RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 ZNF512Q96ME7 567 aaPredicted RBP11.88□□□□□ -0.51
CDH1-210ENST00000566612 RRAGCQ9HB90 399 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 NT5MQ9NPB1 228 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 ACSS2Q9NR19 701 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 C15orf41Q9Y2V0 281 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 IPPQ9Y573 584 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 TIMM44O43615 452 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 ANXA9O76027 345 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 VHLP40337 213 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 GRIA1P42261 906 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 BNIP1Q12981 228 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 PARP6Q2NL67 630 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 ANO4Q32M45 955 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 ACCSLQ4AC99 568 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 SCARA3Q6AZY7 606 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 ADGRD1Q6QNK2 874 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 NAF1Q96HR8 494 aaKnown RBP11.88□□□□□ -0.51
CDH1-210ENST00000566612 SERAC1Q96JX3 654 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 RNF39Q9H2S5 420 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 TAGLN3Q9UI15 199 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 SLX4Q8IY92 1834 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 TYW5A2RUC4 315 aaKnown RBP11.88□□□□□ -0.51
CDH1-210ENST00000566612 PRPF4O43172 522 aaKnown RBP eCLIP11.88□□□□□ -0.51
CDH1-210ENST00000566612 DCXO43602 365 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 UGT1A9O60656 530 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 AXLP30530 894 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 MRPS5P82675 430 aaKnown RBP11.88□□□□□ -0.51
CDH1-210ENST00000566612 TSTA3Q13630 321 aaPredicted RBP11.88□□□□□ -0.51
CDH1-210ENST00000566612 LINC00523Q86TU6 105 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 RNF148Q8N7C7 305 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 KCTD15Q96SI1 283 aaPredicted RBP11.88□□□□□ -0.51
CDH1-210ENST00000566612 TSC22D3Q99576 134 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 TRIM4Q9C037 500 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 UGT1A7Q9HAW7 530 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 UGT1A10Q9HAW8 530 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 UGT1A8Q9HAW9 530 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 CYTH4Q9UIA0 394 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 KIAA1551Q9HCM1 1747 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 ENO4A6NNW6 628 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 C2CD2LO14523 706 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 PDE5AO76074 875 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 METTL18O95568 372 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 CNTFP26441 200 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 SLC25A11Q02978 314 aaKnown RBP11.87□□□□□ -0.51
CDH1-210ENST00000566612 RAB6CQ53S08 254 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 RAB6CQ9H0N0 254 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 TRPV6Q9H1D0 765 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 MAN1C1Q9NR34 630 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 PACSIN3Q9UKS6 424 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 ST3GAL5Q9UNP4 418 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 ACOT9Q9Y305 439 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 PSMD3O43242 534 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 MFSD11O43934 449 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 SERPINE1P05121 402 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 NFKB1P19838 968 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 IVDP26440 423 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 TUBP50607 506 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 GPX6P59796 221 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 FAM117BQ6P1L5 589 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 TAF2Q6P1X5 1199 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 TAS2R42Q7RTR8 314 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 PTAR1Q7Z6K3 402 aaPredicted RBP11.87□□□□□ -0.51
CDH1-210ENST00000566612 NAT8LQ8N9F0 302 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 SHCBP1Q8NEM2 672 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 SMARCD1Q96GM5 515 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 IL1RL2Q9HB29 575 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 ARL8BQ9NVJ2 186 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 SYBUQ9NX95 663 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 AAR2Q9Y312 384 aaKnown RBP11.87□□□□□ -0.51
CDH1-210ENST00000566612 ZMPSTE24O75844 475 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 STBD1O95210 358 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 STMN1P16949 149 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 CSHL1Q14406 222 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 SNX30Q5VWJ9 437 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 CDCA2Q69YH5 1023 aaPredicted RBP11.87□□□□□ -0.51
CDH1-210ENST00000566612 C6orf89Q6UWU4 347 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 ADAM2Q99965 735 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 DUSP16Q9BY84 665 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 R3HDMLQ9H3Y0 253 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 CHKBQ9Y259 395 aa11.87□□□□□ -0.51
CDH1-210ENST00000566612 HACD1B0YJ81 288 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 AP3B1O00203 1094 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 LGR5O75473 907 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 ZCCHC18P0CG32 403 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 GRK2P25098 689 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 BRCC3P46736 316 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 PLK1P53350 603 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 CDH17Q12864 832 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 SOWAHAQ2M3V2 549 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 KRT80Q6KB66 452 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 CLNKQ7Z7G1 428 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 IFNEQ86WN2 208 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 TMPRSS6Q8IU80 811 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 DCP1BQ8IZD4 617 aaKnown RBP11.86□□□□□ -0.51
CDH1-210ENST00000566612 DEFB107AQ8IZN7 70 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 NIPA2Q8N8Q9 360 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 CERS2Q96G23 380 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 MAML3Q96JK9 1138 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 EFHD1Q9BUP0 239 aa11.86□□□□□ -0.51
CDH1-210ENST00000566612 SUDS3Q9H7L9 328 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms