RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 EBF2Q9HAK2 575 aa20.69■□□□□ 0.9
CCDC40-206ENST00000572083 A0A1W2PPC4 97 aa20.68■□□□□ 0.9
CCDC40-206ENST00000572083 TK2O00142 265 aa20.68■□□□□ 0.9
CCDC40-206ENST00000572083 ATP5BP06576 529 aaKnown RBP20.68■□□□□ 0.9
CCDC40-206ENST00000572083 CD70P32970 193 aa20.68■□□□□ 0.9
CCDC40-206ENST00000572083 ACADVLP49748 655 aa20.68■□□□□ 0.9
CCDC40-206ENST00000572083 TARDBPQ13148 414 aaKnown RBP eCLIP20.68■□□□□ 0.9
CCDC40-206ENST00000572083 SHBQ15464 509 aa20.68■□□□□ 0.9
CCDC40-206ENST00000572083 HES3Q5TGS1 186 aa20.68■□□□□ 0.9
CCDC40-206ENST00000572083 NCEH1Q6PIU2 408 aa20.68■□□□□ 0.9
CCDC40-206ENST00000572083 RNF139Q8WU17 664 aa20.68■□□□□ 0.9
CCDC40-206ENST00000572083 TMEM176AQ96HP8 235 aa20.68■□□□□ 0.9
CCDC40-206ENST00000572083 RSPH9Q9H1X1 276 aaPredicted RBP20.68■□□□□ 0.9
CCDC40-206ENST00000572083 PABPC3Q9H361 631 aaKnown RBP20.68■□□□□ 0.9
CCDC40-206ENST00000572083 CISHQ9NSE2 258 aa20.68■□□□□ 0.9
CCDC40-206ENST00000572083 OLA1Q9NTK5 396 aaKnown RBP20.68■□□□□ 0.9
CCDC40-206ENST00000572083 FBXL12Q9NXK8 326 aa20.68■□□□□ 0.9
CCDC40-206ENST00000572083 PCDHA7Q9UN72 937 aa20.68■□□□□ 0.9
CCDC40-206ENST00000572083 NCKAP1Q9Y2A7 1128 aa20.68■□□□□ 0.9
CCDC40-206ENST00000572083 HBS1LQ9Y450 684 aaKnown RBP20.68■□□□□ 0.9
CCDC40-206ENST00000572083 ATMQ13315 3056 aa20.68■□□□□ 0.9
CCDC40-206ENST00000572083 CALUO43852 315 aaPredicted RBP20.67■□□□□ 0.9
CCDC40-206ENST00000572083 POLR2EP19388 210 aaKnown RBP20.67■□□□□ 0.9
CCDC40-206ENST00000572083 NR2F2P24468 414 aa20.67■□□□□ 0.9
CCDC40-206ENST00000572083 ME1P48163 572 aa20.67■□□□□ 0.9
CCDC40-206ENST00000572083 RAD23BP54727 409 aa20.67■□□□□ 0.9
CCDC40-206ENST00000572083 SLC8A3P57103 927 aa20.67■□□□□ 0.9
CCDC40-206ENST00000572083 ZNF445P59923 1031 aa20.67■□□□□ 0.9
CCDC40-206ENST00000572083 GOLGA7BQ2TAP0 167 aa20.67■□□□□ 0.9
CCDC40-206ENST00000572083 ADGRF1Q5T601 910 aa20.67■□□□□ 0.9
CCDC40-206ENST00000572083 PM20D1Q6GTS8 502 aa20.67■□□□□ 0.9
CCDC40-206ENST00000572083 RFWD3Q6PCD5 774 aa20.67■□□□□ 0.9
CCDC40-206ENST00000572083 INTS8Q75QN2 995 aaKnown RBP20.67■□□□□ 0.9
CCDC40-206ENST00000572083 EID2Q8N6I1 236 aa20.67■□□□□ 0.9
CCDC40-206ENST00000572083 SAP25Q8TEE9 199 aa20.67■□□□□ 0.9
CCDC40-206ENST00000572083 PAGE5Q96GU1 130 aa20.67■□□□□ 0.9
CCDC40-206ENST00000572083 UBXN6Q9BZV1 441 aa20.67■□□□□ 0.9
CCDC40-206ENST00000572083 AASDHPPTQ9NRN7 309 aa20.67■□□□□ 0.9
CCDC40-206ENST00000572083 SUN2Q9UH99 717 aa20.67■□□□□ 0.9
CCDC40-206ENST00000572083 STOML2Q9UJZ1 356 aa20.67■□□□□ 0.9
CCDC40-206ENST00000572083 PTPRQQ9UMZ3 2332 aa20.67■□□□□ 0.9
CCDC40-206ENST00000572083 A0A1W2PP55 124 aa20.66■□□□□ 0.9
CCDC40-206ENST00000572083 MAPK13O15264 365 aa20.66■□□□□ 0.9
CCDC40-206ENST00000572083 MID1O15344 667 aa20.66■□□□□ 0.9
CCDC40-206ENST00000572083 RRP8O43159 456 aaKnown RBP20.66■□□□□ 0.9
CCDC40-206ENST00000572083 ACTN4O43707 911 aaKnown RBP20.66■□□□□ 0.9
CCDC40-206ENST00000572083 TBL1XO60907 577 aa20.66■□□□□ 0.9
CCDC40-206ENST00000572083 SIN3BO75182 1162 aa20.66■□□□□ 0.9
CCDC40-206ENST00000572083 KRT13P13646 458 aa20.66■□□□□ 0.9
CCDC40-206ENST00000572083 PLA2G2AP14555 144 aa20.66■□□□□ 0.9
CCDC40-206ENST00000572083 GALCP54803 685 aa20.66■□□□□ 0.9
CCDC40-206ENST00000572083 ADIGQ0VDE8 80 aa20.66■□□□□ 0.9
CCDC40-206ENST00000572083 ARHGAP17Q68EM7 881 aa20.66■□□□□ 0.9
CCDC40-206ENST00000572083 USP30Q70CQ3 517 aa20.66■□□□□ 0.9
CCDC40-206ENST00000572083 DHX40Q8IX18 779 aaKnown RBP20.66■□□□□ 0.9
CCDC40-206ENST00000572083 FAM186BQ8IYM0 893 aa20.66■□□□□ 0.9
CCDC40-206ENST00000572083 ANKRD52Q8NB46 1076 aa20.66■□□□□ 0.9
CCDC40-206ENST00000572083 SEMA4DQ92854 862 aa20.66■□□□□ 0.9
CCDC40-206ENST00000572083 MYO19Q96H55 970 aa20.66■□□□□ 0.9
CCDC40-206ENST00000572083 TMEM8AQ9HCN3 771 aa20.66■□□□□ 0.9
CCDC40-206ENST00000572083 TRAF3IP3Q9Y228 551 aa20.66■□□□□ 0.9
CCDC40-206ENST00000572083 MGAQ8IWI9 3026 aa20.66■□□□□ 0.9
CCDC40-206ENST00000572083 ZNF462Q96JM2 2506 aa20.65■□□□□ 0.9
CCDC40-206ENST00000572083 KNTC1P50748 2209 aa20.65■□□□□ 0.9
CCDC40-206ENST00000572083 YJEFN3A6XGL0 299 aa20.65■□□□□ 0.9
CCDC40-206ENST00000572083 E7ENQ6 273 aa20.65■□□□□ 0.9
CCDC40-206ENST00000572083 WNT9AO14904 365 aa20.65■□□□□ 0.9
CCDC40-206ENST00000572083 RNASEH2AO75792 299 aaKnown RBP20.65■□□□□ 0.9
CCDC40-206ENST00000572083 LATS1O95835 1130 aa20.65■□□□□ 0.9
CCDC40-206ENST00000572083 SLFN14P0C7P3 912 aa20.65■□□□□ 0.9
CCDC40-206ENST00000572083 CD38P28907 300 aa20.65■□□□□ 0.9
CCDC40-206ENST00000572083 EPHA8P29322 1005 aaPredicted RBP20.65■□□□□ 0.9
CCDC40-206ENST00000572083 BSPRYQ5W0U4 402 aa20.65■□□□□ 0.9
CCDC40-206ENST00000572083 TATDN2Q93075 761 aa20.65■□□□□ 0.9
CCDC40-206ENST00000572083 SKA1Q96BD8 255 aa20.65■□□□□ 0.9
CCDC40-206ENST00000572083 IPO9Q96P70 1041 aaKnown RBP20.65■□□□□ 0.9
CCDC40-206ENST00000572083 LRRC4Q9HBW1 653 aa20.65■□□□□ 0.9
CCDC40-206ENST00000572083 GDF3Q9NR23 364 aa20.65■□□□□ 0.9
CCDC40-206ENST00000572083 TSPAN16Q9UKR8 245 aa20.65■□□□□ 0.9
CCDC40-206ENST00000572083 SCML1Q9UN30 329 aa20.65■□□□□ 0.9
CCDC40-206ENST00000572083 MYLKQ15746 1914 aa20.65■□□□□ 0.9
CCDC40-206ENST00000572083 GOLGA6L7A0A1B0GV03 622 aa20.64■□□□□ 0.89
CCDC40-206ENST00000572083 C1SP09871 688 aa20.64■□□□□ 0.89
CCDC40-206ENST00000572083 ST8SIA6P61647 398 aa20.64■□□□□ 0.89
CCDC40-206ENST00000572083 KCNJ12Q14500 433 aa20.64■□□□□ 0.89
CCDC40-206ENST00000572083 CST6Q15828 149 aa20.64■□□□□ 0.89
CCDC40-206ENST00000572083 FBXL19Q6PCT2 694 aa20.64■□□□□ 0.89
CCDC40-206ENST00000572083 MFN1Q8IWA4 741 aa20.64■□□□□ 0.89
CCDC40-206ENST00000572083 ZNF843Q8N446 348 aa20.64■□□□□ 0.89
CCDC40-206ENST00000572083 BAP1Q92560 729 aa20.64■□□□□ 0.89
CCDC40-206ENST00000572083 NEUROG2Q9H2A3 272 aa20.64■□□□□ 0.89
CCDC40-206ENST00000572083 STIM2Q9P246 746 aa20.64■□□□□ 0.89
CCDC40-206ENST00000572083 LRRC72A6NJI9 287 aa20.63■□□□□ 0.89
CCDC40-206ENST00000572083 XPO1O14980 1071 aaKnown RBP20.63■□□□□ 0.89
CCDC40-206ENST00000572083 RNASEH1O60930 286 aaKnown RBP20.63■□□□□ 0.89
CCDC40-206ENST00000572083 CDK4P11802 303 aa20.63■□□□□ 0.89
CCDC40-206ENST00000572083 SLC6A4P31645 630 aa20.63■□□□□ 0.89
CCDC40-206ENST00000572083 RTP5Q14D33 572 aa20.63■□□□□ 0.89
CCDC40-206ENST00000572083 HNRNPA1L2Q32P51 320 aaKnown RBP20.63■□□□□ 0.89
CCDC40-206ENST00000572083 FAM133BQ5BKY9 247 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms