RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 TATDN2Q93075 761 aa12.06□□□□□ -0.48
SNAPC5-208ENST00000568875 SLC22A12Q96S37 553 aa12.06□□□□□ -0.48
SNAPC5-208ENST00000568875 NELL2Q99435 816 aa12.06□□□□□ -0.48
SNAPC5-208ENST00000568875 OSBPL6Q9BZF3 934 aa12.06□□□□□ -0.48
SNAPC5-208ENST00000568875 CSNK1G1Q9HCP0 422 aa12.06□□□□□ -0.48
SNAPC5-208ENST00000568875 IL37Q9NZH6 218 aa12.06□□□□□ -0.48
SNAPC5-208ENST00000568875 CNOT8Q9UFF9 292 aaKnown RBP12.06□□□□□ -0.48
SNAPC5-208ENST00000568875 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.06□□□□□ -0.48
SNAPC5-208ENST00000568875 C2orf78A6NCI8 922 aa12.05□□□□□ -0.48
SNAPC5-208ENST00000568875 ZNF840PA6NDX5 716 aa12.05□□□□□ -0.48
SNAPC5-208ENST00000568875 FAM170BA6NMN3 283 aa12.05□□□□□ -0.48
SNAPC5-208ENST00000568875 ECEL1O95672 775 aa12.05□□□□□ -0.48
SNAPC5-208ENST00000568875 RARAP10276 462 aa12.05□□□□□ -0.48
SNAPC5-208ENST00000568875 CCDC130P13994 396 aa12.05□□□□□ -0.48
SNAPC5-208ENST00000568875 ITIH2P19823 946 aa12.05□□□□□ -0.48
SNAPC5-208ENST00000568875 ZNF268Q14587 947 aaPredicted RBP12.05□□□□□ -0.48
SNAPC5-208ENST00000568875 ERMARDQ5T6L9 678 aa12.05□□□□□ -0.48
SNAPC5-208ENST00000568875 TTC27Q6P3X3 843 aa12.05□□□□□ -0.48
SNAPC5-208ENST00000568875 ZNF852Q6ZMS4 543 aa12.05□□□□□ -0.48
SNAPC5-208ENST00000568875 TPRG1Q6ZUI0 275 aa12.05□□□□□ -0.48
SNAPC5-208ENST00000568875 ZNF687Q8N1G0 1237 aa12.05□□□□□ -0.48
SNAPC5-208ENST00000568875 ZMIZ2Q8NF64 920 aa12.05□□□□□ -0.48
SNAPC5-208ENST00000568875 SLC2A14Q8TDB8 520 aa12.05□□□□□ -0.48
SNAPC5-208ENST00000568875 CYFIP2Q96F07 1278 aa12.05□□□□□ -0.48
SNAPC5-208ENST00000568875 SMARCD1Q96GM5 515 aa12.05□□□□□ -0.48
SNAPC5-208ENST00000568875 HNRNPABQ99729 332 aaKnown RBP12.05□□□□□ -0.48
SNAPC5-208ENST00000568875 NT5C1AQ9BXI3 368 aa12.05□□□□□ -0.48
SNAPC5-208ENST00000568875 TRIM31Q9BZY9 425 aa12.05□□□□□ -0.48
SNAPC5-208ENST00000568875 LTB4R2Q9NPC1 389 aa12.05□□□□□ -0.48
SNAPC5-208ENST00000568875 BCCIPQ9P287 314 aaKnown RBP eCLIP12.05□□□□□ -0.48
SNAPC5-208ENST00000568875 ZFHX2Q9C0A1 2572 aaPredicted RBP12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 TMEM110-MUSTN1A8MSY1 372 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 H0Y858 1186 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 MAN2B1O00754 1011 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 AP1G2O75843 785 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 BEST1O76090 585 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 HDCP19113 662 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 CD58P19256 250 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 MMP13P45452 471 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 PPP3CCP48454 512 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 MARCKSL1P49006 195 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 SEC24CP53992 1094 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 TAF10Q12962 218 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 CALCOCO2Q13137 446 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 WDR44Q5JSH3 913 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 ADAT2Q7Z6V5 191 aaKnown RBP12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 MCOLN2Q8IZK6 566 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 ARL14EPQ8N8R7 260 aaPredicted RBP12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 SCAMP5Q8TAC9 235 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 RIN3Q8TB24 985 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 GRK7Q8WTQ7 553 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 RAPGEF5Q92565 580 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 CLDN23Q96B33 292 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 RNF25Q96BH1 459 aaPredicted RBP12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 ZFYVE19Q96K21 471 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 SMOQ99835 787 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 FAM83CQ9BQN1 747 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 MED10Q9BTT4 135 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 FAM124BQ9H5Z6 455 aaPredicted RBP12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 CCDC134Q9H6E4 229 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 ACTR5Q9H9F9 607 aaPredicted RBP12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 DMAP1Q9NPF5 467 aaPredicted RBP12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 GKN1Q9NS71 199 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 CISHQ9NSE2 258 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 TRPM5Q9NZQ8 1165 aa12.04□□□□□ -0.48
SNAPC5-208ENST00000568875 TICRRQ7Z2Z1 1910 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 TRAV19A0A0A6YYK7 116 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 FAM92AA1XBS5 289 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 RTN3O95197 1032 aaPredicted RBP12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 CYP1A1P04798 512 aaPredicted RBP12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 USP17L7P0C7H9 530 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 PFKLP17858 780 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 TARSP26639 723 aaKnown RBP12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 YWHAQP27348 245 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 CENPCQ03188 943 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 SLC29A2Q14542 456 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 UBXN2BQ14CS0 331 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 SKIDA1Q1XH10 827 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 CEP128Q6ZU80 1094 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 TTC39CQ8N584 583 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 RNF38Q9H0F5 515 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 IRF2BPLQ9H1B7 796 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 KIF9Q9HAQ2 790 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 TRPC7Q9HCX4 862 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 PPANQ9NQ55 473 aaKnown RBP12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 FAM49BQ9NUQ9 324 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 THG1LQ9NWX6 298 aaKnown RBP12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 COMMD8Q9NX08 183 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 GTSE1Q9NYZ3 720 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 CNTN6Q9UQ52 1028 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 PIAS3Q9Y6X2 628 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 COL4A2P08572 1712 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 RGS16O15492 202 aaPredicted RBP12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 RIPK2O43353 540 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 ZXDBP98169 803 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 TNK2Q07912 1038 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 SNX30Q5VWJ9 437 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 AADACL2Q6P093 401 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 PACS2Q86VP3 889 aa12.03□□□□□ -0.48
SNAPC5-208ENST00000568875 BBOF1Q8ND07 529 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms