RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 SLC46A1Q96NT5 459 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 CLIC6Q96NY7 704 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 CGRRF1Q99675 332 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 EPN3Q9H201 632 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 GDF3Q9NR23 364 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 KCNG1Q9UIX4 513 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 NAGPAQ9UK23 515 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 SARDHQ9UL12 918 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 ENTPD2Q9Y5L3 495 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 FBN2P35556 2912 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 ABCA12Q86UK0 2595 aa7.53□□□□□ -1.2
SMG6-205ENST00000570659 CACNA1DQ01668 2161 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 BLACEA4D250 179 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 CAPN8A6NHC0 703 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 AGRPO00253 132 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 MSI1O43347 362 aaKnown RBP7.52□□□□□ -1.21
SMG6-205ENST00000570659 LATO43561 262 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 RNASEH2AO75792 299 aaKnown RBP7.52□□□□□ -1.21
SMG6-205ENST00000570659 GABBR2O75899 941 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 CD2BP2O95400 341 aaKnown RBP7.52□□□□□ -1.21
SMG6-205ENST00000570659 TNNC2P02585 160 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 ITGB2P05107 769 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 DGKAP23743 735 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 CASP1P29466 404 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 PLA2G4AP47712 749 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 PSMD8P48556 350 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 STK19P49842 368 aaPredicted RBP7.52□□□□□ -1.21
SMG6-205ENST00000570659 KIF11P52732 1056 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 ERVPABLB-1P60509 514 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 CYP24A1Q07973 514 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 ILKQ13418 452 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 CST6Q15828 149 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 DUOXA2Q1HG44 320 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 INAVAQ3KP66 663 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 FSCBQ5H9T9 825 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 C1orf220Q5T0J3 134 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 BROXQ5VW32 411 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 ZNF776Q68DI1 518 aaPredicted RBP7.52□□□□□ -1.21
SMG6-205ENST00000570659 GUSBP11Q6P575 273 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 FOXR1Q6PIV2 292 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 ZNF574Q6ZN55 896 aaPredicted RBP7.52□□□□□ -1.21
SMG6-205ENST00000570659 B3GNT8Q7Z7M8 397 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 VASH2Q86V25 355 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 SLC22A18ASQ8N1D0 253 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.52□□□□□ -1.21
SMG6-205ENST00000570659 DDI1Q8WTU0 396 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 KLK6Q92876 244 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 ARRDC3Q96B67 414 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 APOLD1Q96LR9 279 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 PRICKLE1Q96MT3 831 aaPredicted RBP7.52□□□□□ -1.21
SMG6-205ENST00000570659 PANK2Q9BZ23 570 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 FAM117AQ9C073 453 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 SGK2Q9HBY8 427 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 FZD3Q9NPG1 666 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 TLR8Q9NR97 1041 aaKnown RBP7.52□□□□□ -1.21
SMG6-205ENST00000570659 EHD2Q9NZN4 543 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 SLCO3A1Q9UIG8 710 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 KLF15Q9UIH9 416 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 GGA2Q9UJY4 613 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 LSM7Q9UK45 103 aaKnown RBP7.52□□□□□ -1.21
SMG6-205ENST00000570659 PNMA8BQ9ULN7 279 aaPredicted RBP7.52□□□□□ -1.21
SMG6-205ENST00000570659 SRPK3Q9UPE1 567 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 CSMD1Q96PZ7 3565 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 DOPEY1Q5JWR5 2465 aa7.52□□□□□ -1.21
SMG6-205ENST00000570659 CREBBPQ92793 2442 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 SPTBN1Q01082 2364 aaKnown RBP7.51□□□□□ -1.21
SMG6-205ENST00000570659 SLC12A8A0AV02 714 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 AFPP02771 609 aaKnown RBP7.51□□□□□ -1.21
SMG6-205ENST00000570659 DNTTP04053 509 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 PABPC1P11940 636 aaKnown RBP7.51□□□□□ -1.21
SMG6-205ENST00000570659 CKMT1AP12532 417 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 HGFP14210 728 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 PRLRP16471 622 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 UBA7P41226 1012 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 ASPAP45381 313 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 CYP2J2P51589 502 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 ZNF132P52740 706 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 UCNP55089 124 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 TAS2R38P59533 333 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 ANAPC15P60006 121 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 TNNC1P63316 161 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 ZNF211Q13398 564 aaPredicted RBP7.51□□□□□ -1.21
SMG6-205ENST00000570659 PSMD6Q15008 389 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 EIF4HQ15056 248 aaKnown RBP7.51□□□□□ -1.21
SMG6-205ENST00000570659 SNRNP35Q16560 246 aaKnown RBP7.51□□□□□ -1.21
SMG6-205ENST00000570659 TBR1Q16650 682 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 C4orf17Q53FE4 359 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 MCTP1Q6DN14 999 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 NADSYN1Q6IA69 706 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 KLHDC10Q6PID8 442 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 CCDC81Q6ZN84 652 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 ATG14Q6ZNE5 492 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 EPM2AIP1Q7L775 607 aaPredicted RBP7.51□□□□□ -1.21
SMG6-205ENST00000570659 SYCP3Q8IZU3 236 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 CRYBG2Q8N1P7 616 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 STK40Q8N2I9 435 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 CPXM2Q8N436 756 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 OR2T34Q8NGX1 318 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 OR4C6Q8NH72 309 aa7.51□□□□□ -1.21
SMG6-205ENST00000570659 GANCQ8TET4 914 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms