RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 NR3C2P08235 984 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 THRAP10827 490 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 TPD52P55327 224 aaPredicted RBP9.83□□□□□ -0.84
CCDC40-212ENST00000574799 KLF1Q13351 362 aaPredicted RBP9.83□□□□□ -0.84
CCDC40-212ENST00000574799 MAMLD1Q13495 774 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 ANKDD1AQ495B1 522 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 MOB2Q70IA6 237 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 SAMD3Q8N6K7 520 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 KYQ8NBH2 561 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 DEPTORQ8TB45 409 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 CDKL2Q92772 493 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 C1orf21Q9H246 121 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 ITGA11Q9UKX5 1188 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 POLIQ9UNA4 740 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 TCRBV7S3A2A0A539 114 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 AKAP10O43572 662 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 SPAG6O75602 509 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 ZBED1O96006 694 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 MAPTP10636 758 aaKnown RBP9.83□□□□□ -0.84
CCDC40-212ENST00000574799 EDNRBP24530 442 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 TYK2P29597 1187 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 NRLP54845 237 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 MYBPC1Q00872 1141 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 ROR1Q01973 937 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 N4BP2L1Q5TBK1 243 aaPredicted RBP9.83□□□□□ -0.84
CCDC40-212ENST00000574799 SPOPLQ6IQ16 392 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 SCYL2Q6P3W7 929 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 FRMD7Q6ZUT3 714 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 KIAA2013Q8IYS2 634 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 PDZD8Q8NEN9 1154 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 NTPCRQ9BSD7 190 aaKnown RBP9.83□□□□□ -0.84
CCDC40-212ENST00000574799 TXNRD2Q9NNW7 524 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 DDX56Q9NY93 547 aaKnown RBP9.83□□□□□ -0.84
CCDC40-212ENST00000574799 ATP11BQ9Y2G3 1177 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 AP4S1Q9Y587 144 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 IQCA1LA6NCM1 817 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 CFAP99D6REC4 459 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 TPST1O60507 370 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 TMEM63AO94886 807 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 TOP3BO95985 862 aaKnown RBP9.83□□□□□ -0.84
CCDC40-212ENST00000574799 BPGMP07738 259 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 TCF4P15884 667 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 ITGAXP20702 1163 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 CD151P48509 253 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 CDK9P50750 372 aaKnown RBP9.83□□□□□ -0.84
CCDC40-212ENST00000574799 GDF10P55107 478 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 DMP1Q13316 513 aaPredicted RBP9.83□□□□□ -0.84
CCDC40-212ENST00000574799 INAQ16352 499 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 PERM1Q5SV97 790 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 TMEM214Q6NUQ4 689 aaKnown RBP9.83□□□□□ -0.84
CCDC40-212ENST00000574799 ZFP1Q6P2D0 407 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 ZBTB49Q6ZSB9 765 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 TMCO5AQ8N6Q1 288 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 ADCY4Q8NFM4 1077 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 ACTRT2Q8TDY3 377 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 PDCD6IPQ8WUM4 868 aaKnown RBP9.83□□□□□ -0.84
CCDC40-212ENST00000574799 CYGBQ8WWM9 190 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 CCDC138Q96M89 665 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 TUT1Q9H6E5 874 aaKnown RBP9.83□□□□□ -0.84
CCDC40-212ENST00000574799 ATAD3AQ9NVI7 634 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 PLK2Q9NYY3 685 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 PCDHGB4Q9UN71 923 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 DRG1Q9Y295 367 aaKnown RBP9.83□□□□□ -0.84
CCDC40-212ENST00000574799 PCDHGB5Q9Y5G0 923 aa9.83□□□□□ -0.84
CCDC40-212ENST00000574799 PTPRJQ12913 1337 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 A0A0B4J269 797 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 FUOMA2VDF0 154 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 SOWAHBA6NEL2 793 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 ZBTB42B2RXF5 422 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 KRT75O95678 551 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 MYCLP12524 364 aaPredicted RBP9.82□□□□□ -0.84
CCDC40-212ENST00000574799 AOC1P19801 751 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 KPNA1P52294 538 aaPredicted RBP9.82□□□□□ -0.84
CCDC40-212ENST00000574799 OCA2Q04671 838 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 ADGRE1Q14246 886 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 NEDD8Q15843 81 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 ENOSF1Q7L5Y1 443 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 SIX6OS1Q8N1H7 587 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 FAM47BQ8NA70 645 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 IRGQQ8WZA9 623 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 KLC2Q9H0B6 622 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 KMT5AQ9NQR1 393 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 SMYD2Q9NRG4 433 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 K7EPI3 171 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 KCNN4O15554 427 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 CNOT3O75175 753 aaKnown RBP9.82□□□□□ -0.84
CCDC40-212ENST00000574799 ITGBL1O95965 494 aaPredicted RBP9.82□□□□□ -0.84
CCDC40-212ENST00000574799 ETFBP38117 255 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 GSTM4Q03013 218 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 SNAPC2Q13487 334 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 TCEAL1Q15170 157 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 CYP4A22Q5TCH4 519 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 LBX2Q6XYB7 198 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 UTS2BQ765I0 119 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 APOBEC3FQ8IUX4 373 aaKnown RBP9.82□□□□□ -0.84
CCDC40-212ENST00000574799 CENPSQ8N2Z9 138 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 SCAIQ8N9R8 606 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 FBXL18Q96ME1 805 aa9.82□□□□□ -0.84
CCDC40-212ENST00000574799 SENP6Q9GZR1 1112 aaPredicted RBP9.82□□□□□ -0.84
CCDC40-212ENST00000574799 RNPEPQ9H4A4 650 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms