RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 DNTTP04053 509 aa13.64□□□□□ -0.23
SPG7-221ENST00000569720 ZNF883P0CG24 379 aa13.64□□□□□ -0.23
SPG7-221ENST00000569720 BRD2P25440 801 aaKnown RBP13.64□□□□□ -0.23
SPG7-221ENST00000569720 MATKP42679 507 aa13.64□□□□□ -0.23
SPG7-221ENST00000569720 ST8SIA6P61647 398 aa13.64□□□□□ -0.23
SPG7-221ENST00000569720 FAM193AP78312 1265 aa13.64□□□□□ -0.23
SPG7-221ENST00000569720 GCNT1Q02742 428 aa13.64□□□□□ -0.23
SPG7-221ENST00000569720 SFSWAPQ12872 951 aaKnown RBP13.64□□□□□ -0.23
SPG7-221ENST00000569720 TTC31Q49AM3 519 aaPredicted RBP13.64□□□□□ -0.23
SPG7-221ENST00000569720 CCDC183Q5T5S1 534 aa13.64□□□□□ -0.23
SPG7-221ENST00000569720 PIK3R6Q5UE93 754 aa13.64□□□□□ -0.23
SPG7-221ENST00000569720 RFWD3Q6PCD5 774 aa13.64□□□□□ -0.23
SPG7-221ENST00000569720 ADIPOR2Q86V24 386 aa13.64□□□□□ -0.23
SPG7-221ENST00000569720 MFN1Q8IWA4 741 aa13.64□□□□□ -0.23
SPG7-221ENST00000569720 CHCHD4Q8N4Q1 142 aa13.64□□□□□ -0.23
SPG7-221ENST00000569720 ZNF366Q8N895 744 aa13.64□□□□□ -0.23
SPG7-221ENST00000569720 HJURPQ8NCD3 748 aaPredicted RBP13.64□□□□□ -0.23
SPG7-221ENST00000569720 GPT2Q8TD30 523 aa13.64□□□□□ -0.23
SPG7-221ENST00000569720 SETD7Q8WTS6 366 aaKnown RBP13.64□□□□□ -0.23
SPG7-221ENST00000569720 ZCCHC14Q8WYQ9 949 aaKnown RBP13.64□□□□□ -0.23
SPG7-221ENST00000569720 CAMK1GQ96NX5 476 aa13.64□□□□□ -0.23
SPG7-221ENST00000569720 SERPINB11Q96P15 392 aa13.64□□□□□ -0.23
SPG7-221ENST00000569720 BTBD1Q9H0C5 482 aa13.64□□□□□ -0.23
SPG7-221ENST00000569720 CLSTN2Q9H4D0 955 aa13.64□□□□□ -0.23
SPG7-221ENST00000569720 GAREM1Q9H706 876 aa13.64□□□□□ -0.23
SPG7-221ENST00000569720 MAN1B1Q9UKM7 699 aa13.64□□□□□ -0.23
SPG7-221ENST00000569720 CD44P16070 742 aaKnown RBP13.63□□□□□ -0.23
SPG7-221ENST00000569720 ACADSBP45954 432 aa13.63□□□□□ -0.23
SPG7-221ENST00000569720 SGSHP51688 502 aa13.63□□□□□ -0.23
SPG7-221ENST00000569720 AFF3P51826 1226 aaKnown RBP13.63□□□□□ -0.23
SPG7-221ENST00000569720 SUZ12Q15022 739 aaKnown RBP13.63□□□□□ -0.23
SPG7-221ENST00000569720 TEAD4Q15561 434 aa13.63□□□□□ -0.23
SPG7-221ENST00000569720 ZNF776Q68DI1 518 aaPredicted RBP13.63□□□□□ -0.23
SPG7-221ENST00000569720 FOXR2Q6PJQ5 311 aa13.63□□□□□ -0.23
SPG7-221ENST00000569720 RRAGAQ7L523 313 aa13.63□□□□□ -0.23
SPG7-221ENST00000569720 RAB44Q7Z6P3 723 aaPredicted RBP13.63□□□□□ -0.23
SPG7-221ENST00000569720 EHBP1Q8NDI1 1231 aa13.63□□□□□ -0.23
SPG7-221ENST00000569720 NELFBQ8WX92 580 aa13.63□□□□□ -0.23
SPG7-221ENST00000569720 KAT5Q92993 513 aa13.63□□□□□ -0.23
SPG7-221ENST00000569720 FAM149B1Q96BN6 582 aa13.63□□□□□ -0.23
SPG7-221ENST00000569720 TRIM62Q9BVG3 475 aa13.63□□□□□ -0.23
SPG7-221ENST00000569720 MIS12Q9H081 205 aa13.63□□□□□ -0.23
SPG7-221ENST00000569720 NUP62CLQ9H1M0 184 aa13.63□□□□□ -0.23
SPG7-221ENST00000569720 SGK2Q9HBY8 427 aa13.63□□□□□ -0.23
SPG7-221ENST00000569720 PRSS16Q9NQE7 514 aa13.63□□□□□ -0.23
SPG7-221ENST00000569720 ST7Q9NRC1 585 aa13.63□□□□□ -0.23
SPG7-221ENST00000569720 STIM2Q9P246 746 aa13.63□□□□□ -0.23
SPG7-221ENST00000569720 APOBEC2Q9Y235 224 aaKnown RBP13.63□□□□□ -0.23
SPG7-221ENST00000569720 NCKAP1Q9Y2A7 1128 aa13.63□□□□□ -0.23
SPG7-221ENST00000569720 TMEM131Q92545 1883 aa13.62□□□□□ -0.23
SPG7-221ENST00000569720 GOLGA6L7A0A1B0GV03 622 aa13.62□□□□□ -0.23
SPG7-221ENST00000569720 FAM221BA6H8Z2 402 aa13.62□□□□□ -0.23
SPG7-221ENST00000569720 CAPN9O14815 690 aa13.62□□□□□ -0.23
SPG7-221ENST00000569720 RNASEH1O60930 286 aaKnown RBP13.62□□□□□ -0.23
SPG7-221ENST00000569720 SEMA4FO95754 770 aa13.62□□□□□ -0.23
SPG7-221ENST00000569720 ASLP04424 464 aa13.62□□□□□ -0.23
SPG7-221ENST00000569720 FTH1P19P0C7X4 201 aa13.62□□□□□ -0.23
SPG7-221ENST00000569720 C7P10643 843 aa13.62□□□□□ -0.23
SPG7-221ENST00000569720 SLC6A4P31645 630 aa13.62□□□□□ -0.23
SPG7-221ENST00000569720 CD70P32970 193 aa13.62□□□□□ -0.23
SPG7-221ENST00000569720 ACSL1P33121 698 aa13.62□□□□□ -0.23
SPG7-221ENST00000569720 RPS14P62263 151 aaKnown RBP13.62□□□□□ -0.23
SPG7-221ENST00000569720 KCNH2Q12809 1159 aa13.62□□□□□ -0.23
SPG7-221ENST00000569720 NNTQ13423 1086 aa13.62□□□□□ -0.23
SPG7-221ENST00000569720 PTPRNQ16849 979 aa13.62□□□□□ -0.23
SPG7-221ENST00000569720 HLA-BQ31612 363 aa13.62□□□□□ -0.23
SPG7-221ENST00000569720 FAM133BQ5BKY9 247 aaKnown RBP13.62□□□□□ -0.23
SPG7-221ENST00000569720 CT47A1Q5JQC4 288 aaPredicted RBP13.62□□□□□ -0.23
SPG7-221ENST00000569720 TTI2Q6NXR4 508 aa13.62□□□□□ -0.23
SPG7-221ENST00000569720 RBM43Q6ZSC3 357 aaKnown RBP13.62□□□□□ -0.23
SPG7-221ENST00000569720 FIBINQ8TAL6 211 aa13.62□□□□□ -0.23
SPG7-221ENST00000569720 LMO3Q8TAP4 145 aa13.62□□□□□ -0.23
SPG7-221ENST00000569720 DQX1Q8TE96 717 aaKnown RBP13.62□□□□□ -0.23
SPG7-221ENST00000569720 CLEC4CQ8WTT0 213 aa13.62□□□□□ -0.23
SPG7-221ENST00000569720 ADAMTS14Q8WXS8 1223 aa13.62□□□□□ -0.23
SPG7-221ENST00000569720 ZSWIM1Q9BR11 485 aa13.62□□□□□ -0.23
SPG7-221ENST00000569720 C6orf106Q9H6K1 298 aaPredicted RBP13.62□□□□□ -0.23
SPG7-221ENST00000569720 TM7SF3Q9NS93 570 aa13.62□□□□□ -0.23
SPG7-221ENST00000569720 SCML1Q9UN30 329 aa13.62□□□□□ -0.23
SPG7-221ENST00000569720 TLR6Q9Y2C9 796 aa13.62□□□□□ -0.23
SPG7-221ENST00000569720 PCDHGB2Q9Y5G2 931 aa13.62□□□□□ -0.23
SPG7-221ENST00000569720 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.62□□□□□ -0.23
SPG7-221ENST00000569720 KNL1Q8NG31 2342 aa13.62□□□□□ -0.23
SPG7-221ENST00000569720 ZZEF1O43149 2961 aa13.61□□□□□ -0.23
SPG7-221ENST00000569720 A0A1B0GVT2 93 aa13.61□□□□□ -0.23
SPG7-221ENST00000569720 PPP1R3GB7ZBB8 358 aa13.61□□□□□ -0.23
SPG7-221ENST00000569720 MED7O43513 233 aa13.61□□□□□ -0.23
SPG7-221ENST00000569720 GABBR2O75899 941 aa13.61□□□□□ -0.23
SPG7-221ENST00000569720 MOCS3O95396 460 aa13.61□□□□□ -0.23
SPG7-221ENST00000569720 APOEP02649 317 aa13.61□□□□□ -0.23
SPG7-221ENST00000569720 AFPP02771 609 aaKnown RBP13.61□□□□□ -0.23
SPG7-221ENST00000569720 KRT5P13647 590 aa13.61□□□□□ -0.23
SPG7-221ENST00000569720 CSNK1EP49674 416 aaKnown RBP13.61□□□□□ -0.23
SPG7-221ENST00000569720 CDH18Q13634 790 aa13.61□□□□□ -0.23
SPG7-221ENST00000569720 ARHGEF19Q8IW93 802 aa13.61□□□□□ -0.23
SPG7-221ENST00000569720 TRIM59Q8IWR1 403 aa13.61□□□□□ -0.23
SPG7-221ENST00000569720 SCUBE3Q8IX30 993 aa13.61□□□□□ -0.23
SPG7-221ENST00000569720 CARNMT1Q8N4J0 409 aa13.61□□□□□ -0.23
SPG7-221ENST00000569720 C1orf216Q8TAB5 229 aa13.61□□□□□ -0.23
SPG7-221ENST00000569720 WFDC5Q8TCV5 224 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms