHL2Q9NY43 387 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 ADD3Q9UEY8 706 aaKnown RBP5.67□□□□□ -1.5
PTPRM-207ENST00000578571 NOL7Q9UMY1 257 aaKnown RBP5.67□□□□□ -1.5
PTPRM-207ENST00000578571 MED16Q9Y2X0 877 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 NEU2Q9Y3R4 380 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 PTPRFP10586 1907 aa5.67□□□□□ -1.5
PTPRM-207ENST00000578571 LOC102724159A0A0B4J2E5 919 aa5.66□□□□□ -1.5
PTPRM-207ENST00000578571 CCDC194A0A1B0GVG4 234 aa5.66□□□□□ -1.5
PTPRM-207ENST00000578571 A0A1W2PPL8 197 aa5.66□□□□□ -1.5
PTPRM-207ENST00000578571 VPS37CA5D8V6 355 aaPredicted RBP5.66□□□□□ -1.5
PTPRM-207ENST00000578571 SMCO2A6NFE2 343 aa5.66□□□□□ -1.5
PTPRM-207ENST00000578571 GCOM1H8Y6P7 765 aaPredicted RBP5.66□□□□□ -1.5
PTPRM-207ENST00000578571 M0QYG6 137 aa5.66□□□□□ -1.5
PTPRM-207ENST00000578571 TPP1O14773 563 aa5.66□□□□□ -1.5
PTPRM-207ENST00000578571 MARCH6O60337 910 aa5.66□□□□□ -1.5
PTPRM-207ENST00000578571 LARGE1O95461 756 aa5.66□□□□□ -1.5
PTPRM-207ENST00000578571 ZBED1O96006 694 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms