RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 TMEM245Q9H330 911 aa19.33■□□□□ 0.68
LINC01238-205ENST00000567549 CHMP5Q9NZZ3 219 aa19.33■□□□□ 0.68
LINC01238-205ENST00000567549 TPX2Q9ULW0 747 aaKnown RBP19.33■□□□□ 0.68
LINC01238-205ENST00000567549 CTNND2Q9UQB3 1225 aa19.33■□□□□ 0.68
LINC01238-205ENST00000567549 MSRB2Q9Y3D2 182 aa19.33■□□□□ 0.68
LINC01238-205ENST00000567549 CD59P13987 128 aa19.32■□□□□ 0.68
LINC01238-205ENST00000567549 PRKCSHP14314 528 aaPredicted RBP19.32■□□□□ 0.68
LINC01238-205ENST00000567549 NNMTP40261 264 aa19.32■□□□□ 0.68
LINC01238-205ENST00000567549 INAVAQ3KP66 663 aa19.32■□□□□ 0.68
LINC01238-205ENST00000567549 LRSAM1Q6UWE0 723 aa19.32■□□□□ 0.68
LINC01238-205ENST00000567549 TRIM59Q8IWR1 403 aa19.32■□□□□ 0.68
LINC01238-205ENST00000567549 FIBINQ8TAL6 211 aa19.32■□□□□ 0.68
LINC01238-205ENST00000567549 SORCS1Q8WY21 1168 aa19.32■□□□□ 0.68
LINC01238-205ENST00000567549 SNX19Q92543 992 aa19.32■□□□□ 0.68
LINC01238-205ENST00000567549 ERCC4Q92889 916 aaPredicted RBP19.32■□□□□ 0.68
LINC01238-205ENST00000567549 MIS12Q9H081 205 aa19.32■□□□□ 0.68
LINC01238-205ENST00000567549 OSGEPQ9NPF4 335 aa19.32■□□□□ 0.68
LINC01238-205ENST00000567549 FSCN3Q9NQT6 498 aa19.32■□□□□ 0.68
LINC01238-205ENST00000567549 TJP2Q9UDY2 1190 aa19.32■□□□□ 0.68
LINC01238-205ENST00000567549 CLEC4EQ9ULY5 219 aa19.32■□□□□ 0.68
LINC01238-205ENST00000567549 WASF3Q9UPY6 502 aa19.32■□□□□ 0.68
LINC01238-205ENST00000567549 PCDHGB2Q9Y5G2 931 aa19.32■□□□□ 0.68
LINC01238-205ENST00000567549 SPAARA0A1B0GVQ0 90 aa19.31■□□□□ 0.68
LINC01238-205ENST00000567549 C1QTNF9BB2RNN3 333 aa19.31■□□□□ 0.68
LINC01238-205ENST00000567549 KCNJ18B7U540 433 aa19.31■□□□□ 0.68
LINC01238-205ENST00000567549 C1QTNF9P0C862 333 aa19.31■□□□□ 0.68
LINC01238-205ENST00000567549 C7P10643 843 aa19.31■□□□□ 0.68
LINC01238-205ENST00000567549 SLC2A3P11169 496 aa19.31■□□□□ 0.68
LINC01238-205ENST00000567549 MAOBP27338 520 aa19.31■□□□□ 0.68
LINC01238-205ENST00000567549 OXCT1P55809 520 aa19.31■□□□□ 0.68
LINC01238-205ENST00000567549 MORC3Q14149 939 aa19.31■□□□□ 0.68
LINC01238-205ENST00000567549 RNF219Q5W0B1 726 aaPredicted RBP19.31■□□□□ 0.68
LINC01238-205ENST00000567549 TMEM215Q68D42 235 aa19.31■□□□□ 0.68
LINC01238-205ENST00000567549 ISM2Q6H9L7 571 aa19.31■□□□□ 0.68
LINC01238-205ENST00000567549 USP30Q70CQ3 517 aa19.31■□□□□ 0.68
LINC01238-205ENST00000567549 RRAGAQ7L523 313 aa19.31■□□□□ 0.68
LINC01238-205ENST00000567549 ADIPOR2Q86V24 386 aa19.31■□□□□ 0.68
LINC01238-205ENST00000567549 CDC6Q99741 560 aa19.31■□□□□ 0.68
LINC01238-205ENST00000567549 GAREM1Q9H706 876 aa19.31■□□□□ 0.68
LINC01238-205ENST00000567549 CD93Q9NPY3 652 aa19.31■□□□□ 0.68
LINC01238-205ENST00000567549 EIF2B4Q9UI10 523 aaKnown RBP19.31■□□□□ 0.68
LINC01238-205ENST00000567549 CEP295Q9C0D2 2601 aa19.3■□□□□ 0.68
LINC01238-205ENST00000567549 FLRT2O43155 660 aa19.3■□□□□ 0.68
LINC01238-205ENST00000567549 HYAL3O43820 417 aaPredicted RBP19.3■□□□□ 0.68
LINC01238-205ENST00000567549 DFNA5O60443 496 aa19.3■□□□□ 0.68
LINC01238-205ENST00000567549 GJB3O75712 270 aa19.3■□□□□ 0.68
LINC01238-205ENST00000567549 SEMA4FO95754 770 aa19.3■□□□□ 0.68
LINC01238-205ENST00000567549 HLA-EP13747 358 aa19.3■□□□□ 0.68
LINC01238-205ENST00000567549 TTC39BQ5VTQ0 682 aaPredicted RBP19.3■□□□□ 0.68
LINC01238-205ENST00000567549 FAM124AQ86V42 546 aa19.3■□□□□ 0.68
LINC01238-205ENST00000567549 CACUL1Q86Y37 369 aa19.3■□□□□ 0.68
LINC01238-205ENST00000567549 LMO3Q8TAP4 145 aa19.3■□□□□ 0.68
LINC01238-205ENST00000567549 GANCQ8TET4 914 aa19.3■□□□□ 0.68
LINC01238-205ENST00000567549 CYB5D2Q8WUJ1 264 aa19.3■□□□□ 0.68
LINC01238-205ENST00000567549 P2RY11Q96G91 374 aa19.3■□□□□ 0.68
LINC01238-205ENST00000567549 NOX5Q96PH1 765 aa19.3■□□□□ 0.68
LINC01238-205ENST00000567549 INTS2Q9H0H0 1204 aaKnown RBP19.3■□□□□ 0.68
LINC01238-205ENST00000567549 POPDC2Q9HBU9 364 aa19.3■□□□□ 0.68
LINC01238-205ENST00000567549 KIAA1522Q9P206 1035 aaPredicted RBP19.3■□□□□ 0.68
LINC01238-205ENST00000567549 CNTN6Q9UQ52 1028 aa19.3■□□□□ 0.68
LINC01238-205ENST00000567549 CEP83Q9Y592 693 aa19.3■□□□□ 0.68
LINC01238-205ENST00000567549 PPP1R3GB7ZBB8 358 aa19.29■□□□□ 0.68
LINC01238-205ENST00000567549 SH3BP5O60239 455 aa19.29■□□□□ 0.68
LINC01238-205ENST00000567549 SRPRAP08240 638 aaKnown RBP19.29■□□□□ 0.68
LINC01238-205ENST00000567549 CD44P16070 742 aaKnown RBP19.29■□□□□ 0.68
LINC01238-205ENST00000567549 GRIA4P48058 902 aa19.29■□□□□ 0.68
LINC01238-205ENST00000567549 RPL34P49207 117 aaKnown RBP19.29■□□□□ 0.68
LINC01238-205ENST00000567549 SLC12A1Q13621 1099 aa19.29■□□□□ 0.68
LINC01238-205ENST00000567549 FAM133BQ5BKY9 247 aaKnown RBP19.29■□□□□ 0.68
LINC01238-205ENST00000567549 RFWD3Q6PCD5 774 aa19.29■□□□□ 0.68
LINC01238-205ENST00000567549 ADAT2Q7Z6V5 191 aaKnown RBP19.29■□□□□ 0.68
LINC01238-205ENST00000567549 ATP6V0D2Q8N8Y2 350 aa19.29■□□□□ 0.68
LINC01238-205ENST00000567549 DQX1Q8TE96 717 aaKnown RBP19.29■□□□□ 0.68
LINC01238-205ENST00000567549 TTC17Q96AE7 1141 aa19.29■□□□□ 0.68
LINC01238-205ENST00000567549 BTN2A3PQ96KV6 586 aa19.29■□□□□ 0.68
LINC01238-205ENST00000567549 SRRTQ9BXP5 876 aaKnown RBP19.29■□□□□ 0.68
LINC01238-205ENST00000567549 THAP9Q9H5L6 903 aa19.29■□□□□ 0.68
LINC01238-205ENST00000567549 UBE2TQ9NPD8 197 aaPredicted RBP19.29■□□□□ 0.68
LINC01238-205ENST00000567549 PRSS16Q9NQE7 514 aa19.29■□□□□ 0.68
LINC01238-205ENST00000567549 TM7SF3Q9NS93 570 aa19.29■□□□□ 0.68
LINC01238-205ENST00000567549 TMEM51Q9NW97 253 aa19.29■□□□□ 0.68
LINC01238-205ENST00000567549 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.29■□□□□ 0.68
LINC01238-205ENST00000567549 STIM2Q9P246 746 aa19.29■□□□□ 0.68
LINC01238-205ENST00000567549 ZMIZ1Q9ULJ6 1067 aa19.29■□□□□ 0.68
LINC01238-205ENST00000567549 USP24Q9UPU5 2620 aa19.28■□□□□ 0.68
LINC01238-205ENST00000567549 TARSL2A2RTX5 802 aaKnown RBP19.28■□□□□ 0.68
LINC01238-205ENST00000567549 PIK3R2O00459 728 aa19.28■□□□□ 0.68
LINC01238-205ENST00000567549 THAP12O43422 761 aa19.28■□□□□ 0.68
LINC01238-205ENST00000567549 LETM1O95202 739 aaPredicted RBP19.28■□□□□ 0.68
LINC01238-205ENST00000567549 CD27P26842 260 aa19.28■□□□□ 0.68
LINC01238-205ENST00000567549 GNA15P30679 374 aa19.28■□□□□ 0.68
LINC01238-205ENST00000567549 GPD2P43304 727 aa19.28■□□□□ 0.68
LINC01238-205ENST00000567549 YWHAZP63104 245 aaKnown RBP19.28■□□□□ 0.68
LINC01238-205ENST00000567549 SULT2A1Q06520 285 aa19.28■□□□□ 0.68
LINC01238-205ENST00000567549 ARID5BQ14865 1188 aa19.28■□□□□ 0.68
LINC01238-205ENST00000567549 PTPRNQ16849 979 aa19.28■□□□□ 0.68
LINC01238-205ENST00000567549 MS4A13Q5J8X5 152 aa19.28■□□□□ 0.68
LINC01238-205ENST00000567549 GLRX5Q86SX6 157 aa19.28■□□□□ 0.68
LINC01238-205ENST00000567549 SCUBE3Q8IX30 993 aa19.28■□□□□ 0.68
LINC01238-205ENST00000567549 CARNMT1Q8N4J0 409 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms