RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 GANQ9H2C0 597 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 ADNPQ9H2P0 1102 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 DENND2DQ9H6A0 471 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 EHMT1Q9H9B1 1298 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 UCK1Q9HA47 277 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 RSAD1Q9HA92 442 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 FBRSQ9HAH7 460 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 RC3H2Q9HBD1 1191 aaKnown RBP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 SPON1Q9HCB6 807 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 SLC40A1Q9NP59 571 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 SLC39A2Q9NP94 309 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 PDLIM7Q9NR12 457 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 SEMA3GQ9NS98 782 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 KLC4Q9NSK0 619 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 RBM12Q9NTZ6 932 aaKnown RBP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 PANK4Q9NVE7 773 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 EHD2Q9NZN4 543 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 EMC3Q9P0I2 261 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 AMACRQ9UHK6 382 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 SLC12A6Q9UHW9 1150 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 CCNL1Q9UK58 526 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 TRPC5Q9UL62 973 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 SCAF8Q9UPN6 1271 aaKnown RBP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 EXOC7Q9UPT5 735 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 SATB2Q9UPW6 733 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 ZFP37Q9Y6Q3 630 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 DUSP10Q9Y6W6 482 aa5.35□□□□□ -1.55
CAPN3-214ENST00000565274 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 BAZ2BQ9UIF8 2168 aaKnown RBP5.35□□□□□ -1.55
CAPN3-214ENST00000565274 LY75O60449 1722 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 THSD7AQ9UPZ6 1657 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 AFF2P51816 1311 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 A0A0B4J269 797 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 HTR3EA5X5Y0 456 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 SLC9B1P1A6NJY1 282 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 PRR5-ARHGAP8B1AHC4 643 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 PSMD9O00233 223 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 AP3D1O14617 1153 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 TXNL1O43396 289 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 SMPD2O60906 423 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 PPP1R11O60927 126 aaPredicted RBP5.34□□□□□ -1.55
CAPN3-214ENST00000565274 AOC2O75106 756 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 DNAJC8O75937 253 aaPredicted RBP5.34□□□□□ -1.55
CAPN3-214ENST00000565274 TDP2O95551 362 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 TBX18O95935 607 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 PLGP00747 810 aaPredicted RBP5.34□□□□□ -1.55
CAPN3-214ENST00000565274 KRT14P02533 472 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 APOA4P06727 396 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 RETP07949 1114 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 ABCB1P08183 1280 aaPredicted RBP5.34□□□□□ -1.55
CAPN3-214ENST00000565274 PLEKP08567 350 aaPredicted RBP5.34□□□□□ -1.55
CAPN3-214ENST00000565274 FAM87AP0C7U9 286 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 GOLGA8HP0CJ92 632 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 GAP43P17677 238 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 RPA1P27694 616 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 HOXA11P31270 313 aaPredicted RBP5.34□□□□□ -1.55
CAPN3-214ENST00000565274 SHMT1P34896 483 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 PTGS2P35354 604 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 ADCY8P40145 1251 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 CD96P40200 585 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 CRKP46108 304 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 OR1G1P47890 313 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 CARSP49589 748 aaKnown RBP5.34□□□□□ -1.55
CAPN3-214ENST00000565274 ALDH3A2P51648 485 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 SLC12A3P55017 1021 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 SSTP61278 116 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 POLR2GP62487 172 aaKnown RBP eCLIP5.34□□□□□ -1.55
CAPN3-214ENST00000565274 GUCY1A3Q02108 690 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 SPIRE1Q08AE8 756 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 C17orf67Q0P5P2 114 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 CUL1Q13616 776 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 RFTN1Q14699 578 aaPredicted RBP5.34□□□□□ -1.55
CAPN3-214ENST00000565274 SPCS2Q15005 226 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 SNCBQ16143 134 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 CNGA2Q16280 664 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 PPP2R5EQ16537 467 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 ANKRD20A8PQ5CZ79 823 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 FBXO48Q5FWF7 155 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 RPS26P11Q5JNZ5 115 aaPredicted RBP5.34□□□□□ -1.55
CAPN3-214ENST00000565274 CFAP157Q5JU67 520 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 MFSD14BQ5SR56 506 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 RPUSD3Q6P087 351 aaKnown RBP5.34□□□□□ -1.55
CAPN3-214ENST00000565274 CYB5D1Q6P9G0 228 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 SHQ1Q6PI26 577 aaKnown RBP5.34□□□□□ -1.55
CAPN3-214ENST00000565274 SLC30A9Q6PML9 568 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 SLC2A7Q6PXP3 512 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 SEZ6L2Q6UXD5 910 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 MEX3BQ6ZN04 569 aaKnown RBP5.34□□□□□ -1.55
CAPN3-214ENST00000565274 AGMOQ6ZNB7 445 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 RGS9BPQ6ZS82 235 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 CCDC121Q6ZUS5 278 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 KCNK18Q7Z418 384 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 IRF2BP2Q7Z5L9 587 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 ADGRF4Q8IZF3 695 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 SYCP3Q8IZU3 236 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 RASGEF1CQ8N431 466 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 XXYLT1Q8NBI6 393 aa5.34□□□□□ -1.55
CAPN3-214ENST00000565274 FBXO15Q8NCQ5 510 aaPredicted RBP5.34□□□□□ -1.55
CAPN3-214ENST00000565274 ETNPPLQ8TBG4 499 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms