RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 MAGEA11P43364 429 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 PPP3CCP48454 512 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 CCT8P50990 548 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 AFF3P51826 1226 aaKnown RBP6.25□□□□□ -1.41
CDH13-212ENST00000569144 UCNP55089 124 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 RPS26P62854 115 aaKnown RBP6.25□□□□□ -1.41
CDH13-212ENST00000569144 MYL7Q01449 175 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 CCDC173Q0VFZ6 552 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 ORC2Q13416 577 aaPredicted RBP6.25□□□□□ -1.41
CDH13-212ENST00000569144 LY6DQ14210 128 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 SF3A1Q15459 793 aaKnown RBP6.25□□□□□ -1.41
CDH13-212ENST00000569144 EGFLAMQ63HQ2 1017 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 SCARA3Q6AZY7 606 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 RINT1Q6NUQ1 792 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 KIAA1324Q6UXG2 1013 aaKnown RBP6.25□□□□□ -1.41
CDH13-212ENST00000569144 C1orf186Q6ZWK4 172 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 SPATA2LQ8IUW3 424 aaPredicted RBP6.25□□□□□ -1.41
CDH13-212ENST00000569144 SCN4BQ8IWT1 228 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 DIS3L2Q8IYB7 885 aaKnown RBP6.25□□□□□ -1.41
CDH13-212ENST00000569144 PDCL2Q8N4E4 241 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 NAT16Q8N8M0 369 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 KCNN1Q92952 543 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 GAL3ST3Q96A11 431 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 BICD1Q96G01 975 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 SPATA17Q96L03 361 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 CEP295NLQ96MC4 621 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 ZNF560Q96MR9 790 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 ACOX2Q99424 681 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 GPR174Q9BXC1 333 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 RNF38Q9H0F5 515 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 SLC6A17Q9H1V8 727 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 ASB7Q9H672 318 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 ITM2CQ9NQX7 267 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 SMPD4Q9NXE4 827 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 DDX43Q9NXZ2 648 aaKnown RBP6.25□□□□□ -1.41
CDH13-212ENST00000569144 DPP3Q9NY33 737 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 USP36Q9P275 1121 aaKnown RBP6.25□□□□□ -1.41
CDH13-212ENST00000569144 CFAP97Q9P2B7 532 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 ORC3Q9UBD5 711 aaPredicted RBP6.25□□□□□ -1.41
CDH13-212ENST00000569144 CPSF3Q9UKF6 684 aaKnown RBP6.25□□□□□ -1.41
CDH13-212ENST00000569144 GTF3C4Q9UKN8 822 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 PCDHB6Q9Y5E3 794 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 RAD54BQ9Y620 910 aa6.25□□□□□ -1.41
CDH13-212ENST00000569144 ZNF638Q14966 1978 aaKnown RBP6.25□□□□□ -1.41
CDH13-212ENST00000569144 ATMQ13315 3056 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 A0A0B4J269 797 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 ZNF840PA6NDX5 716 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 E9PMD0 336 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 H0YCG3 227 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 HNRNPDLO14979 420 aaKnown RBP6.24□□□□□ -1.41
CDH13-212ENST00000569144 PAPSS1O43252 624 aaPredicted RBP6.24□□□□□ -1.41
CDH13-212ENST00000569144 BRINP1O60477 761 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 OAS1P00973 400 aaKnown RBP6.24□□□□□ -1.41
CDH13-212ENST00000569144 PIGRP01833 764 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 ACAT1P24752 427 aaKnown RBP6.24□□□□□ -1.41
CDH13-212ENST00000569144 PNPLA4P41247 253 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 CSNK1EP49674 416 aaKnown RBP6.24□□□□□ -1.41
CDH13-212ENST00000569144 LIG4P49917 911 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 NCKAP1LP55160 1127 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 TMPRSS3P57727 454 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 TARDBPQ13148 414 aaKnown RBP eCLIP6.24□□□□□ -1.41
CDH13-212ENST00000569144 SEPT6Q14141 434 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 KIF19Q2TAC6 998 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 TBC1D25Q3MII6 688 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 COLEC12Q5KU26 742 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 HES3Q5TGS1 186 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 BROXQ5VW32 411 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 GRAMD4Q6IC98 578 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 VSTM1Q6UX27 236 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 DENND5BQ6ZUT9 1274 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 ERICH1Q86X53 443 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 SMYD4Q8IYR2 804 aaPredicted RBP6.24□□□□□ -1.41
CDH13-212ENST00000569144 TMEM86AQ8N2M4 240 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 ZNF248Q8NDW4 579 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 IGSF8Q969P0 613 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 ERLEC1Q96DZ1 483 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 MED8Q96G25 268 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 LGMNQ99538 433 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 MSTO1Q9BUK6 570 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 TTLL2Q9BWV7 592 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 PCED1AQ9H1Q7 454 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 SPHK2Q9NRA0 654 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 EHD2Q9NZN4 543 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 LRWD1Q9UFC0 647 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 IL17BQ9UHF5 180 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 EIF2B4Q9UI10 523 aaKnown RBP6.24□□□□□ -1.41
CDH13-212ENST00000569144 L1RE1Q9UN81 338 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 DNM3Q9UQ16 869 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 TLR6Q9Y2C9 796 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 SNX11Q9Y5W9 270 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 CYP46A1Q9Y6A2 500 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 UNC79Q9P2D8 2635 aa6.24□□□□□ -1.41
CDH13-212ENST00000569144 GON4LQ3T8J9 2241 aa6.23□□□□□ -1.41
CDH13-212ENST00000569144 KCNJ18B7U540 433 aa6.23□□□□□ -1.41
CDH13-212ENST00000569144 PRRT4C9JH25 899 aa6.23□□□□□ -1.41
CDH13-212ENST00000569144 TRIM24O15164 1050 aa6.23□□□□□ -1.41
CDH13-212ENST00000569144 PFKFB2O60825 505 aa6.23□□□□□ -1.41
CDH13-212ENST00000569144 HUS1O60921 280 aa6.23□□□□□ -1.41
CDH13-212ENST00000569144 DTNBO60941 627 aa6.23□□□□□ -1.41
CDH13-212ENST00000569144 CTDNEP1O95476 244 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms