RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 SPDYAQ5MJ70 313 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 FAM83BQ5T0W9 1011 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 SYDE2Q5VT97 1194 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 BROXQ5VW32 411 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 ALS2CLQ60I27 953 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 NCAPH2Q6IBW4 605 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 SLC39A5Q6ZMH5 540 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 IFT20Q8IY31 132 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 NOA1Q8NC60 698 aaKnown RBP5.65□□□□□ -1.5
CAPN3-217ENST00000567817 C1orf131Q8NDD1 294 aaKnown RBP5.65□□□□□ -1.5
CAPN3-217ENST00000567817 SPATA4Q8NEY3 305 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 ETNPPLQ8TBG4 499 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 LRRC15Q8TF66 581 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 CHAC2Q8WUX2 184 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 SCFD1Q8WVM8 642 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 USP6NLQ92738 828 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 OSBPL9Q96SU4 736 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 GPHA2Q96T91 129 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 TTC1Q99614 292 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 SOX7Q9BT81 388 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 KCTD10Q9H3F6 313 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 CPVLQ9H3G5 476 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 PDE11AQ9HCR9 933 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 DDX4Q9NQI0 724 aaKnown RBP5.65□□□□□ -1.5
CAPN3-217ENST00000567817 MAP3K20Q9NYL2 800 aaKnown RBP5.65□□□□□ -1.5
CAPN3-217ENST00000567817 ODF2LQ9ULJ1 636 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 DOCK1Q14185 1865 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 GOLGA6BA6NDN3 693 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 CCDC188H7C350 402 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 MEIS2O14770 477 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 POLR3GO15318 223 aaPredicted RBP5.64□□□□□ -1.51
CAPN3-217ENST00000567817 P4HA2O15460 535 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 EDIL3O43854 480 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 NRP2O60462 931 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 N4BP1O75113 896 aaKnown RBP5.64□□□□□ -1.51
CAPN3-217ENST00000567817 ULK1O75385 1050 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 TOX4O94842 621 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 EYA4O95677 639 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 NDUFB10O96000 172 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 CLTBP09497 229 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 HOXC6P09630 235 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 ALADP13716 330 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 FERP16591 822 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 POU3F3P20264 500 aaPredicted RBP5.64□□□□□ -1.51
CAPN3-217ENST00000567817 CCND3P30281 292 aaPredicted RBP5.64□□□□□ -1.51
CAPN3-217ENST00000567817 ABCD1P33897 745 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 ACTN2P35609 894 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 STAT2P52630 851 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 NAP1L1P55209 391 aaKnown RBP5.64□□□□□ -1.51
CAPN3-217ENST00000567817 NPEPPSP55786 919 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 CCNA1P78396 465 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 IRX3P78415 501 aaPredicted RBP5.64□□□□□ -1.51
CAPN3-217ENST00000567817 NHLH1Q02575 133 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 HHEXQ03014 270 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 KLHL30Q0D2K2 578 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 CETN1Q12798 172 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 PPP2R5CQ13362 524 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 NAB2Q15742 525 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 UBE2SQ16763 222 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 EXOC3L4Q17RC7 722 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 PRR16Q569H4 304 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 C8orf74Q6P047 294 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 PSRC1Q6PGN9 363 aaPredicted RBP5.64□□□□□ -1.51
CAPN3-217ENST00000567817 CCNI2Q6ZMN8 369 aaPredicted RBP5.64□□□□□ -1.51
CAPN3-217ENST00000567817 EPM2AIP1Q7L775 607 aaPredicted RBP5.64□□□□□ -1.51
CAPN3-217ENST00000567817 SPRED1Q7Z699 444 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 FAM160B2Q86V87 743 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 RASSF3Q86WH2 238 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 CATSPER3Q86XQ3 398 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 UNC5BQ8IZJ1 945 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 D2HGDHQ8N465 521 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 ZNF808Q8N4W9 903 aaPredicted RBP5.64□□□□□ -1.51
CAPN3-217ENST00000567817 AENQ8WTP8 325 aaKnown RBP5.64□□□□□ -1.51
CAPN3-217ENST00000567817 CHURC1Q8WUH1 139 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 RSAD2Q8WXG1 361 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 PPM1EQ8WY54 764 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 TAF4BQ92750 862 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 CAVIN3Q969G5 261 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 PBKQ96KB5 322 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 RPL10LQ96L21 214 aaKnown RBP5.64□□□□□ -1.51
CAPN3-217ENST00000567817 SPAG5Q96R06 1193 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 UIMC1Q96RL1 719 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 IWS1Q96ST2 819 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 RUFY1Q96T51 708 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 MMS19Q96T76 1030 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 PRRX2Q99811 253 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 SELENOOQ9BVL4 669 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 TIPINQ9BVW5 301 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 LSM14BQ9BX40 385 aaKnown RBP5.64□□□□□ -1.51
CAPN3-217ENST00000567817 MS4A5Q9H3V2 200 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 EPHX3Q9H6B9 360 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 AS3MTQ9HBK9 375 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 IL23AQ9NPF7 189 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 VPS18Q9P253 973 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 TRIM10Q9UDY6 481 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 ADAM21Q9UKJ8 722 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 MRPL11Q9Y3B7 192 aaKnown RBP5.64□□□□□ -1.51
CAPN3-217ENST00000567817 NUMBLQ9Y6R0 609 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 RLFQ13129 1914 aa5.64□□□□□ -1.51
CAPN3-217ENST00000567817 ZDBF2Q9HCK1 2354 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms